Pcas003767.2
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- Arid2
- Assembly
- GCA_038024825.1
- Location
- CP149046.1:2798029-2826644[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-19 1.2e-15 58.1 0.0 2 89 17 101 16 101 0.93 2 2 9 2.4e+04 -3.9 0.0 38 63 1146 1171 1144 1182 0.73
Sequence Information
- Coding Sequence
- ATGTCTAAATcacaaataaatactaaatccAGCACCTATCTTAAGGATAAGGAAGCATTTCTTAAAGAATTAAAGCAGTTCAATGAAAGTAAAAATATACCATACAAGATACCATCAGTAAAtggtatagatatagatttgtACTTGTTCTACACTTTGGTACAACAACGAGGGGGTCTCATCAAGGTCAACTTCTATGATGTGTGGGACTCATTTTTGCGTCCGTTGAGGCTGCCACATCCATGTATAAATGGTTCAACATTGTTAAGAAAAATTTACGGCACATATTTGGAAAAGTATGAGAAGGCTAAAGGTCCACCGAGTAGGGACGATGACAATGATCTGGATGAGGACCCTCGGAGTCGAGGCCGGAGTGGTAACACTCCTAGGTTACCATATGGAGGTGGCACATACTATACAGCCTCCGGGGAGCCTCTCCGAACAAACCAAACCCGGGTAGCAGGTCCATCCGAGAGATTGGCACTTTCTCTTTTGTCTCCGATGCCAAATGAACAAGACTTTGCCGTAAATGTCTGCACGGTCCTCGCTGCAGACCATTCCAACCGAATGCCGCTAGGCACCACACCACATATATTGGACTTTCTACTGGCACATGCTGGGGTTTACAATCATACGAGTCTCCGCGATACAATAGGCCGTTCATACTTCGAGGCGCGAGGTCGTTACCCCCACGAGTTCTGGCAGCTGCGCGCCGGGGGCGGCGGCGCCAAGGAGCTGGCAGACGAGAACAAGTTCCTGCAACACGGCAGCGACCAGCCCGAGCTGATGGTGCAGGCGCTCGCGGCCCACAACACGCTCACCGACTGCCTCATGAACGAGTGTGGGGCGGAGGAACTCATTGAAAAGATTATGGAGGAGGAGGCACTAGAAGACTGGGTAACAGAGCCATCGGAGGACGAACAACTCTTCGCCCCGGAGCTACCCGGCGGCGCATCCTGCGTCTACACACAAAGGGTCCTGCAGATCGCGTCCATAGTCCGATCCCTGTCGTTCCACGAGGAAAACGTGCAGTATTTATCAAAGAACACCACGTTGATAAGGTTCCTTTTGCTGTGCGCTAATTGCTGGGTTGGGACCCTTAGGCAGTCCGGATTGGACGCGCTCGGGAATATATCTACGGAGCTCATTATAAAGGACCCGGCAACCTGTCTGATATCTCGCCATATTCTGTCTACCATACAATCGGCGTTAGTGTCGAACGACCGAGCGAGAGTGCTGGCTGCGCTAGAGCTGTTGAACAAATTGGCGCAGAATGAAGCAAACGAGGATGCGCTGTTAAAATCTTTGGAGGCTAAAGTGTACAGCGACGTGTGCGCGCTGCTGACGCTGCGCGACATCATGGTGCTGGTGTGCACGCTGGAGTGCGTGTACGCGCTCACGTCGCTCGGCGATCGCGCCGGCGAGTGTGTGGCCAGGGTGCCCGGCCTCGTCGCCACGCTCGTGTCGCTCGTCACCGTCGAGGCGCAAAGCTACGGGCCGCGCGCCTGCATCCTGATGCGCGTGGTGGAGACGGTGAGCGGCCCCAGCGCCGTCGCCATCGCCGCCGAGAGAGACGAGCGCACGCACCAACAGGTGCAAGTGCAGCCGGCGCCGAAGCCGGCCGCCgagcccgcgcccgcgccccccGCCGCGCCCGCGGCCGCCGTGCCCTTCTCCAACATACAGCAGTCGCATCTGCAGCAGAGGACCATACAGGAGAACGAGCACTTCGCGACGGCGTGGCTGCGGTCGTGGTACGAGCCGCTGCCGCTGGGCGACAACAGCGCGCTGGACGCGGGCGACGTGTACCGGCAGTACGCCGCCTGCTGCGCGCAGCTCGCGCGCAAGAACCTCGTGCCGCCGCCCAGCCTCGCGCGGCTCGTCAGAACTGTCTTCGGCGGTACAGTGGGCCCCAACACGGTCACACTGCCTTCTGGAGAAACACAACAAGTGTACATCGGGATCCGAGCGAAGAGTCAACCCAATCGATCCAACCCACCGGCCGGTCCAGCTTCGCCAATATTGAAGGCGCAACTGACGAACAAAACTGGGACAGTGGAAGTGAAAACTGCCGTATCACAGCCGCAGCCACAACAACAGCAGCCAACTCACCCGCACCTCTCCCACGCGCTAGAGTCACCGGCCACAAACACAACCCTCATAAAACACCTGCTCGCAAATAAAGTAAGCCCAGCCCTACAAACGCAACAAGTTGCGCAAAGGCAGCAAAATCAGCAGCGTGTCATCAGTACACCAGCCAGTACTGTCGTCGTGCAGCCTAATCAATCGgcTATGGAAGTGGACCCTGAAGCACTTATAAAATGTACCACAATAACACCGGGAGGTGTTGCCAGCAGCACGCCTAACGTTCAGGGTGacaagGTGTTGATTAAAACCGAGGAAACTGTTGcACCAAAAGAAGAGCCAATACAAATTCAGATTGACGAACAAACGCAATTGACAATCAAATcagcacaaaataaaatgctaGCGGATCTTTTGGAGAAGAAGTCCAACCCACCAGTTCAAGTAGTCCAAATGGCGCCGCAGATGAACGCACCGACCATTCAAATAACGGAAACGGGGCAGATAGTACAAGTGAAGTCAGATGCTAACCCAGTCATACAATTCAACGAGGGAGTGATCCAGAGCGGCCAATTCTTCCAAATAAAGAACGAGCAAGGTCAATTGATACAGATAAAAAATGACCAAGGCCAGATTATACAATTGAAGACGGACCAAATGCAAAATCCATTGATACAGTTTAAGAATGATCAAGGACAATTGGTGCAGGGCAATCAGATACTGCAGAGCGTTATACAAGGTGTGAAGTTGGAGAAGGAAGGTGAGAGTGCCGAGTACACGGAACCTGCGGCGAAGAGGGCCAAAGTTGAAGAGAAGAAAGAGaACCCTCCACAAGAAAGCGTATCTAAGACTGCGGCCAACCTGTATGCAGCACTCGCCGCGTCGGCGTTGGAAGACGAAGATGATCTTATGCCACCTAAACAGGAGACTGTCGAGACCCAACCACAGATTGTTGAAAACACGTCAGTTATTATTCAAGAACCCATCCTTCAGGTACAACAGCCAACCTTACAAGTGCAGCAACCGACAATGCAGGTCCAGCCATCCACACTGCAGATGCAGGCGTCAACTTTacagATCCCACAAACAACCTTGCAAGTTCAGCAACCAATATTGCAAGTACAACCGATGGATGTTCAGAATATCATCGCCTCACAGTCAGGACAACTGATTTTACAAGaaaaaacatTGACAACACAACCGCAATTTGTGCAACAACCAATGCAACTAATTGCAGCGCCTGGTACATCACAAGGTGGATTGAGTTATATAACTCAAAACATACCAGGAAATATGATGCAGAAGACCATAATCATAGTACAAGGGCCTACTGGCGGTGGACCTCTTACACTCACCGTTAACAACCCGGGCGGATTGGACGAGGCCACTCTAAACAGCCTTATTACTCAGGCCACAGAGGCGCTTACCCAACAGCAAATTATTCAGAACACAGGCGTGATACAATCGACCCAGAGGGTGATAGTGACGCAACCGACGTTAGTGAGCACGTCACAGCCAATCACGATGGTTAAAACGGCTCTCGCACAGAACGCTCCACAATTGACGCCGAGTCAACAGCCAATCATAACGACTCAACCGCAACCGCACAAGGCGCAGATCGTCAACCCACCCCAAACACAGCAGATAGTGGTCACACAGAAACAACCACCAGCGCTTATAAGCACCACCACTGGCAACCAGATAGTACAAGGGACCCCGCAGATCATACCGGCCAATCAGCAAATCATCGTATCTAACAACcaacaaataataatgaacACACCGATAAAGGAGATGATGTTACAACGTCTCACCGCCAGTGGCGCTGCTGGAGTGAGGATGATGCAGCAGTCTCCGCGGCCGCCGATACCTACCGTTGCCCAGACGCACGACACACAGCCTGATAAAGGCGTCATCAAGGGGACACCGAAGCCGGTGCAGCAGCAGATGCGCCAAGTGATCACCCGCCAGCCGGTGATGGTCGGCAACACCAAGATCGGAGACAGGGAAATGGTGGTCACACAACCGGTACCTGCACCCGAGCCGAAGCCGGCTGCCCCGGCGACGCCCGTGAAGCCGGCGagcacgccgccgccgccggccgccgcgcccgctGCGACCGCAGCGACCGCCGCCACCTCGAGCGCGCAGGACGACACCCCCTGGATATGCCACTGGAGGGGCTGTGGGAAAACGTTCGAGAGCGCGGCCGAGGTGTTCACGCACGCGGCGCACGTGCACTGCACCGGCGGCGCGAGCGGCGAGACGCCGTGCCTGTGGCTCGACTGCGACCGCGTGCCCAGGAAGACCTTCGCGCTTCTTAACCACCTCACAGATAAACACTGCTCGGCGCAATCACTAAAAGCGATATTCAACTCTCGCCGGCACGCTGCCGCGGAGTCTGAGGCGAGCAAACCCGTAGTATTGGGCTATCCCCCTAACGCGGCGTTGGCAGCTTTGAACAAACACGCCGCGGACATGTTCAACCCTAGAGAGCTTATGGACGAGAACGAGGGACCTGTCACGAAAAGCATCCGGCTGACTGCTGCCCTCATACTGAGAAATATCGTCATCTACTCAAACACAGGGAGACGacAATTGCGGTCGTACGAGGCGCACCTAGCTACTATCGCGTTGAGCAGCGTCGAAGCCTCCCGAACGATTGCGCAAGTTCTTTACGATATGAACAATATCTGA
- Protein Sequence
- MSKSQINTKSSTYLKDKEAFLKELKQFNESKNIPYKIPSVNGIDIDLYLFYTLVQQRGGLIKVNFYDVWDSFLRPLRLPHPCINGSTLLRKIYGTYLEKYEKAKGPPSRDDDNDLDEDPRSRGRSGNTPRLPYGGGTYYTASGEPLRTNQTRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRMPLGTTPHILDFLLAHAGVYNHTSLRDTIGRSYFEARGRYPHEFWQLRAGGGGAKELADENKFLQHGSDQPELMVQALAAHNTLTDCLMNECGAEELIEKIMEEEALEDWVTEPSEDEQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENVQYLSKNTTLIRFLLLCANCWVGTLRQSGLDALGNISTELIIKDPATCLISRHILSTIQSALVSNDRARVLAALELLNKLAQNEANEDALLKSLEAKVYSDVCALLTLRDIMVLVCTLECVYALTSLGDRAGECVARVPGLVATLVSLVTVEAQSYGPRACILMRVVETVSGPSAVAIAAERDERTHQQVQVQPAPKPAAEPAPAPPAAPAAAVPFSNIQQSHLQQRTIQENEHFATAWLRSWYEPLPLGDNSALDAGDVYRQYAACCAQLARKNLVPPPSLARLVRTVFGGTVGPNTVTLPSGETQQVYIGIRAKSQPNRSNPPAGPASPILKAQLTNKTGTVEVKTAVSQPQPQQQQPTHPHLSHALESPATNTTLIKHLLANKVSPALQTQQVAQRQQNQQRVISTPASTVVVQPNQSAMEVDPEALIKCTTITPGGVASSTPNVQGDKVLIKTEETVAPKEEPIQIQIDEQTQLTIKSAQNKMLADLLEKKSNPPVQVVQMAPQMNAPTIQITETGQIVQVKSDANPVIQFNEGVIQSGQFFQIKNEQGQLIQIKNDQGQIIQLKTDQMQNPLIQFKNDQGQLVQGNQILQSVIQGVKLEKEGESAEYTEPAAKRAKVEEKKENPPQESVSKTAANLYAALAASALEDEDDLMPPKQETVETQPQIVENTSVIIQEPILQVQQPTLQVQQPTMQVQPSTLQMQASTLQIPQTTLQVQQPILQVQPMDVQNIIASQSGQLILQEKTLTTQPQFVQQPMQLIAAPGTSQGGLSYITQNIPGNMMQKTIIIVQGPTGGGPLTLTVNNPGGLDEATLNSLITQATEALTQQQIIQNTGVIQSTQRVIVTQPTLVSTSQPITMVKTALAQNAPQLTPSQQPIITTQPQPHKAQIVNPPQTQQIVVTQKQPPALISTTTGNQIVQGTPQIIPANQQIIVSNNQQIIMNTPIKEMMLQRLTASGAAGVRMMQQSPRPPIPTVAQTHDTQPDKGVIKGTPKPVQQQMRQVITRQPVMVGNTKIGDREMVVTQPVPAPEPKPAAPATPVKPASTPPPPAAAPAATAATAATSSAQDDTPWICHWRGCGKTFESAAEVFTHAAHVHCTGGASGETPCLWLDCDRVPRKTFALLNHLTDKHCSAQSLKAIFNSRRHAAAESEASKPVVLGYPPNAALAALNKHAADMFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYEAHLATIALSSVEASRTIAQVLYDMNNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -