Pcas002101.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- Atf6
- Assembly
- GCA_038024825.1
- Location
- CP149045.1:4097939-4103866[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-13 2.7e-10 40.5 10.6 3 56 317 370 315 372 0.96
Sequence Information
- Coding Sequence
- ATGGATGTTGACATATTACTAGAGAACAAAGACTTCTTGTatggtgaTGATTTTCTTGACCATTTAACAAAAGATTACCAATGGTCATCTCTATTGGATGCAACAGACGCTTCTCCAAGTGAAATTTTGGCTGATGCCACACCATTACTGGTACCTCCTATATCACCGGTTTTTAGTATCAAATCTTCTTCTAACGAAAGCAGCAACTCAGATTCTGGCAGCGATGATGACTCAAAGAAttctTCTAGTACAAATGCAAGGGATTCCTCTATATCACCCTTTGATTGGACTCCCAGTTTTGATGATGAGCCAACAAACAACTTAAAACTAGAGGACATTGAACAATTCTTGCAGAAATgtgGTCCAACCACAGCAAACCCACTAGTAACAGAACCCGTTCCAAATGTAAGACCTCCAGAGAGGAGTGGTCCTACAGTTGCAATAGAGAATGGAGTTATCAAAATAgagggAATAAAATTGGAACCTGAGGATTTTGAGAGTAAGAAAACAACAGGATGTGCCAATGGCACAATCACGTCTAAAGGAAAAGGATGCCATTTGAATACTTCAAATTATTTCAAAGTGGTGAATGAgaataatttatcaaataatgGCACAAAAGATCAAATTTTACTAAATCATCAAATCAAACTGGTTGTTGAACAAAAGAAGGTTCCCAGTTTACTACAGAGTAATAATATGCCTAGTATTGTTATACCAGGAGATGGTACGCAAGCTGGAAAAATTGCTATTTTACCCTTGCCACAATCTAAATACAACCATAGAAagGTATCGCCTCCCaggaacataataataaacccAGCTGTAACTAAATGCGAAAGCCCTAAACCAATAACAATGCAAAATCCTCTGAAACCTGAAGTTGACTCCGAAAACTTATTAGGCTCCATAGATGTTTCCAAACTGACTGACGATGAAGTCAGAGCTTTGAAAAAACAACAAAGGATGATCAAGAACCGTGAATCAGCGTGCCAGTCACGACAAAAGAAGAAAGAGTATGTGCTATCACTGCAGCATCAATTGATGGAGGCCCACAATGAAATAGCTAGGTTGAAGCGAGAAAATACTGACCTTAAGAGTCAGTTGGCACTATCCTGCGGCAGGCCTAGGAAGatacCACGCCTTGACGCAAGAGTACTAATACCTAAAAAGAATATAGCTGTCTTATGCGCCATGGTGTTTATGGTTTCATTAAATTGGAACATCCTTGGGTGGAACACCCAACCACACGTAGGACCGGCCCAACCTCATACAAGTATGAGACACTTACTGTGGTCTGAGGACAGTAAGGAGGTACCAGATAACTCATTCGAAGAGATAGCTAACAAAAGTACTTACTCGAGTGATTGTCGGAACGCTACTATAAAACCAGGCGACTATGTAAATATCACCCAAACTGAGAGCATTCGGATCGCCGGTGAGTTGAATCGGTGGATAGGTCGTGGAAAGACCTTGAATTGGACCCATCACGAACCTAGGAGAAGGCCTAAGTACTTTGCAGAAGAGAAAATCGATGATGGATTAATTGGAGCATATAGACTTTTTAACAAATTGAATATCGACGCTAATTTCGTCGAATTCGCCAACGCAAACGGACCCCGAAAGGTCACAAGAGACAAGCCGCGTGTCCGCAGAGTCGGCAGGAGCAAAGATATCGACTATTCAGAGACAGCTGTTATAGACTACGAGACGTTGTATCCCAAGCCGATGAGGAAACCCGTCGAAGACTTCGACTTTGGTGATTTTGGGGAGTGGAACgcgcttttacaagctcttcaGAGGCGTGACGACACATTCTACGTTGTTGGCGTCGGTAAAGGTGAACATTTGTTACTCCCGGCGGTATCGCATAACGTCACCAGGCCGCCGAAGATGGCCTTGATTCTGCCGGCCAGGACTGGCAATGaTTCGTCAATGAATGATCATGTGACACTCATGCAAATTGATTGCTCCGTAGTCAATACTTCGCTGGTGAAGCTAAAATCTGATGCTCTTCCTGTGAGCTTGAGATCGAAAACAAATGACCCAGCCAAAGCAGCCGTGTTCCCAACTAAACCAGACAGGAAAATCTTTAATAGAGATTCAGATAAAAATTCTATAGAAAATGTTGACATGCATAGCCCCAGTAGCAATATATCAAATTATCCAACTAGATTTAAGAAAAAACATCCAAGAAACAACAATGAGTTGGGCAAGGATGACCACTTTacgcaatatttattttccaagTACGAAGAAGCTAAAAGTGATATGAAACATAACAATGTTGCTAAACGAGCGAAAATTGACAAAAGAGGTTCCGTATGA
- Protein Sequence
- MDVDILLENKDFLYGDDFLDHLTKDYQWSSLLDATDASPSEILADATPLLVPPISPVFSIKSSSNESSNSDSGSDDDSKNSSSTNARDSSISPFDWTPSFDDEPTNNLKLEDIEQFLQKCGPTTANPLVTEPVPNVRPPERSGPTVAIENGVIKIEGIKLEPEDFESKKTTGCANGTITSKGKGCHLNTSNYFKVVNENNLSNNGTKDQILLNHQIKLVVEQKKVPSLLQSNNMPSIVIPGDGTQAGKIAILPLPQSKYNHRKVSPPRNIIINPAVTKCESPKPITMQNPLKPEVDSENLLGSIDVSKLTDDEVRALKKQQRMIKNRESACQSRQKKKEYVLSLQHQLMEAHNEIARLKRENTDLKSQLALSCGRPRKIPRLDARVLIPKKNIAVLCAMVFMVSLNWNILGWNTQPHVGPAQPHTSMRHLLWSEDSKEVPDNSFEEIANKSTYSSDCRNATIKPGDYVNITQTESIRIAGELNRWIGRGKTLNWTHHEPRRRPKYFAEEKIDDGLIGAYRLFNKLNIDANFVEFANANGPRKVTRDKPRVRRVGRSKDIDYSETAVIDYETLYPKPMRKPVEDFDFGDFGEWNALLQALQRRDDTFYVVGVGKGEHLLLPAVSHNVTRPPKMALILPARTGNDSSMNDHVTLMQIDCSVVNTSLVKLKSDALPVSLRSKTNDPAKAAVFPTKPDRKIFNRDSDKNSIENVDMHSPSSNISNYPTRFKKKHPRNNNELGKDDHFTQYLFSKYEEAKSDMKHNNVAKRAKIDKRGSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -