Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963422495.1
Location
OY730188.1:11791523-11838976[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7e-12 1.4e-08 36.0 0.0 2 89 360 434 359 434 0.88

Sequence Information

Coding Sequence
ATGAAGTCTTGCGTGGATTCTGACCGGCTATATGAATCTTGCGTGGATTCTGACAGGCTGGTGGGCGCTCCGTGCGGGCAGCACGGCCAGTACACGTTCTACAAGGCGATCAAGCTGACGGGCCTCCTGGAGCGGATAGTCGCCATCGGGGACTTCTTCTTCGTCAAGATATGGCAGGACTCCGAGCTCATCTCCATAGGTATGCACACTGCACAGTCTCTCTCTAGTAGATCAAGCGAGCTGCAGCTGCTGTGGACGGACCGCGTGGCGGACCAGACGCTGGTGTCGCTGCGGCTGTACTTCCTGCCGGAGAACACGCCCGACGGCCGCGGACAGCACGGCGAGCACGAGGTGTTAGCCATCAACGACAAGGTGGTGTTGCGCGCGGAGGACCTGCTGAGCTGGGTGTGCGTGGGGCGCGAGTGGCGGTGGGGGCTGCGCGCGGTGTGGCGCGGAGACTGCgccccgcccgcgccgccctcccccgccgccgcgccgcccgcccccCACACTGCGCCGCTGCACCACACCAGGCTGGACTTCAGCGATGTGGAGAAGGAGAAGAGCGCCATCACGATAGACGAGGAGGCGCCGGGCGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGGTACCGGGCGCTGGTGGCGCGGCTGGAGGGCATCCAGGCGCGCTGGCTGCGGGACTCGCTCGTCGCCGCGCTCGGCGGGTACGCCGCGCCCACCAAGAACACACGGATATTGTATTGTAAGGACACATTCGAGTACCCCGAGCTGGAGGGGCACGAGTTCGTGTGCAATCACCTGTCGCCGAAGCTGAAGGGGCGGCCGCGGGGACGCCGGCGCCGCGCCGCAGACCGCTCGCCCGGCCGCTCGCCAGGCCGCTCGCCCGCGCGCTCCGACTCCAGATCTAGCGAATCCGACGGACGACACACGCCAGATAACAAGACGCACAGACGACTCTCCCTCCGGAACGGGCCGGACAAAGAGAGAGGGCCGGACAAGGAGAGACGGCCGGACAAGGAGAGAGGGTCGGATGACGTAACGGCGGAGAACGGGGAGGCGCGGCCGAGCCCCGAGGACGAGGCGTTCATGTCGCAGCTGATACACTTCTACCGCGACAAGAGCGACACGCTCAAGATCGCGCACACGCTCAAACACATGTCGCTGCGACTGATCTACCTGGGCGTGGTGTCGCGCGGCGGGTACGAGGCGGTCTGCCGCGACAAGTTGTGGCGACACCTCTACGCCGACCTCGGCCCGCGCGTGCGACGCCTGTACGAGAGATGTCTCCTCCCCTTCGAGAACCACGAGCGGCGGCTCAGCAAGAAGTACATGAAGGGGCTGAACGGCAAGGTGGAGGAGAAGGCGGAACCCATTGAAGTGGGGGACTCCCCCCTGCGCGGCGACAAGCGCCTGCgcaccccctccccccacctcgACAACGAGACGGGGGAAGTCCTCAAGGACGACATCACGGTCACGTCAAAACCGGCGGAGGAGCTCAACCGCGAGTTCCTGGACTCCCTCCCCGAGCCCGACAAGCCCGTCAAGATCTCCGTCAAGCCGGTAGAGAAGCTGATAGAACCTGGACTCAAGAGCGATGCGTTTGACGCCGAATACAAGGACAAGGACGACGACAAGCGAGACGGCTACGACGCACACAAATATATCGGCAACTCGGAGGGCGGAGTCGGGGGGGCGTGGCGCGTCCcgcccgcgcgcgcgccgctcGCCGACCTCGGCCCGCTCGCCGCGCTCACCGACAATCACAACGGACACGCCCAGAAGAGTCGTCCGGCGGGGCGGAGCTCCCTGCGCGCGGTGCGGGTGAAGCCGGCGCGGCCCCCGCCTCACCCCGCGCCGCACCCCGCCCCCCCCAGCACGCAGCCTGCGCCGACGTCATCCGGCCGACCGGGTCCCTCCCCGCCCAACAACTTCGGCATCCACCACCCGCCGCCGCCCGCACCCCCCGCGCAGCCGCCCGCCCCCGCCCAGCCCGCGCCGCCTCACAGCGACGACGACATCGTCGAGGTCCCCTACAAGCCGAAGAGCCCCGAGATTATCGACCTCGACGAGTACCCGGAGAGCCCGCAGGCCGGCAAGCGGCGCAAGCTGGACATCCTGAAGGAGCGCGGGCTGGAGGTGACGGCCGTGCCGCCGGCGTGGGGCGCCGTGCCGCTCCCCGGCGCCGTGCCGCTGCCGGGCGCCGTGCCGCTGCTGCCCGCGCCGCTGCTGCACCCGCTGCTGGCGCCGGCGCAGCTCTACCAGATGTACAACATCCTGCCACCCTCCTACCCCAACGGCGCGCCGGCGCCCAAGGTGATCCAGGCCGTGAGCGCGTTCGGCACCGCCGGGCCCGAGAAGACCGTGTACGGCAACCCCAAGGACCCGTTCATGCCGCCGCCGCACGTGCTGGGCTGCGCGCCCCTGCGCCCGCGCCCGCTCTCCCCGCCCGCGCGCGACGTGCTCGACCTCACCTGCCCGCCGCCCGAGCGCGGCGCCCTCGAGATCGTGCGCGTGCCCTCCGCCCCCTCGCCCGCCGCCCCCGCGCCCTCCGCGCACCCCGCCGCGCAGAACCTCGCCAAGAACTACACGCTGCTGGACGGCAAGGCCATGGTCGGCTCCAACCTGGAGATCACGCTGGTCGACCCCAAGGCGCAGACCCCGCCCAAGCAGCGGCTGCCGCAGAAGCGCAACTCGAACGGCAAATTCGCGGCGAAGACGCCGACGCCGCCACGCGAGCCCCGCTACCCGCCGGCGTCGCCGTCCGGCAAGCGCGCGCCGCCCCCCCCGGCGCGGGACGAGTCGCCCACCGGCTCGACGGGGTCGCGCGACTCCGCCTCGTCGGGCTTCCTCAACGCGTACAAGGCGCCGGgcggggcgggcggcgcggcgggggcGGGGCTGGCGCTCGACCCGCTGTACGTGAGCTCGCTGTACGGCGGGCTGGGCGGCGGGCTGGGCGGCGCGCTGGGCGGCGCGATGGGCGGGCTGGGTGGGCTGGACCAGCGGCAGCTCGCAATGTACCGCGAGTTCGTGGCGTCGCAGTTCCGCGGCTACTCGGGGCTGCTCAACATCGGCCCGCCCACCACCAAGAATTAG
Protein Sequence
MKSCVDSDRLYESCVDSDRLVGAPCGQHGQYTFYKAIKLTGLLERIVAIGDFFFVKIWQDSELISIGMHTAQSLSSRSSELQLLWTDRVADQTLVSLRLYFLPENTPDGRGQHGEHEVLAINDKVVLRAEDLLSWVCVGREWRWGLRAVWRGDCAPPAPPSPAAAPPAPHTAPLHHTRLDFSDVEKEKSAITIDEEAPGVVVFSYPRYCRYRALVARLEGIQARWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLSPKLKGRPRGRRRRAADRSPGRSPGRSPARSDSRSSESDGRHTPDNKTHRRLSLRNGPDKERGPDKERRPDKERGSDDVTAENGEARPSPEDEAFMSQLIHFYRDKSDTLKIAHTLKHMSLRLIYLGVVSRGGYEAVCRDKLWRHLYADLGPRVRRLYERCLLPFENHERRLSKKYMKGLNGKVEEKAEPIEVGDSPLRGDKRLRTPSPHLDNETGEVLKDDITVTSKPAEELNREFLDSLPEPDKPVKISVKPVEKLIEPGLKSDAFDAEYKDKDDDKRDGYDAHKYIGNSEGGVGGAWRVPPARAPLADLGPLAALTDNHNGHAQKSRPAGRSSLRAVRVKPARPPPHPAPHPAPPSTQPAPTSSGRPGPSPPNNFGIHHPPPPAPPAQPPAPAQPAPPHSDDDIVEVPYKPKSPEIIDLDEYPESPQAGKRRKLDILKERGLEVTAVPPAWGAVPLPGAVPLPGAVPLLPAPLLHPLLAPAQLYQMYNILPPSYPNGAPAPKVIQAVSAFGTAGPEKTVYGNPKDPFMPPPHVLGCAPLRPRPLSPPARDVLDLTCPPPERGALEIVRVPSAPSPAAPAPSAHPAAQNLAKNYTLLDGKAMVGSNLEITLVDPKAQTPPKQRLPQKRNSNGKFAAKTPTPPREPRYPPASPSGKRAPPPPARDESPTGSTGSRDSASSGFLNAYKAPGGAGGAAGAGLALDPLYVSSLYGGLGGGLGGALGGAMGGLGGLDQRQLAMYREFVASQFRGYSGLLNIGPPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00403554;
90% Identity
iTF_00403554;
80% Identity
-