Pcas009743.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- CSRNP3
- Assembly
- GCA_038024825.1
- Location
- CP149050.1:9907137-9909389[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.018 4.4e+02 1.0 3.6 56 114 22 79 1 110 0.61 2 5 0.17 4.1e+03 -2.1 0.7 74 94 176 196 162 214 0.45 3 5 7.2e-103 1.7e-98 329.3 8.4 1 218 221 430 221 430 0.94 4 5 0.49 1.2e+04 -3.7 0.5 75 87 513 525 493 549 0.37 5 5 0.082 1.9e+03 -1.1 0.2 40 117 640 720 633 723 0.56
Sequence Information
- Coding Sequence
- ATGGACGACATGTCTTCAACTTTAAGCCACCATGTGGTGGACAGTCAAGATGTATTAGATGGCAATATTGAAAGAGAGGCAGTTGTAGAAGCAATGGAAGAAAGGAATGGTGAACATGAATCTATATCTGTGATTAAAGATGAAAAAAGTAGTGACAGTGATGCTAACAGTGACGATCTTAGTTCTAACGATGAACAAAATAACGGCGATAGTAGTAGTAATTCTCAGTTTTATGAGAGTAGCGACAGTAAGGCAGATTTTGCTCTTAAAATTGATGACAATGATACTCTAAGTGACATAGATGACATAAAAACAGATACAGCTTCTGCTGATAGTGAAGATTCGGCGCTTGGTAGTTTACCCCCAGACAGTACTGGTAATGATAGAGATGAAGAAGCTCAAGACCGTTCTGATGGAAGTGATTCGGGAATAGGACCAGAAATTGCAGATcagaaattaatgaaattcaaTTTAGATCTACCATGTACAAGTGGTTTGAATAAAAGTGACTCACCTTGTCATTCTACAAGTCAAAAACGCGAAGAAAACGATGAAATCAACGAAAACGAAGAAGATTCATTAGCTCAAAGCACCAAATCAAAAAAGAGCAATCTCAAAAGACCGTTAAATGTCGATGACCAAGGAGAACCAGTGGCAAAAAAGAGAAAAGAAGGCATTAAATTTGACAGTGTTACTGTTTACTACTTTCCTAGAACACAAGGATTTACATGTGTTCCGTCACAGGGGGGTTCAACATTAGGTATGGAAAGGGAGCACACTCACACACAGAAATTCACTTTAGCAGAACATGCTTTAGAACAAAGAAGATTACATAGACAAATCATACAGCAATTAAAAAGTGAGCGAAACTCATTACAAGGATCAGTATCATCTTCAAGTGAAGATAGTGACACAGAAGAAGAAGCAAGCGACATCTCTGAATCAGAGTTAGATCTGGATAGTTACTATTTCCTGCAACCGGTTCCTACGCGACAAAGGCGGGCGCTATTAAGAGCAGCGGGTGTACGCAAAATTGAAGGATTTGAAAAAGATGAATGTAGAGATATTAGAACCTCTCGCGAGTTTTGTGGATGTGCCTGTAAAGGGGTTTGTAATCCTGACCATTGTTCCTGCAGTTTGGGAGGCATAAAATGCCAAGTCGATCGACTAAATTTTCCCTGTGGTTGCACTAGAGATGGGTGTGGCAACACTACAGGCCGAGTTGAATTTAATCCTATCAGAGTCCGAACTCATTTTATCCATACGCTTATGAGATTGGGTCTGGAAAAGAAAAACGAAGAAAATGAAGCAGCTAAAAAACTGTGGGCTGAAACACATAATGCTAATTCTACGTCGTGTAGTCCAAATACGTCTTACGACAGAGAACGCTGTCTCACTCATGAAGATGGACTTCTGCGTGACGTTAGTCTGACACCACGCGTAGAAGTCGAATCGTGCGTAAATGCTGGAAGTTTTAACAACGTACATTGTGATATGAACAATATTTCTAATCAGAATAATCACATGCACGAAGACAAGAGTTACACTTACACGAATAGTACGCTTAATCATAGTAACATGAATGACACAAATGTTGTAAATTTTGAAGAAAACATTCATAACAACCGTGCGGACTCGTATACTTGTAACGTTCTTCAAGGAAAGGGTCCGCCCTACTCCGCAGTCAACAACATGACATTTGACATGTCGAGTAATGTacaaaggtttcgaaacgatCTCAACTACTCTTACGGACAGCATACGGACCCCCACCATTTTAAAGCACCGCAAAGTTTTTCCGCAACCACTTTTGAAGAGTTCGCTCACAATTCTCATATATCGATGTTTAGTCATTACGGCCATATGTATGTCCCCGACTACATGCACAAACCGAGTCCGAGCATGCACGGACACGACTGCCATGAGTCACAATATCCCTTGCCACAAAACCATTACggtgtatataaaaataccacaGAATGTATGAATACCGAAAACAAGGCAGAATCACATTATAACATGATGCCATTGCCATATCAATCTAGTAATAAGTTGCCAAGTTCAGAGAATGATGAAAACTGGTTCAGTCATAATACTTTGCTGAACTTGGATCATTCGGACCAGACGACGCAGGACGCGTCAGATCTCCAACCCCCGCCCGCGGAGGCGCCAGTGGAAAACCAGACACCCGAGTCCACAGATAATTTCGGagaactaattaaaaaaactatggTAGAATCTGTTACTGTGTAG
- Protein Sequence
- MDDMSSTLSHHVVDSQDVLDGNIEREAVVEAMEERNGEHESISVIKDEKSSDSDANSDDLSSNDEQNNGDSSSNSQFYESSDSKADFALKIDDNDTLSDIDDIKTDTASADSEDSALGSLPPDSTGNDRDEEAQDRSDGSDSGIGPEIADQKLMKFNLDLPCTSGLNKSDSPCHSTSQKREENDEINENEEDSLAQSTKSKKSNLKRPLNVDDQGEPVAKKRKEGIKFDSVTVYYFPRTQGFTCVPSQGGSTLGMEREHTHTQKFTLAEHALEQRRLHRQIIQQLKSERNSLQGSVSSSSEDSDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGFEKDECRDIRTSREFCGCACKGVCNPDHCSCSLGGIKCQVDRLNFPCGCTRDGCGNTTGRVEFNPIRVRTHFIHTLMRLGLEKKNEENEAAKKLWAETHNANSTSCSPNTSYDRERCLTHEDGLLRDVSLTPRVEVESCVNAGSFNNVHCDMNNISNQNNHMHEDKSYTYTNSTLNHSNMNDTNVVNFEENIHNNRADSYTCNVLQGKGPPYSAVNNMTFDMSSNVQRFRNDLNYSYGQHTDPHHFKAPQSFSATTFEEFAHNSHISMFSHYGHMYVPDYMHKPSPSMHGHDCHESQYPLPQNHYGVYKNTTECMNTENKAESHYNMMPLPYQSSNKLPSSENDENWFSHNTLLNLDHSDQTTQDASDLQPPPAEAPVENQTPESTDNFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -