Basic Information

Insect: Polylopha cassiicola
Gene Symbol: Zbtb41
Assembly: GCA_038024825.1
Location: CP149059.1:442698-445824[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00091 0.052 14.4 0.1 2 23 145 166 144 166 0.97

2 11 0.00039 0.022 15.6 1.4 1 23 172 195 172 195 0.96

3 11 0.00011 0.0064 17.3 0.6 1 23 202 224 202 224 0.99

4 11 5e-05 0.0028 18.4 1.0 1 23 230 252 230 252 0.98

5 11 0.0037 0.21 12.5 0.4 1 23 258 280 258 280 0.94

6 11 1.8e-05 0.001 19.8 2.4 1 23 286 308 286 308 0.98

7 11 1.8e-06 0.00011 22.9 1.1 3 23 316 337 315 337 0.97

8 11 0.014 0.81 10.7 0.3 2 23 343 361 342 361 0.85

9 11 0.00094 0.053 14.4 4.7 1 23 367 390 367 390 0.93

10 11 0.018 1 10.3 0.4 1 23 396 421 396 421 0.94

11 11 3.3e-05 0.0019 19.0 2.8 1 23 427 450 427 450 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00091	0.052	14.4	0.1	2	23	145	166	144	166	0.97
2	11	0.00039	0.022	15.6	1.4	1	23	172	195	172	195	0.96
3	11	0.00011	0.0064	17.3	0.6	1	23	202	224	202	224	0.99
4	11	5e-05	0.0028	18.4	1.0	1	23	230	252	230	252	0.98
5	11	0.0037	0.21	12.5	0.4	1	23	258	280	258	280	0.94
6	11	1.8e-05	0.001	19.8	2.4	1	23	286	308	286	308	0.98
7	11	1.8e-06	0.00011	22.9	1.1	3	23	316	337	315	337	0.97
8	11	0.014	0.81	10.7	0.3	2	23	343	361	342	361	0.85
9	11	0.00094	0.053	14.4	4.7	1	23	367	390	367	390	0.93
10	11	0.018	1	10.3	0.4	1	23	396	421	396	421	0.94
11	11	3.3e-05	0.0019	19.0	2.8	1	23	427	450	427	450	0.98

Sequence Information

Coding Sequence: ATGGACGTAAAATTGTGTCGTATTTGCCTCTCCAAGTCCGGCGAAGTTTCGCTATTTGATAAACAAGACGGATTGCAGTACAGCGccaaaataatgttattcgCAAAGGTTACAATTGCAGAAGACGATGGATTACCCAGCTTAATATGCGGTGAGTGCATCTCCGAATTGTCAATCTCCTACGATTTCGTACAAAAATGTGAAGCTTCTGATCTAACGCTGAGGTGTCCAAGTGCTCCCGAGAACCCTGAATATGCCGCTGAAAGTGACTTTAAAATCAAAAAGGAGGAAATAAAGCTCGAATCGGACGAGGActtcttaaattttaacttcatGGATAGCGATGCTAGTTCCCCGTCGGAAGAGCAATCAGACGGGaagaagaaaagaaaatacaataaaaagaaACGGAAAGCGAAAATGGAACCAATACAATGTGTCATCTGTGGACATATGGCCTCCAGTCCGTCTGCCATGGACATACACATGCGGACGCACACCGGGGAAAAGCCATATCCATGTGAATCATGTGAATTGCACTTCTCAACCAAGGGAGCCCTGAAGCGACATTCTGAGACTTATCATTCCAATAGAGAAAGAAAGTACACTTGTGAGACTTGTGGAAGCAGTTTCTTTAGAAAgaatgaaattattacacatatCCGGGTACACACAGACGAGCGACCATACTCATGTCCATTTTGCACCATGAAATTTCGCCAAATTGGCTCCTTGATTCGTCACAAAAGAATTCACACTGGTGAAAAGCCTTTTGCTTGTTCAATCTGCAATAAAAAGTTTGCTGATAAAACCAttgcaaaaaaacatttattagttCATAGTGACGAGAAAAACTTCAGCTGTCATCTGTGTAACAAGTCAGTTAAGTCTAAGAATGCACTCAAGGTACATATGAACCTCCACatgaataataaacaaaacatttgcAGTTACTGTGGCTTAACATTTTCAATGAAAGGCAACCTCAAAACACATATCCGCAGAAAACATTCTGAGAAGTCCGGGGTATGCAATATTTGTGCAAAAACATTTTCAGACTTGGATGTCCACATGAGGAAACATACTGGAGAGAAACCGTTCAATTGTGAGATATGTCATCAGAAGTATGCTACCAAACGGAGTCTTACGCATCACATGGCTTTCAGGCATGAGAATGCTGCCAAATTCAAATGTTCCATTGGAGAGTGTACAAAAACGTTCCCTACAGCAATGATGCTAGAGTTTCATTTGCTGAAGCAGCATACAAACCACACTCCTTATGTGTGCCAACACTGCTCTCGTGGATTCTTCCGTACTAGTGACCTGTCGAGGCACCTACGAGTCAGCCACATGGACTTACAAaccGTTTCGTATCTGTGGCAGAGGGACGAAACGACCCTCGAAAACGCAGCGGTGCGTAATTCCGCGCTCGAATTTCAAACTCGCGCGTCGCTCGGTCGCTGTGGCCGCAGCGACAGTCGGAGGTGGCGCGGCGCGGCCGGCGAGGCCGTTACTCCGCgaccgccgccgcgctcgcaCGCGCGCTCTGACGGGATGTTAACGTGA
Protein Sequence: MDVKLCRICLSKSGEVSLFDKQDGLQYSAKIMLFAKVTIAEDDGLPSLICGECISELSISYDFVQKCEASDLTLRCPSAPENPEYAAESDFKIKKEEIKLESDEDFLNFNFMDSDASSPSEEQSDGKKKRKYNKKKRKAKMEPIQCVICGHMASSPSAMDIHMRTHTGEKPYPCESCELHFSTKGALKRHSETYHSNRERKYTCETCGSSFFRKNEIITHIRVHTDERPYSCPFCTMKFRQIGSLIRHKRIHTGEKPFACSICNKKFADKTIAKKHLLVHSDEKNFSCHLCNKSVKSKNALKVHMNLHMNNKQNICSYCGLTFSMKGNLKTHIRRKHSEKSGVCNICAKTFSDLDVHMRKHTGEKPFNCEICHQKYATKRSLTHHMAFRHENAAKFKCSIGECTKTFPTAMMLEFHLLKQHTNHTPYVCQHCSRGFFRTSDLSRHLRVSHMDLQTVSYLWQRDETTLENAAVRNSALEFQTRASLGRCGRSDSRRWRGAAGEAVTPRPPPRSHARSDGMLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -