Pcas003415.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polylopha cassiicola
Gene Symbol
JMJ18
Assembly
GCA_038024825.1
Location
CP149045.1:21224832-21245191[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-20 1.5e-16 60.9 0.0 6 89 879 959 876 959 0.92

Sequence Information

Coding Sequence
ATGGGCACCATACGCTTTGTGCAGCGCAAGTTTGCACAGGGTGTACATGTACCGCATAATAACAACAATGTGACCCCGGCTGCCCCCGAGCGCAAGCCCGAGACCAAAGACGGACCAAGCAACGTTTACCACAATGGCATGTCTGCGCAGAGCCTCCTGGACATTGTCTCGCTGCAAAACACTCACCAGCACAAGCGTCCAATGATGTTGGTGATGCTGGAGCGGCTCAAGAACGTATCACCTAGCCCTCCCCCTCACGTCACAGTTCTAAAACGACGCAAGccgataaaaataaagaacaaCATGTGCCTCCGGTCTATGGGGAAAAGGACTAAGAAAATCGACGCCGCCAAGAAACTTCGCCTGAAAAAGGCCGGTGTGAAGAAATTGAAATTGCTAAGGAAAAGAAAGTGCGTAGAAATATCGAATGCGCCAAAGAGTAAGCGCTCCTGTCCCAGAGCTATAAGGTCCTCATCAGAATGTTCGCTAGATGACATGCCTCTGCTATATCTCGCCAACACACGAAAGGATAGTTCACAGGGATCTAGCAAGGATAAGGCTTCACCGGAGAAGTCACCGGAAACCAAAAATAAAGCATCTATTAAACCGTCATTGAAATCAGACAAGAAGACGTTGCACAAGTCCCCGATGAGGTCTCCACAGCGTTCGCCACAGATTTACCCACAGCGTTCGCCCCAGCGATTCCCGCAGCGATCACAACAGCGACTTCCGCAGCGTTCCCCGCAGAGCTCCCCACAGCGTTCTCCACAGAGGTTCCCGCAGCGTTCACCACAGAGTTCCCCACAGCGTTCTCCACAGAGGTTCCCACAGCGTTCACCACAGAGTTCCCCACAGCGTTCTCCACAGAGGTTCCCGCGTTCACCACAGAGTTCCCCACAGAGCTCCCCACAGCGTTCTCCACAAAGGTCCCTGCAGAATTCGCCACAAAGGAAGCCTCAGAAAGTATTGCAAAAGTCGATACAGAAGTCTTCACAAAATTCCCCACCGACTACACGTTTGAAGAAACGGTCCGTGGAAAATGGTGTTACGAAGGATGATGGCTTTTCATTCACTGTGCCGTCACAAGTCAGCCTGAGTAGGATTCGACGCATCAGCAAAAGCGTTACTGCCTCCGGAGGTGCTACGACTCGCGCCCGCTCGGTGCTGCCTGCGATCACACCAGTATCTGTCAGATTGTCGCCGCTTCACAAAAAAGCCCTCATGGCAgGTCTTAAAAAGTCCGGCTTACAGAAACCAAAGGTACAAGCGACTGACGCTAATGTACAGACTAAGATACCAGATATACCAGAGCCGTCTACTTCAGgTATTAAGAAGTCCAGCTCACAAAGATCAAATCTGTCTAGCTCAGAGAGTGATGTACCTCACTGTCTTGAGGTACAGGCTGAGATACACAGTGAGGTGCAGGGTAAACCACGAACTGAGGTCACGCAACCGCAGCCAACTACTTCAGaaGTCAACTCCGGCAGCAACGGCGACTATTACGGACCCAACGAGATCGACCAATGGATCGGTGTAGGCATCTCGTCCGCCGACGCCGTTACCTCGGTAACCCCGCCCGCCCAGAGCGAACCGCCCATCGTCGAACCGCCCACCGTCGAACCACAGTCCAGCCCGAAAACACCAATAATAGACATATGCTCAGACACGTCCGACAGTGTCGAGtttaaaaacgaaatactCCCGTCAAACGGCGGCCAAGTTGAGTCTATGTCTCCAACCCGGTGTCCGTCCAGCAGGTTCAACAGCGTGCACGAAGCGGTCCTCGCCACGTCCACCATGAACCGGGACCTGGAGAACAGATGCAGGAAATGCGAGGATTGCTCCATCATCAACAAAATAGACGAGTTGATGAAGCTGGTCAAGCCGTGCCAGAAGTCCGGCAGCTCCGGCGACGTGTACGACTTCAACGCGGAGACGGACGACGCGAGCCCCGTGACGTCGTTCAAGACGCACCGCGCCAAGCCGGACAACGCCGAAGAGACCCACCTCTACCTGGACGTGTTCCCGGCGCAGAACCCgcatataatcaaaattagcTCCGTCAAAATGCCACAGCAGAAGAACCCCATAACCAACGCTCGTTTAATGAATAAATCCGAGTTGCCGGCTGAAGAACTGGTGCAGATTGACAAAAAGAAACGCCTGGACATAAACGAGAGTAAAGCTCTCGCGACCCTCATGACTGCTTTGGGACAGCCGATTGACCTTGATAGTGTTAAGAGCGCGCCGGATAATGCTGAGTCCATCGTGATAGACGAGAATAGCTTGTGTAGTGAGAAAAGTGACGTGAACGAGCCCTCGACCAGTAGAGCGGCTCTCGAGGAACTGAGAGCTACAAGGAGCGCGAGTGTAGCCAGCAAGGAGTCTAGTATTGTCGACGACGCCGTTAAGATGCTGGAAGCGCCCAAGTTCCACCCTACCGAGGAGGAGTTTAAGGATCCCATAGCATACTTTGAGAAGATTGCACCGATAGCAATGAAGTACGGTCAATGCATCGTGGTGCCCCCGGAGTCCTTCAAGCCGCCGTGCCACCTCAACAGCAATATACGCTTCGCCGTCATCCACCAGTACCTGGGCAAGCTCTACAGCAGATGGGGGCCGGTTACCCGGGAAATGTCCGCCATAAAGGCTTATTTGAGGACCCAGAAAGTGGTGTTCTCCAGGGCGCCTTTGTTGGAGGGAGTGGAAGTAAACCTGCCCAAATTGTACCACGCCGTACAACGCAACGGCGGTCTGAAGAAAGTGATACAACGCAAGCGATGGAACAGAGTAGCCGATGAAATGGGATTGCATAAACTGCACCGTCCGGATAAAAAGCTGGACAAGATATACCTGCGGTGTCTGTTGCCGTACGATACACTGTCCAACCAGGAACGCCACGAGCTAATGCAGTCTGTCGAAAAGTGCTGGAATACCAAATACGGCAAGATGCTCGAGCGTGCGTCTAACCCGCTGCACCGACAGAAGAAACTCCTCGGCCAGTCGGACTCCTCCGAGGACGAGGAGGAGAGCGAAACGTACGGTGCGGTCGCGGAGGCGGAGGACTGCATCGTGCAAGGACGCACCATGAAGTTGGCCACGTACAAAAAGgtgGCCGGTGTTCTTATGGATATGAATTTTCCAAACATGAAACCGGGCACAGAGACAGTAGAGGAGGCGTATTGGAAAGCGGTAGTGGACGGCACAGATCATATTATCGGGAATACAGCTTCCATAGACACGGGTGAAGAGGGCTATGGCTTCCCCAAGGAAGATGGGGAGCCCTATGCTGACCACCCCTGGAATCTAAAGATGATTGCTAAGAACCCGGGCAACATGCTCAGCTACCTCGGCCCAGTGCTGGGAGTGACGGTACCCACCCTCCACCTGGGCATGGTGTTCAGCACCAGCTGCTGGCACCGCGACCCGCACGGTCTACCGTGGATTGACTTTATGCACAACGGCCCCGAGAAGATATGGTACGGAATCCCGGCCAACCAAGCGGCTAACTTCCGCAAGGCGGTCGAGGTGCTCTGCCCGGCGTACTGTCAGAACAAGTCGATATGGCTGGCGAGCGACATAGCGATGATACCGCCGAGCATACTCAGCTCGCACGGCGTCACCATGTCGAGGCTGGTGCAGCGACCGCGGGAGTTCGTCCTCGTGTGCTCGGAGgCGTTCTCTTGTTCCATAGCAACTGGATACACAGTGTCGGAGAGCGTGTACTGCGCGCCTATGACTTGGTTGAACAATGTGCAGAATTTGTTCCAAGAACTCCGCGAGAGCTGCGAGCCGACGATGTTCTCCCTGGAGCAGCTGGTGATGTCGATAAACCGCGAGCCGCGCGCGCCGGCGCACGTGCTCTACCCGGCCTGCGTGATGCTAGCCAAGATACTCGCCGACGAGCTGAGCCACCGCGAACAGCTGGCCGCCAAGAATATACCGATTCGTCCCTTCGTCCAGCCCAAGAGGACAACCCCTCGCGCCTGGAACTCCCGTGATCAGGAGGAGTGCGATTTCTGCCGGTCAACCCTACACATATCGAAGTTGACCGGCTTGACCCGCAAGAAATCGGCTGTCTGTCTCGAACACGCCATACGTCTGCTGAACTCGAGCAAGTACAAGGACTTTGACATAACCGTCTTGGAGATCACCTCACCGTTCACCACCCAGATGCTGAAGGACACGTTGGCTGGCGTGGAGAAGCGGATCGCCGAGGGCCAGCCTTAA
Protein Sequence
MGTIRFVQRKFAQGVHVPHNNNNVTPAAPERKPETKDGPSNVYHNGMSAQSLLDIVSLQNTHQHKRPMMLVMLERLKNVSPSPPPHVTVLKRRKPIKIKNNMCLRSMGKRTKKIDAAKKLRLKKAGVKKLKLLRKRKCVEISNAPKSKRSCPRAIRSSSECSLDDMPLLYLANTRKDSSQGSSKDKASPEKSPETKNKASIKPSLKSDKKTLHKSPMRSPQRSPQIYPQRSPQRFPQRSQQRLPQRSPQSSPQRSPQRFPQRSPQSSPQRSPQRFPQRSPQSSPQRSPQRFPRSPQSSPQSSPQRSPQRSLQNSPQRKPQKVLQKSIQKSSQNSPPTTRLKKRSVENGVTKDDGFSFTVPSQVSLSRIRRISKSVTASGGATTRARSVLPAITPVSVRLSPLHKKALMAGLKKSGLQKPKVQATDANVQTKIPDIPEPSTSGIKKSSSQRSNLSSSESDVPHCLEVQAEIHSEVQGKPRTEVTQPQPTTSEVNSGSNGDYYGPNEIDQWIGVGISSADAVTSVTPPAQSEPPIVEPPTVEPQSSPKTPIIDICSDTSDSVEFKNEILPSNGGQVESMSPTRCPSSRFNSVHEAVLATSTMNRDLENRCRKCEDCSIINKIDELMKLVKPCQKSGSSGDVYDFNAETDDASPVTSFKTHRAKPDNAEETHLYLDVFPAQNPHIIKISSVKMPQQKNPITNARLMNKSELPAEELVQIDKKKRLDINESKALATLMTALGQPIDLDSVKSAPDNAESIVIDENSLCSEKSDVNEPSTSRAALEELRATRSASVASKESSIVDDAVKMLEAPKFHPTEEEFKDPIAYFEKIAPIAMKYGQCIVVPPESFKPPCHLNSNIRFAVIHQYLGKLYSRWGPVTREMSAIKAYLRTQKVVFSRAPLLEGVEVNLPKLYHAVQRNGGLKKVIQRKRWNRVADEMGLHKLHRPDKKLDKIYLRCLLPYDTLSNQERHELMQSVEKCWNTKYGKMLERASNPLHRQKKLLGQSDSSEDEEESETYGAVAEAEDCIVQGRTMKLATYKKVAGVLMDMNFPNMKPGTETVEEAYWKAVVDGTDHIIGNTASIDTGEEGYGFPKEDGEPYADHPWNLKMIAKNPGNMLSYLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWIDFMHNGPEKIWYGIPANQAANFRKAVEVLCPAYCQNKSIWLASDIAMIPPSILSSHGVTMSRLVQRPREFVLVCSEAFSCSIATGYTVSESVYCAPMTWLNNVQNLFQELRESCEPTMFSLEQLVMSINREPRAPAHVLYPACVMLAKILADELSHREQLAAKNIPIRPFVQPKRTTPRAWNSRDQEECDFCRSTLHISKLTGLTRKKSAVCLEHAIRLLNSSKYKDFDITVLEITSPFTTQMLKDTLAGVEKRIAEGQP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-