Pcas002725.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- GATA-B
- Assembly
- GCA_038024825.1
- Location
- CP149045.1:11337258-11355472[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4 3.4e+03 -1.9 0.3 6 15 193 202 193 208 0.76 2 3 8e-19 1.9e-15 56.5 1.8 1 34 313 345 313 347 0.97 3 3 1.1e-17 2.7e-14 52.8 5.4 1 34 382 414 382 416 0.97
Sequence Information
- Coding Sequence
- ATGCTCCACGAAACGTGGCCCTGTACCAACAGCGTAGCTGTTCCATGGCTCAAAACAGAAATCTGTGAACTGGACGCTCTCATAGCAGAAGTCAACAATAACTGCTTTAAAGAGGGCGAGACGGAGTGCGGCACGGAGGGAGCGGGCGAGGGCGCGGGCGGCGAGGCAGAAAGCCCGCCCCCCCTACCGACGTTCGGCTACGCCCACCAGGGCAGTATGTCTCCGTCCCACTCACGCAGCTACCAAGAGCTGCGGCCAGCGGCGGCACATGCACGCGACATGCAGACCTACACGCACCTAGAGGAGGCCCTGTTCAAGCCGACCGCGAGCGCTGCTGGCTCCACCGACGGCGTTGTCTTCATACGAGGCCGTACCCCGGAGCTGAGCCCGTCGCCCGAGCGCCGCGAGGACTATCGCCCAATCCACTACGACCACTATCCATCAGCGCCGCCGTCAGCTTACTCCCATGAACATCATCATCACGTCGACGGAGGCGGCGGTGGTGGAGGTAGCGCCGTCTACACGCGATGCGGATATCCAGGCGGATCGCCATATTTTGGAAATGGAGCTGAGCTCACGACACAGACACCAATTTGGAGCGCCAGCGCAGGAGGATCGCCGACGTACGGCGGATCCAGTGGCAGTGCGCCTGGAGTGGTGCTCCCTGAAGAGTATGGAGAAAGCCCAGGAGGAGGAAGTGGTGGTGGCGCTGGAAGCTCACCCGGAGGCTCTCTGCCCTCCTTCAACGCGCGCTTCGGAGGGACCTTTGCGTGTGCGACCTCGCGACCTTCCGTCTACAGCACCCCCGGTTTGACCACCAGCCCATATCATCAGGAAGTGTGGAATTCTCTAGAGGGCAACCGACGGGGTATTTCTGCCGCTGCCAGCCTCTCAGCATTCGAGGTGTCGGCGGAGTTTTTCACGGAGGGGCGCGAATGCGTGAATTGCGGCGCCATCGACACGCCGCTGTGGCGGCGCGACGGCACGGGCCATTACCTCTGCAATGCTTGCGGACTCTACTACAAGATGAACGGCATCAACCGGCCGCTCAAGCAGCCGCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCATGCCCGCACCCGCCAACGACATGGGTACAAAGAGACCGGGCATGTCGTGCAGTAACTGTCAAACGAAGATGACTTCGTTATGGCGTCGCAATGAGCATGGTGAGACAGTTTGTAATGCCTGCGGCCTCTACTACAAACTGCACCATATAAACCGTCCCATCGCCATGAAGAAAGACTCAATACAGACAAGAAAACGCAAACCTAAGAACAGCCTTAAATCTGAACGAAGTTTAAAGAACCTGGTACAGAACGCTCACTCCGGAAACAATGCCATAAAGATAGAAAATCTGATGGAGAGCGGCTCAGTGTCGTCGCCAAGCGTGAGCGAGACGCGGTCGGCGCTGACGCTGGGATACTACGTGCAACAGCAGCCGTTAAAGATGGAGGAGCCTCCACCGGCGCACGCACACGGACTCCCTCACCATGCGCACGCACACGCGCACCCGCACGCAcacgcgcacgcgcacgcacacgcactctACGACGACGAGTACCGGCGCGCCGCCGCCACAGAACCCGCCGACCGACTCGACCGCCCGACAGTCGTCTCCATGGGCAGCTGA
- Protein Sequence
- MLHETWPCTNSVAVPWLKTEICELDALIAEVNNNCFKEGETECGTEGAGEGAGGEAESPPPLPTFGYAHQGSMSPSHSRSYQELRPAAAHARDMQTYTHLEEALFKPTASAAGSTDGVVFIRGRTPELSPSPERREDYRPIHYDHYPSAPPSAYSHEHHHHVDGGGGGGGSAVYTRCGYPGGSPYFGNGAELTTQTPIWSASAGGSPTYGGSSGSAPGVVLPEEYGESPGGGSGGGAGSSPGGSLPSFNARFGGTFACATSRPSVYSTPGLTTSPYHQEVWNSLEGNRRGISAAASLSAFEVSAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYYKMNGINRPLKQPRRLVRQRHAAHAMPAPANDMGTKRPGMSCSNCQTKMTSLWRRNEHGETVCNACGLYYKLHHINRPIAMKKDSIQTRKRKPKNSLKSERSLKNLVQNAHSGNNAIKIENLMESGSVSSPSVSETRSALTLGYYVQQQPLKMEEPPPAHAHGLPHHAHAHAHPHAHAHAHAHALYDDEYRRAAATEPADRLDRPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -