Pcas015140.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- kn
- Assembly
- GCA_038024825.1
- Location
- CP149056.1:10030221-10046355[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-53 8.9e-50 170.0 0.0 11 134 85 198 76 206 0.93
Sequence Information
- Coding Sequence
- ATGGGCGTGGCCAATGGGCGGGGCGGGGCGGTGCCTCCCAGCGGACTCCGTGAAAGCCTTCAAGAGCAGAACTTGAACGCGGCGGCGGGGTACGCGGGTTCCCCGTGGCCTCCGCTGGAGCTGGACCCGGTGGGATGGGGTCGGAAACTGTACCCGCCGGGGGCGCCGAGATCTTCAGGAGGTCTAATGTTCGGACTGCATCACCAAGAGGCAGCCGGGGGCCTGCACGCCCAGCCCCGGGGTCCAGTGACGTCACTCAAAGAGGAACCGTTAACACGTGCCTGGATGACGCCGAGCTCCCTAGTTGATAATACCAACAGCGTGGGGGTCGGCCGAGCGCACTTCGAGAAGCAGCCCCCCAGTAACCTGCGCAAGAGCAACTTCTTCCACTTCGTGGTGGCGCTGTACGACCGCGCCGGCCAGCCGGTCGAGATCGAGAGGACCGCCTTCATCGGATTCATTGAGAAAGATCAGgaAGCGGAAGGGCAGAAGACTAATAATGGAATCCAATATAGGCTACAATTACTTTACGCAAatgGTATTCGACAAGAACAAGATATTTTTGTTCGACTAATAGACTCAGTTACGAAACAGCTCAGTAACAAGAGGCCAATTACAAAAGATTTATCACCACCTCATAATGAACTTAGGCCGGGCACGGATATAAACTTAAAGGATGTGCTGTAA
- Protein Sequence
- MGVANGRGGAVPPSGLRESLQEQNLNAAAGYAGSPWPPLELDPVGWGRKLYPPGAPRSSGGLMFGLHHQEAAGGLHAQPRGPVTSLKEEPLTRAWMTPSSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQLSNKRPITKDLSPPHNELRPGTDINLKDVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01279054; iTF_01282009; iTF_00278900;
- 90% Identity
- iTF_00278900;
- 80% Identity
- -