Pmex008654.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polyergus mexicanus
Gene Symbol
ct
Assembly
GCA_030449975.1
Location
JAUDSZ010000005.1:1981536-1985610[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-32 1.3e-28 100.1 0.0 2 77 320 396 319 398 0.96
2 2 9.7e-31 9e-27 94.2 0.0 3 75 554 627 552 631 0.95

Sequence Information

Coding Sequence
ATGCCAGCATTCGCACGTGGACCACAGGATGGTGGTCCGCCGGAAATGAGTGACGAAAGATTGGCGCATATTCTCTCGGAGTCGAGCCATATGCAAATGAGGGGCGAGCATGAGGTATCGAACGACGCTGATAGCAAGAGCCCGAGTAGGATCGGTTGTCCGAGTCCGTTTAACAAAGACAGACTGGACAGCCAAAACAGGAGACTGAAGAAGTACGAGAACGATGACATTCCCCAGGAGAAGGTAGTGAGAATTTACCAAGAGGAGCTGGCTAAACTGATGGGCAGGAGAGTAGAGGATCTTCGTCCGCGAGAGTTTTCTAGTGCGATTTTTCCACATTTTTTCAGTGGCACTCAAGGCGGTCTTCAAGGTATTGAGCGCACTCAGGAAGATATTCGATTGGCATTGGATGCTTATCATCGTGAGCTTCAAAAATTGAACTCTGCACCAGGTCAGAATCCGTCGATGGCTGGATTGCCAGGATTACCTGGGCTTCCGGGATTGTTGGCGCTTCAGCAGCAAGCTCTTCAGCAACATCATTTAGCCGCTaatggcggcggcggcggtggcgctGTTCAAGATTTAAGTTTAGGCAAAATAGATCCGCGCAATAAAATGATAAACGGCGTCTcggaggaagaaaaagaaaagatggaAGAGGCGATGAGACATGCCGGTAGCGCTTTTTCCTTGGTGAGGCCGAAGCAGGAATCGACGGGCCCTCAATCAACACCCGGCGGTTCCAGCGCGAGTTCACCTCTAGGCAATTCTATACTTCCCCCTGCGATGACACCTAACGAAGAGTTCGCCAGTGCGGCGGCGGCCAGTCCCTTGCAAAGGATGGCTTCCATCACAAATAGTCTGATAAGTCAACCGTCCACACCAACCCATCATTCGGCTAACCAAAGGCCTTTGAAAGCTGTGCTTCCTCCGATTACTCAGCAGCAGTTCGACATGTACAATAATCTAAACACTGAAGATATCGTGAAAAGGGTGAAAGAACAGCTGTCTCAATATTCGATTTCGCAGCGGCTATTCGGCGAGTCGGTATTGGGTCTGTCTCAGGGATCAGTGTCGGACCTCCTCGCGCGTCCCAAACCATGGCACATGCTGACTCAAAAAGGTCGCGAGCCCTTTATTCGAATGAAGATGTTTCTTGAGGACGACAACGCAGTACACAAGTTGGTCGCAAGCCAGTACAAAATTGCTCCAGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGcATGTGGAACACCCATGAAACCTATGCCGCCGACGAAACTTGTGCAAGAACAGCTACAAAACGCAGCGAAGGCGCAGGCCGCTGCTCAAGCAGCTGCGCAAGCAGCGGCGGCGCAGCATCAGCAGGAGAATCAGATGCAACTCGGCCCGCCTCAGCAAAGTCCTCAGCTTCCGCCACATCCGCAACCGCCGCCGCCGATGATGTTGACCCCGCCCGGACCTCATCATCCGCACACTCAGCTCAGTATGCAGGAACTGCAAAAGAaacaacaacagcagcagcagcaacaacaaaTGTCACTGCATTCGCCGCATCATCAGATGGCACCGTCACCTCTTCGAAGTCTTCATCCGCATATTTCACCAAGCGTATACGAGATGGCCGCTCTTACGCAGGATCTCGACACACAGACGATCACCACGAAGATCAAGGAAGCGTTATTGGCGAACAACATCGGCCAGAAGATCTTTGGCGAAGCCGTTCTCGGTTTGTCGCAGGGCTCCGTCAGCGAGCTGCTGAGCAAACCGAAACCGTGGCATATGCTCAGCATAAAAGGCCGGGAACCTTTCATCAGGATGCAGCTTTGGCTGTCAGATGCGCACAATATCGATAGACTCCAGGCGTTGAAGAACGAACGACGGGAGGCAAACAAGAGACGACGCAGTAGCGGTCCAGGTCACGACAATAGTTCTGATACTTCGAGCAACGATACCGCCGAATTTTATCACGCGGCATCACCTGGTCCGGGACCTACTACCGGCAAAAAGCAGCGTGTTCTCTTCTCGGAAGAGCAGAAGGAGGCTCTCAGACTCGCCTTTGCTCTGGATCCATATCCGAACGTGGCCACCATCGAATTCCTTGCCGGTGAACTCGCCTTATCTTCAAGGACGATAACGAATTGGTTTCACAATCATCGAATGAGACTGAAGCAGCAGACGCCGCATGGCCAGCCGGAGCCGCAATCGCCGCGAGAACCCGGCCAACCATTCGACCCTGTTCAATTCAGATTGCTATTGAACCAAAGATTGCTGGAGATTCAGAAGGAGAGACTAGGTTTAGGAAATGTACCCTTACCTTATTCTCCATATTTTAATCCCAATTTAGCGGCTCTGGTGGGTAACGCGCTGAAAGAACAATGTTCCGGCCTCGATCTCTCGATGAACGCCCTGAAGAGAGAACCGAATCAGGAATTTGAAGATGAGGATGTTGAAGATGCGATGAGTAATCTCGGTAGCGAAGATTCGGAGGGTTCGGCCGGCAGTATAAAGAGAGAGCCCACAGAAACGCCGACGGCACCCACGACGGTCAGGTCCAATAGAAGGAAACCCGCGGCACCGCAATGGGTTAATCCGGAGTGGCAAGAACCGACGAGAGCAGGTGACGAAGTCATCATTAACGGCGTTTGCGTGATGCAAACGGATGACTACGGTGTGAAAAGGGAGACTGAAGAGACCATAAGAGTCGAGCCAACCCCGGTGCAGGACCGATACGAAGAGGATGTCCAGAGTGATGTTTCCTCCGTATCCGGTAACAATGGGGCTGATCGGGATAGTCCACTGCCCAGTCCAAAATCCGGTCAGAATAGTCCAACGACGTTGCTTAGACCATCGTCGGCGCAACAAACGCAACAGTCCACGGAAGGAAGTCCGAAGGATGTGGTAAAGCACGAACCCGAGGAAACGTGGGATTACTAG
Protein Sequence
MPAFARGPQDGGPPEMSDERLAHILSESSHMQMRGEHEVSNDADSKSPSRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRPREFSSAIFPHFFSGTQGGLQGIERTQEDIRLALDAYHRELQKLNSAPGQNPSMAGLPGLPGLPGLLALQQQALQQHHLAANGGGGGGAVQDLSLGKIDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFASAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAQHQQENQMQLGPPQQSPQLPPHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRAGDEVIINGVCVMQTDDYGVKRETEETIRVEPTPVQDRYEEDVQSDVSSVSGNNGADRDSPLPSPKSGQNSPTTLLRPSSAQQTQQSTEGSPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01390979;
90% Identity
iTF_00765420;
80% Identity
iTF_01245109;