Piph027720.1
Basic Information
- Insect
- Polyommatus iphigenia
- Gene Symbol
- -
- Assembly
- GCA_963422495.1
- Location
- OY730188.1:9497471-9499491[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-11 3.9e-08 33.9 0.0 2 42 15 55 14 58 0.95
Sequence Information
- Coding Sequence
- ATGTCGGCAGAGAAAAAGAAAAGGAAATATTATTCTTGGAATGAAACTAGTATGAAACTCGCTATAGAatctttaagaaaaaaaactattgGATTAAATGAAGCGAGTCGAATCTATGGCGTTCCAAAAGCCACATTAAAAAGAAGATTGGACGGGAAAAACCAAAAAGCTATCGAAGAAGTTCAGATAGTGGGATCAGAAGGAGATCTCCCTGAAGCTTTAGAAACTGAATTAAGGAATCACATTGTTGAAATGGAGAATTCTTTGTTTGGTATTACTCCCAAAGATGTCAGAGAGCTTGCCTTCCAATTTGCTGAGAAAAATAAGATTAAAAATCGTTTTAATAAAACCAAAAAAGCTGCAGGGAAAAAATGGTACTATGCATTCATGAAGCGCCATCCAGATATAAGTCTCCGTCAACCAAGAGCCACATCTATGAGCAGGGCAACTGGATTTAATAAGGAGACGGTAAAAGACTTCTTTGATAAATTGGAAGACATAATGGACACGAACGATTTACATGACCCTCAGCGAATTTTCAACATGGACGAGACAGGTTTGTCAACTGTCCAGAAGAAGCCTCGAAAAATATTAGCTCTGAAAGGGAAGCGCCAAGTGGGTTCCATAACTAGTGGTGAAAGGGGTGTAACGACCACTGCTGTATGTTGCGCAAGTGCTGCTGGGTTTTTTGTGCCACCGCTTATAATTTTTAAACGTAAAAGAGCAAAAGACGAGCTACGGGATGGGGCTCCTCCTGGAACGATATTTGCATTTAATCCTGACAGTGGATTCATTAACAAAGAGATTTTTACATTGTGGTTGCAACATTTCGTGGAAACTGTGAAACCGACTCCTGAAAAGAAAGTTTTGCTTGTGCTAGATGGACACACAAGCCACACAAAAAATCTGGAAGCAATAACATATGCAAAGGCACACAACCTCATATTGCTTTCATTGCCTGCACACACGACACACAAATTACAACCTCTTGATGTGTCGTTTTTTAAGCCCCTAAGCCTTTACTACATTGAAGAAACAGAAAAATGGCTGCGTCAGAATCCAGGCAGAGTTGTCACAACTTTCCAAGTATCTATGCTTTTTGGCAAAGCTTATTCTCGAGCTGCATCTGTTGGCACTGCTGCAAATGGCTTTTCAAAAACAGGCATATTCCCGCtgaacaaaaatgtttttgctgACTATGAATTCATAGAACCTCATGATGAGACAAATCAGAATGTCCCAGCTCAAAACGAAATTGATCCCCTATCTACGATTTCACCGGAAATTCCGGACACGGAGCCTGTCGTTACTTTACCCGAACTGGAACATCGAGGGCAAAATGATTTACCAGCAGAAATAGCATCAACAAATGAAGGAGTCGCCAAGACTCATAAAGGTGCAGATGAACAggaaaaaaacctaacagaACCAGGTAAAGAAAAAGACGCAGCCAAGACAAATGAAGATATTAATAACGATGCTTCTCCAGCAAAGAAACGTAAATCTACCTCAGAATACTCATTCCATATAGACCAGATATCTCCAGGATCCAAATTAATTGCCAAACAGTTGCGCCAAAAATGTCGTAAAGCTCAAAATAGTTTGGAATTAACCTCGTCACCGTACAAAGCCACCCTGGAGCAAGTGCAAGCTAAAGTGAAAAAACCAAAAATGCAAAAGCTCACTGCTAAAAATAAAGAACCTAAACCATCAACTAGCAAGAAGGCAAAAACAGAAGTAGATATTGAAAAATGGTTCTGCAAGCTATGTCTTCAGTGCGAAGTAGAAGACATGATAAAGTGCCAGATTTGTAATGCATGGGTACACGTGCATTGTGCCTGCGTCAACAAGAATGCCAAAAAGTTTATATGTCCTCTGTGcaagacttaa
- Protein Sequence
- MSAEKKKRKYYSWNETSMKLAIESLRKKTIGLNEASRIYGVPKATLKRRLDGKNQKAIEEVQIVGSEGDLPEALETELRNHIVEMENSLFGITPKDVRELAFQFAEKNKIKNRFNKTKKAAGKKWYYAFMKRHPDISLRQPRATSMSRATGFNKETVKDFFDKLEDIMDTNDLHDPQRIFNMDETGLSTVQKKPRKILALKGKRQVGSITSGERGVTTTAVCCASAAGFFVPPLIIFKRKRAKDELRDGAPPGTIFAFNPDSGFINKEIFTLWLQHFVETVKPTPEKKVLLVLDGHTSHTKNLEAITYAKAHNLILLSLPAHTTHKLQPLDVSFFKPLSLYYIEETEKWLRQNPGRVVTTFQVSMLFGKAYSRAASVGTAANGFSKTGIFPLNKNVFADYEFIEPHDETNQNVPAQNEIDPLSTISPEIPDTEPVVTLPELEHRGQNDLPAEIASTNEGVAKTHKGADEQEKNLTEPGKEKDAAKTNEDINNDASPAKKRKSTSEYSFHIDQISPGSKLIAKQLRQKCRKAQNSLELTSSPYKATLEQVQAKVKKPKMQKLTAKNKEPKPSTSKKAKTEVDIEKWFCKLCLQCEVEDMIKCQICNAWVHVHCACVNKNAKKFICPLCKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01507995; iTF_01248024; iTF_01248022; iTF_01248023;
- 90% Identity
- iTF_01248023;
- 80% Identity
- -