Basic Information

Insect: Polyergus mexicanus
Gene Symbol: zld
Assembly: GCA_030449975.1
Location: JAUDSZ010000013.1:5933783-5936917[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00045 0.079 14.7 0.7 1 23 26 48 26 48 0.98

2 7 0.00016 0.028 16.1 0.0 2 23 224 246 223 246 0.97

3 7 0.0026 0.46 12.3 2.9 1 23 458 482 458 482 0.92

4 7 3 5.2e+02 2.7 5.1 1 23 885 908 885 908 0.95

5 7 0.00014 0.024 16.4 0.3 1 23 914 936 914 936 0.98

6 7 0.0002 0.035 15.9 5.1 1 23 942 964 942 964 0.97

7 7 1.8e-06 0.00031 22.3 3.2 1 23 970 992 970 992 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00045	0.079	14.7	0.7	1	23	26	48	26	48	0.98
2	7	0.00016	0.028	16.1	0.0	2	23	224	246	223	246	0.97
3	7	0.0026	0.46	12.3	2.9	1	23	458	482	458	482	0.92
4	7	3	5.2e+02	2.7	5.1	1	23	885	908	885	908	0.95
5	7	0.00014	0.024	16.4	0.3	1	23	914	936	914	936	0.98
6	7	0.0002	0.035	15.9	5.1	1	23	942	964	942	964	0.97
7	7	1.8e-06	0.00031	22.3	3.2	1	23	970	992	970	992	0.98

Sequence Information

Coding Sequence: ATGAGTGAAATGACGAGTGTTGTCGAGGCACAGCAACAACAGCAACAATACGTAGGTGACAGTTCGAATGCGAGGCATCGTTGTAAGGACTGTGGTGTCAATTTTGACGGCGAGAAGAGCCTGGAAGTGCACGTGCGGTATCATAAAGAGAACTTGTTAAATCGGTGGGCTAATAAGGCACAGCAGGAAGAGAGCAATAATAATCATAGTAAGACTGGCAATCATAATAGTCACGTGAATGTCAATCGGGATAGTGTGACTGTGCCGACGGACTCGAGTGAGCCGTCATCGATGTCGCCTTCTCAAGATCCAACATCCtcgcagcagcagcagcaacagcagcagcagcaacaacagcagcagcagcagcagcagccaCAACAACAACctcagcagcagcagcagcagcagcaacagcctGCCATACATACACTTGTATGCCAGCCATACGATCATTTTCAAACATCAATGTTTAGCGAGAGCGGCTATTATATGTCAAACGAGCAGTCTTATATGTTAACTCATCATTTTTCGCCGTCACAGGAAGACACTCAAAGCAATCGCGACGGTGGCGGCGGTTACCCGCGTTATCATCCGTATCAGCATCAGCAGCACTATTCTGCGGATCGCGCGACGTCCAATTCTACTAGCCCGCAAAGTCCGCCGCTTCAATGCGACAAATGCGGTGCCGTTTACGAGGACGCAAATCAGTTAGGCGAGCACATGAGAACGAATCATTTGGATTCGCCTTCTGCGTATCCATCCGCGCCGCAATATCAACAACTGGGCAACAGTCCTCAGCAGTTGCATCCATCGCCGCCTCTTTCCAATCAACCGCAACAACAACCTAGTTACGATTATAACGGCGGACAAACGAGTAAGTTGGACATGAAACAGGAACCGCCTGAAGAGCAGGCTGAAATCCTCGACTTGGATTCTCACAAAGTACAAACGCACCGATACGAGGAAGAGCTCGTAAGAATTCATCAACatcagcagcagcaacaacaggGACTTCAGATGCAGATGCAGCAACGGCTGATAccgcagcagcagcagcagcacaGAATAGGATCACATTCGGTGAGTTCTATGCTGGGTTGGCCGCCGGCCACCCAACCACATGATTATCATACTGGGCTTGGCTCTATGGGCCCCATAGACAATGTTGCTCCACCGATTGCTGATCAGGGTCAGTTCATGCGCGGTCAACATATGCCCATGGAGCACGGACATCAAGGCTCACCAATAATTACAAGCACGCAACCGATGGCAAGCCACCAGATGCCGGCTGGTTTCGTCCAACAACCGCCGAAAGCGCCGTTAGCAAATCAATCCTGGAAAAGCAACGAGCCGCGCCGGCCAAAGACCTACAACTGCACCGCGTGCAACAAGTGGTTTACAAGCTCAGGCCATCTCAAAAGACACTATAATacgacgttgcacaagaacgcTGTGAAGAATGGCAAGGAACCTGATCCGGCGAACTTACCGATTAGCGCTCATCATCATCCTGCTAGAGACAATAATCATTCGGGCAGCAGGGGCGGCGGCGCGCCCGCACGATCCCCGCCGGATTTATCATCTTCCAGGAGTCCCCCAAACTTGATGGCAGGTCCCTCGGGCGAGGCGACGAGGGGCCTGCTTCACACGCCCACCACCCACTGCAATtccagcagcagcaacagcagcagcgaCTCTTCGGCAGCAGCCCTGCAGCAACAGCTGGTCCATCTGCCGCACTCGGGAATGATGCCGGTCAATTCTCCGGTTCCATCGTCGCTGGCGGGACATCATCAGCAACAAATGGGTTCTGCGCCTCATCAGCTGGGCCtccagcagcagcaacaacaacagcagcagcagcttCACCTGCCAACGGATTCGCCGGGCCAGCCGGTGCATCATACCACGAATTCGCCCATACCCCCGCAGGCAGCATCGCACATGAATTGCCCTTCACCAATGGGTACATCCCCCCACCCGCATCACATGAACTCGCCACCAGGCTTGGCCCATCCGGCGATGACTTCGCCCACGGCGATGGGGGGTACTACGATGCCTCATCAGCCGTACCCAAACGCCTTGCCCCCCCACGTTACAATTACTACCAACACCCCGGCGGTCCTACTGGAGTCTACCCAACCAGTTACCACCATGCAACTAACTACTATTGGTAACGAGCAAAACGACCAACAACATCAGCTGCTGCCTAGTTTTACGATCTTCGATCAGAAGAATTTCACGCAAATCGGTGTGCTAACTGGGTTTGTAGTAGAACAAAACCAGATACAAACCGTTAACGTGGGGGGGCTAAGCGCGGAGGAGATTGCTCCTCAAGAATCTTTTGAATCTTCCACAACGACCTATGATCCGTATTCACCATCGCGCTATAAGTCGTTGACCGATATGGATGTAACGACGATACAGACGAACGAGGAACAAGTATCTTCGCTCTCCTATCAGCTTGAGCAACAACGCATTGATCTCGAAACGAATAATAATCATCTATCACAGCCGAGGCAGGCGAAGGAGGATTTAGACCCGAACATTGGCTTGCAACCTAAGAAGGAGCGTAAGAGCAAGACCAACTCGAGCAAGCAACGTCAGGTCACTACCACTGTAGCCAATTTTATTTCGCAGGATGGCGTTTACAAATGTATTGATTGTAACAAGTATTTCATGAGAGGTTGTTATCTCACGCAGCATAACAAAAGTTTCCATTCGGGCGACAAGCCGTTCAAATGCGCCCAATGCGGCAAGCGATTTCCGAACGAAGAAGTGTACGAAAAACATGTTCAGATGCATACCTGTGCGAGGAGACATCAATGCGACGCTTGCCCGAAGGTGTTCGCCCACAAGACCGATCTCAAACGACATACATGCATCCATACCGGTAGGAGGCCATTTAAATGTGATACTTGCGGTAAGGGATTTATTCGACAGGATCATATGAAGAAGCATCAGGACACGCACAACAAGAAAGCGCGGCTGACCGCGCAACGGCAGAACGTCCAACGGTTAAACGCTCAGCGGCTCAACGGTTCGCGTTTCAACACTCAACGATTCAACGCTCAACGGTGCAACGTTGAACGGCCCAACGATGTCCATAACAACTACGACAGAAAGTTATAA
Protein Sequence: MSEMTSVVEAQQQQQQYVGDSSNARHRCKDCGVNFDGEKSLEVHVRYHKENLLNRWANKAQQEESNNNHSKTGNHNSHVNVNRDSVTVPTDSSEPSSMSPSQDPTSSQQQQQQQQQQQQQQQQQQPQQQPQQQQQQQQQPAIHTLVCQPYDHFQTSMFSESGYYMSNEQSYMLTHHFSPSQEDTQSNRDGGGGYPRYHPYQHQQHYSADRATSNSTSPQSPPLQCDKCGAVYEDANQLGEHMRTNHLDSPSAYPSAPQYQQLGNSPQQLHPSPPLSNQPQQQPSYDYNGGQTSKLDMKQEPPEEQAEILDLDSHKVQTHRYEEELVRIHQHQQQQQQGLQMQMQQRLIPQQQQQHRIGSHSVSSMLGWPPATQPHDYHTGLGSMGPIDNVAPPIADQGQFMRGQHMPMEHGHQGSPIITSTQPMASHQMPAGFVQQPPKAPLANQSWKSNEPRRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKNGKEPDPANLPISAHHHPARDNNHSGSRGGGAPARSPPDLSSSRSPPNLMAGPSGEATRGLLHTPTTHCNSSSSNSSSDSSAAALQQQLVHLPHSGMMPVNSPVPSSLAGHHQQQMGSAPHQLGLQQQQQQQQQQLHLPTDSPGQPVHHTTNSPIPPQAASHMNCPSPMGTSPHPHHMNSPPGLAHPAMTSPTAMGGTTMPHQPYPNALPPHVTITTNTPAVLLESTQPVTTMQLTTIGNEQNDQQHQLLPSFTIFDQKNFTQIGVLTGFVVEQNQIQTVNVGGLSAEEIAPQESFESSTTTYDPYSPSRYKSLTDMDVTTIQTNEEQVSSLSYQLEQQRIDLETNNNHLSQPRQAKEDLDPNIGLQPKKERKSKTNSSKQRQVTTTVANFISQDGVYKCIDCNKYFMRGCYLTQHNKSFHSGDKPFKCAQCGKRFPNEEVYEKHVQMHTCARRHQCDACPKVFAHKTDLKRHTCIHTGRRPFKCDTCGKGFIRQDHMKKHQDTHNKKARLTAQRQNVQRLNAQRLNGSRFNTQRFNAQRCNVERPNDVHNNYDRKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00265257;
90% Identity: iTF_00730306;
80% Identity: -