Pcas002133.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- SNAPC4
- Assembly
- GCA_038024825.1
- Location
- CP149045.1:4539116-4540690[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.029 28 5.3 0.1 22 46 434 459 430 459 0.86 2 2 1.3e-09 1.2e-06 28.9 0.2 1 45 465 511 465 512 0.95
Sequence Information
- Coding Sequence
- atgtccaATTCCAGTGACTCTTCGATTTCGGACAATGATCTCGAAGATGAATTAAGTGATATACGATTACTGTCGGCCGTCTTGAATTCTGAAGAGAGACGTGAACGCCGTGAGGTGAAGGTAACAACGGAGACTCCCTTAAAATCTGCCGAGAATTGCGATGCTTCTTCTAGTGCTTTGAATCCGGTTCCTTCGACTTCATCTTCTGTATTAGATAAGTCTAATTGTATGGCATCACCTATAACTGAGCCACCAGCGTCATCTAAGACTACCCCAAaagatgaaaaaaataaaaatgcatccTCTTCAAGTCCTACGGAGGTCATAAACATAATCCACAAGGTCTACACTAAATTTGGTACCAGAACTGAATCGACTGAGTCACTTTCCGAGTCTACTGTAAGAGTTATCACAGAGGCTATTGATGCAATTGAAAGAGATTTAAATGCGGCAGCAAGTCTTTTAGAACACTGCGGTATttcaaaactatttataacaaaGGGAAATGCACCACCagataccaaaaaaaaatcagctaaGAAATCTAAAAAACGAACTGATGGATTATACAGAATAAACGCTGCTTTAGAATTAAATTGCGAGCTGGAGATAAAGCTGATTAAGCTTCGCAATGAAGTAATAAAACGTTTTCATGAATGCAGACTTAAATTGCGGAGAGTAAGAGTGGAGTTAAAGTTACTCTATCATAGCTTGCAACAAGAAAAAGACAAAGAAGATCAAGATGCAGCACAGAGCGAAGCTGAAGCTCAAGATGAAACTCAAGATGAAGCTAAGGTTGAAACTCAAGATGAAGCTCAGGTTGAAACTCAAGCTGGAGCTGAAGCCGAAGCTATGGATGATAATCTTTTAGATGATgagcagtcagttaaaaataatacaagtgAACCCGACAATCTCCTAGAAGCTACTGATGATGATAGAAGTAGTGCTGAAGAAGAGCAAAAAGAACCCGTAACTCCAGATGACGAATCCACCACAGATGATCAATCGTCTTCATTGCATGGAAGTGAAGATACAGCTAAAGGAAATGAGCCTTCACATAACAGCCCTGAAGAAGAATGGACATACAAAGATAAATGTAAGCTTAAGAAAGTATTGAGGGACATGTCCCGTGATATAAAACGAAAGGAATTCAATAACAGAAAAGCACATCTATGCCGTCCGGGGATACCAATCACTAAAAgagttaaaaaagaaattaagatGATTGATAAACAGATTAAAAGCTTGAGGAAGAAAACACTCAATGAAATTGCGTTGCGTATCGATCAGGAATATGACTGGATTGAAGTTGCAAAGAAAATGAATTCAAACCGTACAGCAGGGGAATATCGCGACTTATGGAAATTGTACTTGCATCCGGATTTAAACAAGAGTAGCTGGAACTTGGACGAACATATTTCTTTGCAAGAAATTGCTAAGCGTTACAATTACAGAGATTGGAACAGAATTGCAACTGAGCTTAATACCGGAAGGACAGCTTATCAATGTTTTACATATTTCCGGAAGAATATCTATAAATGCTCTATTCAAAGGCTTGATAAacatgaataa
- Protein Sequence
- MSNSSDSSISDNDLEDELSDIRLLSAVLNSEERRERREVKVTTETPLKSAENCDASSSALNPVPSTSSSVLDKSNCMASPITEPPASSKTTPKDEKNKNASSSSPTEVINIIHKVYTKFGTRTESTESLSESTVRVITEAIDAIERDLNAAASLLEHCGISKLFITKGNAPPDTKKKSAKKSKKRTDGLYRINAALELNCELEIKLIKLRNEVIKRFHECRLKLRRVRVELKLLYHSLQQEKDKEDQDAAQSEAEAQDETQDEAKVETQDEAQVETQAGAEAEAMDDNLLDDEQSVKNNTSEPDNLLEATDDDRSSAEEEQKEPVTPDDESTTDDQSSSLHGSEDTAKGNEPSHNSPEEEWTYKDKCKLKKVLRDMSRDIKRKEFNNRKAHLCRPGIPITKRVKKEIKMIDKQIKSLRKKTLNEIALRIDQEYDWIEVAKKMNSNRTAGEYRDLWKLYLHPDLNKSSWNLDEHISLQEIAKRYNYRDWNRIATELNTGRTAYQCFTYFRKNIYKCSIQRLDKHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -