Pfla011044.1
Basic Information
- Insect
- Polymixis flavicincta
- Gene Symbol
- GATA4
- Assembly
- GCA_949987655.1
- Location
- OX465176.1:9396366-9408465[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 2.4e+04 -3.5 0.1 12 19 9 16 8 17 0.81 2 2 1.6e-18 1.6e-14 54.6 2.2 1 35 80 113 80 114 0.98
Sequence Information
- Coding Sequence
- ATGGATTCCGGCATGAACGGTGAGTGGCACAGTTCAGGCCGCGGTTCGAGCGTGGCGGGCACGGCGCGAAGAAAACAAAGCTTCCCTGCACGAGCACAGCCTCTTATGGCCGTAGACCCGCCCGCTACCAACACACAATGGCCACAAACAGCGTCTGAAAatCAGGAACCTCCAGAAGCATCATCAACACCAGGCGGCGGGGGCTCCACTCGCTCGGGTCCTCGCGTCGAACTCTCTTGCAGTAACTGCGGCACACACACCACGACAATATGGCGGCGCGACGCGCGCGGTGAGATGGTCTGCAACGCGTGCGGACTGTACTTCAAGCTGCACGGAGTTCCGCGACCTACGGCTATGCGACGTGATACTATACACACGCGACGTCGCAGACCGAGACATGATGGCAAGCACACTAAGAGCAAAACTCGGCGCGCCGGCGGCGGgcccggcggcggcgaggcgtgCTCGCCGGGCGAGGGCGCGGGCAGCGGCGGCGAGGGCGCGGAGGAGGCCGTGCTGGCCGCGCTGCGTCGCCAGCTGCAGCCGCACCTGCTGGCGGCGCTGCACGCGCACAACACGCGCGCCGTGCGCCCGCATCGCGAACAGGTCGGTCTGAACGCTCCCGAGTACGACGAGGCGCCGCTGAACCTAGTAGCCAGCCACGTAGCCGCCGCCGAAGAATCGCACTGA
- Protein Sequence
- MDSGMNGEWHSSGRGSSVAGTARRKQSFPARAQPLMAVDPPATNTQWPQTASENQEPPEASSTPGGGGSTRSGPRVELSCSNCGTHTTTIWRRDARGEMVCNACGLYFKLHGVPRPTAMRRDTIHTRRRRPRHDGKHTKSKTRRAGGGPGGGEACSPGEGAGSGGEGAEEAVLAALRRQLQPHLLAALHAHNTRAVRPHREQVGLNAPEYDEAPLNLVASHVAAAEESH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01173845;
- 90% Identity
- iTF_01441601;
- 80% Identity
- -