Pcas004917.1
Basic Information
- Insect
- Polylopha cassiicola
- Gene Symbol
- cnc
- Assembly
- GCA_038024825.1
- Location
- CP149046.1:19031107-19042841[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.038 41 4.7 0.0 14 36 256 278 255 294 0.80 2 2 2.4e-12 2.6e-09 37.3 12.0 3 60 304 361 302 375 0.89
Sequence Information
- Coding Sequence
- ATGAATCTGTCAGTGTCGCACTACCCTTACGGGACACATCCGTTCTACCCGCCATACTTGATGTACTCCGACCCGGTCGAGTATTTCAGTACCTACTACAAGCTATACGACGgCATGTACACAATGAGAATGCTTGACGGCGCCTCGGCGCATCATGCGCCGGCGCACAACCACTCGCACATGATGATTGCAGAGCGCGACTCCGCGTCGGACAGCGCGGTGTCGTCGATGGGGTCGGAGCGCGTGCCCTCGCTCTCCGACGGCGAGTGGTGCGACGGCAGCGACTCCGCCCAGGAGTTCCACAGTTCTAAATTCCGCCCTTACGACGCGTCATACGGGCGGGAGCGCTCGCACCCGCCGCAGAAGAAACACCACATGTTCGGCAAACGATGCTTCcagGAGCAGACCCCGGCGCCGGCGCTGGAGCACCCCCGCCCGCCCGCCGTCAAGTACGAGTGCCCCGAGCAGGCCTACCACGACAACATGCACATGCACAATGTGGAATTCGGCGCGCGGCAGCTGAGCGGGCCGCACGCCGCGGTCCAGCCGCCGCTCGATCTGAACGCGCCGCACTCCAGCCACGCTCTACTACagTCGGGTATCCCCAgcccggcggcggcgcgctaTGCGTACGCGCCGCCGGAGCGCGTGCGGCACAACCACACGTACAGCGCCGCGCTGCCCGCCGCCGACCGCCCCGCCGCCGTGCGGGACAAGCGAGTGCGCCGGCTGACGGACGGCAGCGTGTCGGACGGCGGCTCGAGCGCCGCGGCGCAGCTGTCCAGAGACGAGAAGCGCGCCAAGGCACTCGGTATACCCATGGAGGTGTCCGACATCATCAACCTGCCGATGGACGAGTTCAACGAGAGGCTCTCCAAGCACGACCTCAGCGAGGCGCAGCTGTCTCTCATCAGGGACATACGACGCCGCGGGAAGAACAAGGTGGCAGCGCAGAACTGTCGCAAGCGCAAGCTGGATCAGATCACGTCGCTGGCGGACGAGGTGCGGTCGATGCGGGACCGCAAGCAGCGCACGCAGCGCGACCACCTCGCGCTCACCGCCGAGCGGCAACGGCTCAAGGAGCGCTCCGCCGCGCTCTACAGACACGTCTTccagAACCTGCGCGACGCGGAGGGCCGGCCGCTGTCGATGAGCCAGTACTCGCTGCAGCAGGCCGCCGACGGCAGCGTCGTGCTCGTGCCCAAGATGGCGCCCGATCACCCAATGAACCGCACGTCGGATGACGAAATGGACCGCAAGGCGAAGCACTACGACCAGTGA
- Protein Sequence
- MNLSVSHYPYGTHPFYPPYLMYSDPVEYFSTYYKLYDGMYTMRMLDGASAHHAPAHNHSHMMIAERDSASDSAVSSMGSERVPSLSDGEWCDGSDSAQEFHSSKFRPYDASYGRERSHPPQKKHHMFGKRCFQEQTPAPALEHPRPPAVKYECPEQAYHDNMHMHNVEFGARQLSGPHAAVQPPLDLNAPHSSHALLQSGIPSPAAARYAYAPPERVRHNHTYSAALPAADRPAAVRDKRVRRLTDGSVSDGGSSAAAQLSRDEKRAKALGIPMEVSDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRSMRDRKQRTQRDHLALTAERQRLKERSAALYRHVFQNLRDAEGRPLSMSQYSLQQAADGSVVLVPKMAPDHPMNRTSDDEMDRKAKHYDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462116;
- 90% Identity
- -
- 80% Identity
- -