Pmex018781.1
Basic Information
- Insect
- Polyergus mexicanus
- Gene Symbol
- pnr
- Assembly
- GCA_030449975.1
- Location
- JAUDSZ010000010.1:4339091-4344862[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 1e+04 -2.4 0.1 3 12 232 246 231 248 0.58 2 2 7.6e-17 5e-13 49.7 5.1 1 35 423 456 423 457 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCGCAGAAGTTCTATGAGCTGTGTCGCCTTTGTTTATCCCCGGACGGTGTCAAATGTTCCATATTCGAGGAGGAGGGCATTCAGCGAAGTTTCGCCGAAAAGATATTAGCGTGCTTGTCAATCACGgTAAAAGATGGCGATACCTTACCGTCAATTATCTGCCATCggtgtgtatataaattggATGTACTGCACAACTTTCGAGAAGTGTCGCAAAAGTCTGACATTATACTTAAACAGTACCTGGATTATGCCAAGCAATTGTCATCTTCTGATGAGCAGAAAGAGACTCTCTCCACTGCCAAAATAATAGGCGAAAGCCCTCTACAATCGTTCCTCGAGTTAAATAGGACATTATTCAATGAGGAGTCTAATTCTGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTTTAACGCATCATCTACAGTTGCAAAACAGTGATATGCCAGAACATGAAAATATTAAGTGCGAACCAGAGGATGACACATGTTCTAACAGCTCTGATCCTGAACGACTAGAAATTGAGGATCGTGATGAGCAGGAAATTGAAAGCGAAGAAAATGGTTATGACATGACTGTTAATAAGAGAATTAAAATTGAGGACAATTATGATGGCTCCGAACCCAACACAGCAAATTGTAGTCCAGTTAATAGAATGGATACCCCAGAGAGCAATTGTTCCGATAGTAACATTGACCATGAAACGACGAAGCTGTGGCAAGCTTTAGCTAGTAATAGAAGTTTGGAAATCACACGAACAAATGGTGATAAGTTAAATAATGGATTTACCGGCGAAGCCACAAATCTGCTACGTTCTTTGATTAACAATAGGCAGATTGGTATTACCGCTATTGATTCAGATAAAATATCTCCGCAAATCAAATTCTATAGGGATACGCAGGGTACAACTATTGAACATACGCTAACCGATTTCCCTGTGCTTGGTAATCGTACGAATATAGCAACTTTAGAAAATAagAGTGCCTCAATAGATAGTAACCCATCTAGCCCTGCCAGTATCGGTCGTAAGGAAATGACGATAGCGACGAAAGGTCGGAGAAAGCAAAGTTATCCCAGTAAGGCTCCAGCGAGTCCGGATATTGTCGCCAATTACCAACATGAACCCAACAATGAAGAGCAGGCTCATGATTTTACTACATGGTCGAACAAGATAAAAGGAAAGatGGATGATCAAAAACAATTCGATCAGCAAAGTGGCAACATTGCAAAGAAGGTCGACATGTCTTGCACAAATTGTGGCACTATGACAACAACCATCTGGAGAAGGAACATGAAGGGCGAGATGGTGTGCAATGCTTGCGGACTGTATTACAAACTTCATGGTGTTAATCGCCCAGTTACTATGCGAAGAGATACTATACATACGCGCAGACGTAGACCCAAAGGCGAGAAACCAACGAGACATAGAACTAACAATAAGTCATATTTAACGTAA
- Protein Sequence
- MFDVPQKFYELCRLCLSPDGVKCSIFEEEGIQRSFAEKILACLSITVKDGDTLPSIICHRCVYKLDVLHNFREVSQKSDIILKQYLDYAKQLSSSDEQKETLSTAKIIGESPLQSFLELNRTLFNEESNSEPASINQNIIPQTLTHHLQLQNSDMPEHENIKCEPEDDTCSNSSDPERLEIEDRDEQEIESEENGYDMTVNKRIKIEDNYDGSEPNTANCSPVNRMDTPESNCSDSNIDHETTKLWQALASNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAIDSDKISPQIKFYRDTQGTTIEHTLTDFPVLGNRTNIATLENKSASIDSNPSSPASIGRKEMTIATKGRRKQSYPSKAPASPDIVANYQHEPNNEEQAHDFTTWSNKIKGKMDDQKQFDQQSGNIAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRTNNKSYLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00869291;
- 80% Identity
- -