Pcas001574.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- MYB
- Assembly
- GCA_038024825.1
- Location
- CP149044.1:23815195-23817657[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3 2.8e+03 -1.1 0.0 22 33 239 250 237 260 0.83 2 5 5.1e-11 4.8e-08 33.4 0.1 1 45 270 316 270 317 0.94 3 5 2e-09 1.9e-06 28.3 0.3 2 44 324 370 323 372 0.94 4 5 1.2e-10 1.1e-07 32.2 0.0 1 43 376 418 376 420 0.97 5 5 1.5e-07 0.00014 22.3 0.0 3 45 428 472 426 473 0.95
Sequence Information
- Coding Sequence
- ATGGAACAAATGGATATAGATAGCGACACGGGCTTATACAGTGACGAGGAGAAACAATTAGAAGATTTACGACAACTGACGGCAGCTTTGGAAGATGACGAAGACGAGGCTTGCATTTCAACATACGCTGCTAGTGCAGCTATATCACAAAGGTCATTGTCAATGGCAAGTACATCAGTTTCCGATGGGATACAAGAGCAAGCGAAAATAGATTCCGCACTTGCACTCAATAAACTTCTCGATGAAAAGCTCAGGCGACTGGAAAAGGTGCTAATTGGTCGTCTACAAGAATGCAGACAACGACTAGGTGACCTGCAATCCTTAGCTGTTCCAGGCgaaaaaacagaaaaacatGAAACATTTCGGTATGTTAACTGTGGAAAACCTTATTTTAAAGACAAGTCAAACTTCCCTGCACCTGATAATGATGACACCATACTCATGGCTAAAACTAATATGTATGACTTTTCCGAAGTTATGTCAGTTCCTGGTTGGACGGTCAAAGACAAATGTAACTTGACAAAGTTACTACACAAGATGTCAATAGATATTAAAAAGAAGGAGTTAACATCAAAAATAGCCCAGTTACGCCGTGAAGCCAAAAAGGTGAAGCCAAAACAACTTTCAAAGGAAATCGATGCTATCAATAAAGAAATCACTGCTCTGAGTAAAAAGCCTCTTAAAGAATTAGCACTTCCAATAGATGAGGAGTATGATTGGGAAATAGTAGCCAACAAGTTGAATAGACGACATAGTGCCCAAGAGTACCGCTCACTGTGGAAACTATTCTTGCATCCCAGCATCAATAAGGAAGTGTGGAGTAAAAACGAACATGCCCGTTTATTAGAAATTGCTGATCAACACAATTTACAAGATTGGGACACAATAGCTAAAGAACTTAATACAGGTAGAACAGGATATCAATGCTTTGTATACTTTAGAACTAACATGAATAACACCCTGACAGGTAATAAGTGGACTAAAGAAGAAGAGGAATATCTCAAAAGACTTATAGAATATTACAAAGAAGAAGATTACATACCATGGGGTAAAGTAGCTGCTGCAATGGAGAACAGAACAAAGatacaaatatacaataaatattttagactTGTTGAAAAGCGAAAGGGTAGATTTCTTCCAGAAGAAGATGCTGTGATCCTTACATGCTATGATAAATTTGgtaagaattttaaaaaaatggctGAATATCTACCAGGTCGCTCCTCCAGCCAGTTAAGGGTTCGTTACTATGTTTTAGCGAAAGAGAGAATCTCTACTGTTTGGACAGTTAATGAGGATAGAGAACTGCTACAGCTTATGGCTAATCAAGATGTTTCAACAAACTATTCAAGTGTTACAAAACATTTCCCTGGAAAAACCCGTGCAAATGTTAGAACAAGATTCATCACTCTAATGAATTGGATGAAAAGAAACCCCAACCTTTCCTTGGAGAAAGCGCCAAGGCGGGGCGCGCGTCGTTTAGGCCATGGTCTCCCTACAGATAATCTTAATAAAGCTGTAGAGAGACTGAAGCACAGGATTGAATCTGAAGTTCATATCAGGAAGAGTAAGAGAATAACAAAAGAATCTCCACGTGAAGCCATTGAAGATGCCATTGTGGTGAACCTCCTAAATGAACAGATAAAAGAGCAGCAATCAAAACCAGATGAATGTGATGATGAGGAATTTGAATTAGATGACAATACATCAGTATCGATGAATACTATGAATGTGACAAATTTacagaaattaattattttattaaagggAAAATTAAAGCAGAATCTCTTTAAGAACAGTTCCTATGCTGAGCAGTACCCTGAACTTCTCAATACAAAGGGTGATGCGAATATTTTTAGAGTCAAGAGTTATtcgaaaaaatctttaaataatgtaatacaAATTAATGGATCGCCTGACATATGGGGAGGGATTACTTTAGGTGATTTGATGTACGTGTTGCCACCTAACTATGCTACAATAACGGGATGTAGAAAGTTAATGGCATATGTAAGCGCCAAATTGAGAAAAGATGCCAAAGAAACGCTCAACTTCAATCTTAATGCATTGATAAAAAAGAATCCTTTGCTGAAACAGCAATTATTTCTCTTGATGGAGAGATTTAATACATTGTTTTTATGGCCAATGCTTCTTTCCAATGAGGGTCCTGAACAAGTAGGAAAGAATATCACTGCACCTAAAAATTATTGCAAGAGAGTTGAACGAAAAACTACAAATACATGTAGTGTAACTTTTGACAAAAACGTAACACCTACATGCTCTGCTGGATTTTTGGTACCTCCGactttaaatatacaaaatatagatGATACTAGCAGCATTGATCTGCAGGAAGATCCaaaggaaaaagaaaaaacgaTCCTCAAAAGAATTATTGTAGATAATGAATTAGTAAGATTTATATCCGAAGAGGATGACaagaaaaaggtgaaaaaataa
- Protein Sequence
- MEQMDIDSDTGLYSDEEKQLEDLRQLTAALEDDEDEACISTYAASAAISQRSLSMASTSVSDGIQEQAKIDSALALNKLLDEKLRRLEKVLIGRLQECRQRLGDLQSLAVPGEKTEKHETFRYVNCGKPYFKDKSNFPAPDNDDTILMAKTNMYDFSEVMSVPGWTVKDKCNLTKLLHKMSIDIKKKELTSKIAQLRREAKKVKPKQLSKEIDAINKEITALSKKPLKELALPIDEEYDWEIVANKLNRRHSAQEYRSLWKLFLHPSINKEVWSKNEHARLLEIADQHNLQDWDTIAKELNTGRTGYQCFVYFRTNMNNTLTGNKWTKEEEEYLKRLIEYYKEEDYIPWGKVAAAMENRTKIQIYNKYFRLVEKRKGRFLPEEDAVILTCYDKFGKNFKKMAEYLPGRSSSQLRVRYYVLAKERISTVWTVNEDRELLQLMANQDVSTNYSSVTKHFPGKTRANVRTRFITLMNWMKRNPNLSLEKAPRRGARRLGHGLPTDNLNKAVERLKHRIESEVHIRKSKRITKESPREAIEDAIVVNLLNEQIKEQQSKPDECDDEEFELDDNTSVSMNTMNVTNLQKLIILLKGKLKQNLFKNSSYAEQYPELLNTKGDANIFRVKSYSKKSLNNVIQINGSPDIWGGITLGDLMYVLPPNYATITGCRKLMAYVSAKLRKDAKETLNFNLNALIKKNPLLKQQLFLLMERFNTLFLWPMLLSNEGPEQVGKNITAPKNYCKRVERKTTNTCSVTFDKNVTPTCSAGFLVPPTLNIQNIDDTSSIDLQEDPKEKEKTILKRIIVDNELVRFISEEDDKKKVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -