Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: -
Assembly: GCA_963920685.1
Location: OY987334.1:65868471-65874255[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.5 1.6e+02 6.0 0.1 2 23 321 343 321 343 0.93

2 15 0.00018 0.06 16.8 0.1 2 23 399 421 398 421 0.95

3 15 3.6 1.2e+03 3.3 0.1 1 21 427 447 427 448 0.91

4 15 0.0077 2.5 11.7 6.5 1 23 545 568 545 568 0.96

5 15 0.14 46 7.7 1.7 2 23 575 597 574 597 0.94

6 15 0.012 3.8 11.1 3.6 1 21 689 709 689 710 0.95

7 15 0.018 5.9 10.5 0.9 2 23 722 744 721 744 0.94

8 15 0.33 1.1e+02 6.6 0.7 1 23 747 770 747 770 0.96

9 15 0.079 26 8.5 0.2 1 23 801 824 801 824 0.97

10 15 0.77 2.5e+02 5.4 0.1 2 23 831 853 830 853 0.91

11 15 0.05 16 9.1 0.5 2 23 862 884 861 884 0.94

12 15 0.12 39 7.9 0.0 3 23 891 912 890 912 0.96

13 15 7.9 2.6e+03 2.2 4.9 3 23 1090 1111 1089 1111 0.95

14 15 0.24 79 7.0 0.3 2 23 1118 1140 1117 1140 0.94

15 15 2.5 8.2e+02 3.8 0.7 1 23 1153 1175 1153 1175 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.5	1.6e+02	6.0	0.1	2	23	321	343	321	343	0.93
2	15	0.00018	0.06	16.8	0.1	2	23	399	421	398	421	0.95
3	15	3.6	1.2e+03	3.3	0.1	1	21	427	447	427	448	0.91
4	15	0.0077	2.5	11.7	6.5	1	23	545	568	545	568	0.96
5	15	0.14	46	7.7	1.7	2	23	575	597	574	597	0.94
6	15	0.012	3.8	11.1	3.6	1	21	689	709	689	710	0.95
7	15	0.018	5.9	10.5	0.9	2	23	722	744	721	744	0.94
8	15	0.33	1.1e+02	6.6	0.7	1	23	747	770	747	770	0.96
9	15	0.079	26	8.5	0.2	1	23	801	824	801	824	0.97
10	15	0.77	2.5e+02	5.4	0.1	2	23	831	853	830	853	0.91
11	15	0.05	16	9.1	0.5	2	23	862	884	861	884	0.94
12	15	0.12	39	7.9	0.0	3	23	891	912	890	912	0.96
13	15	7.9	2.6e+03	2.2	4.9	3	23	1090	1111	1089	1111	0.95
14	15	0.24	79	7.0	0.3	2	23	1118	1140	1117	1140	0.94
15	15	2.5	8.2e+02	3.8	0.7	1	23	1153	1175	1153	1175	0.94

Sequence Information

Coding Sequence: ATGGACTTGAAGCTCTGCAGAATATGCAGACAAAGCGGCCACGATTTCATACACATTTTTAAGACCACAGGattgaaaaataaaatagaaacttGTCTTCCCATCATTGTTTCACCGCACTGCCTACTTCCAGATACTCTGTGTCCAGAATGCCTAAAAGCCATAGAAAACTTTTACGTTTTCCTGAAAAACTGCCTTCAGAACATTATTATACTTGAGTCCCAATTGGACATTCAAGAATCATGCTTAAAAACCAAGAGGAGAAAAGATAAGAGCTGCTATGTTGCTCTGCCCCTCTCCAGAGAAAACAAAAGTGTCCAAACCGAGGATTATTTGGATGTATTGCTTGGAACTAAGTTGGATTTTAAAGGTTGCAAGGAAGATTTCCCTCTAACAAGCAACTTTCTGAATGAAAATGTTGAGCAATATAAATGCAACAATGTTTTAGTCGACTATGAAGTGCATTCCGATTCAAATTCAAATGAATATGACACTGGCCTAACATCAGCACAAGTTATTTTTGGTGAAAAACTGAGGATTCAGAATAATTTTAACAATCTAGTTGAAAATATCTTGTGCAGAAACGATTCTCATAGAGCAGAAGTGACTGAACAAACTCTTATATCTGAAATATCTGAAAGAAAGAACTTGAAGAAGCGTAAAAGTGAATGCATTGAAAATTCTTCAACTAAAATATGCAGATTTGATTCTGGGAACAAGAGGAAATGCAGTAAACCCAAAAAGGTTGAGAAAACGTGTGAAATTAGTGAGAAAGACAGTAAAGTACATGGAATAAAGACAGAGGTAGATCCTGATGATTTTCAAGGACATGTACATGAAATAAAGACAGAAGTGAATACTGATGATGATTTTGAAGATCACCGTGATGGAGATTGTGATATGCTTAATGAAGAAGCTGTGAGAGGAAAACAAACAgCAAATTTATCAATTCTTTATGAAACTTGTCTGTTGTGTAACCTTGCATTCGAGGGTACCTCAAATTTGGCAGAGCATTTTGTAACAGTCCATGCAAGAGAATTTCCACAACGAAATTCAGTAGAGTTTCTTAAGGGTAGCACTGAGAAAAAGAAGAGGAACCTGCCAAGTTTGGTAAAAATTTCTGATTTGAGAAGGAGTGATTCTGTTGATGATGCTCAAATATTAGAGGAATCACACACCCTACCATCAAGAGTCACTTGTCCAAATTGCCCTGCCTCATTTATCACTAAATCTGAACTCTTCATACACCTACAGCTACGACATTCCGAAATTTCCACCTACTTGTGTGGAATGTGTCTCCGCCAAGTAAATTCCTTTGCAAATCTGAAAAGCCATGTTCAAATTTGCAGCAAAACCATACCCGTTTTGAACAGATATTATTGTAAAGTGTGCTATTTTGGAGAAGACAGCTATAAGAGTTTGGAGACACATGTGTTGGTGCATGGATTTTTATTGGAGATCTGTAGAAAAGAGATAAAGAATTTTGATCCGGAGGACTTCATACAAAAAAACCCTAATTTTGAAGTAAACGGCGCGTCACCACTTAAAAACTTTTCTTGTCTGGAATGCAACAGATCCGATTTTGATTCGTTTAGAAAGTTTTCAATCCATCGAAGGAACATACATTCTATCTATCATTGTGACTTATGCAATAAGTTCTATGGGAGGAACTCCCACTTATGGAAACACGTCCACAGGCTCCACAAGGGCCATCCGAGCATCACCTGTCAACTGTGCCTCAAAACTAGTGCTTCAAAGTATCATTTGGCCCAACATTTCTCGAAAATACACCAACTGAAAAGCGTGGTTTTAGATGAAGATCAAAATGGGATTCAGAAATTGAGTCAAATTGTTGATAATGCAAAAGCAAGTGTAAACAAGCAGGATTCCACTACAGATCCAGAGCATCAAAACAGTTCCCTGGATGGATCTTTCATTGAATACAGCCAATCAGAGAACGATAATTCCTTGGACGTTAAAATAGCGCCCAAAGAAATCGATCCTTCCCATGATTTGTATACGAACATTCTTACAAATTACACTCCCCCAAAAAATGAAGGGGACTTTAAGTGTCCCAAGTGTTCCAAGGGATTCCACAAGAGAATGCTGTTGAGGAAGCATAAGAAAAACTGCAGACCAAAGCTGCAAAAAGACCTTCTTACAAGATGCAAATCCTGCGCTAGGATCTTTAAAGATCGACAGAGCCTGGCCAAACATTTGATCAACTACCACTCCGACTACATGTGTGAGATATGCAGTGAAAAAGTGCCAAGCAAATGTGAAATTGTCACCCACATAAGGTTTCAGCATCCTTCAAGCTACTTGGTGTGCAGTGTGTGCGAAAATATCTTAAGGTGCAAGAAGGACTTGCTTGATCATCTTGCAGACCATGAAAATTCATATGTGTGTCAGTTTTGTGGCGACACTTTACCTAGCAAAGTGAAACTGAAAATGCACATCCTGAGCCTCCACAGAAAAATTCTCAGTCTCAGCTGCGGCATATGTCTAAAACTGTTCGAGAACCAAGTAGTTCTAAGAAATCACGTGACGTTAATCCATAAGGACCGCCTCGATCCTCTGACGTCGTGTCCTATATGCGGCAAAAACTACGGATCCAAGTGGAAAACGTTCGATCACGTAAACAAGAGCCACGGGAGATTCTTTAAGGCCTGCAAGATATGCCTAGATATATACGAATCGGAATCCCAGCTGGAGGCGCACATTAAGACTGTGCATATCACTCAACAAATTCCCATGAACAGTGTCGTTAGACCCAATCCGGCGGCACTTTTAAATGTTCCTGAGCCCGGTAAGGGTTGTGCCCTCAATTTGAACAATAATCAGAACGAGTTTGAGAGCGACAGCGATGACAATACCGAGGAGACGCAAAACAATACTCGGAGTAGTGAAAGTGAAGCAGATGAAGACAATAGCGGGCTGGAGCAACAAGAAAAGCTAAAGTCGCCTACAGAAAAGAATTTTTTGACACTCCCTtgtcaagaaaataaaatatcccTGCTGGAAAAGAGGCTCTTGGGAAAAGGAGTTGCTCAGAGTACTGTTGCAGGTGCAGGTAACTTTCAGAGCAAGCAATATCTGATTGGTAATGGTGGTACAGCTGTTGGTGTCATTAAAAAACTAGACTCGGGATTGCTGAAGATAAAGAAGGAGGAAGACAGCTGGACCTACGACAAAAAAAGTGACAGCAATCATTTGATTCATCACTCCAAAAGAACCGTTTACGTCAACAGCAATGATCCTTCTTTTTGCGAGATATGTCACAAAACGTGGCCTGCCAAAAAACATTTGTGGCAGCATTACATTAGGTGTCATAAGCGAGTGGCAGCCACTGTATGCGGCATATGTCTCAAAACGAACAAGAACTACGAGTCCTTGCAGACACATCTGAGAGAAATCCACCCCACCTTGCTGCACGGCCAAGGATTAGGCTCCAACTTTATTTGCCGAATTTGTGGAAGATATCACAACGCAAGTTCTAAATTGAGTCTACACATGGTCATCCACGAAAATTTCGATTGGACCTTGTTGGATCGATTCCCGCCTATTCTGAAGTATCAGCCGAACGTGAAGAACGCGTCCAAACAGAACGGACAGAAGCGGAATGGAAATGGGGTTCAGTATGAGCTCGTAGAGATAAATGAAACCGATCAAGCGAAAGTGGATGTTTTTAGCGGAAATGATGAAATGTACGATGCCATGATAGAGCAAGTGGAAGAGTCGTCCACGTCCAGCGAGACGGACACGACAACGAATAAACCTGCAGagtCCTCCAGTGATTCGGAAGAGGACAACGTGAACTCCGCACCGTCACGCGACAACAGTTGCCAAAATAAGCCGACTCCAACCGGAGAGCATGTCCTTTCGTTCAGCAATCTCTTACAAACACTGAAAAATCACAGTCAGTTCCACATTTTAAATCAGACTCATTCGGAATCGTTGTTAAACGCTGCCAGCTTTTCAGAAACCCCTTCCAAAAATATTCCTACTGCAAAGACAGATGGTAAATTTGATATTTCAAAGACAATGTCAAATAAATCACCATCCCCAAAGAATTTAGGTGAAATTCCAACCGAAAACGCTCAGTATGTAGGGCGCAGTTACTTAAGCGAAGAGTCTTCCTCTAGTATGAGCGATTGTGAGCAAGATGGCGACAGGAATAGTCAAGATGATGGTCAGGATAGTCAAGATGGTGGTCAGAGTTCGGTGCTAGAAGATGCGACGCAAGAATCGCAGGGCAGTGACCATAGCGGTGATGAGATGGCGGTGCAAGACGGAGGGGTCTCTAGACATCTTTTGAGACCGAAACCTGAAGAACTGGATTCTGCAATTAAATCCATCAGTGACACGTGCGCTGCGCCTGTGATCGTGACGAATTACAATGATTTTTCTGAGCCAGGACAATCTGCCAACTGCCTAAACGACACGGAGATTGAGAACGCGGTGGGAAGTATACTTTAG
Protein Sequence: MDLKLCRICRQSGHDFIHIFKTTGLKNKIETCLPIIVSPHCLLPDTLCPECLKAIENFYVFLKNCLQNIIILESQLDIQESCLKTKRRKDKSCYVALPLSRENKSVQTEDYLDVLLGTKLDFKGCKEDFPLTSNFLNENVEQYKCNNVLVDYEVHSDSNSNEYDTGLTSAQVIFGEKLRIQNNFNNLVENILCRNDSHRAEVTEQTLISEISERKNLKKRKSECIENSSTKICRFDSGNKRKCSKPKKVEKTCEISEKDSKVHGIKTEVDPDDFQGHVHEIKTEVNTDDDFEDHRDGDCDMLNEEAVRGKQTANLSILYETCLLCNLAFEGTSNLAEHFVTVHAREFPQRNSVEFLKGSTEKKKRNLPSLVKISDLRRSDSVDDAQILEESHTLPSRVTCPNCPASFITKSELFIHLQLRHSEISTYLCGMCLRQVNSFANLKSHVQICSKTIPVLNRYYCKVCYFGEDSYKSLETHVLVHGFLLEICRKEIKNFDPEDFIQKNPNFEVNGASPLKNFSCLECNRSDFDSFRKFSIHRRNIHSIYHCDLCNKFYGRNSHLWKHVHRLHKGHPSITCQLCLKTSASKYHLAQHFSKIHQLKSVVLDEDQNGIQKLSQIVDNAKASVNKQDSTTDPEHQNSSLDGSFIEYSQSENDNSLDVKIAPKEIDPSHDLYTNILTNYTPPKNEGDFKCPKCSKGFHKRMLLRKHKKNCRPKLQKDLLTRCKSCARIFKDRQSLAKHLINYHSDYMCEICSEKVPSKCEIVTHIRFQHPSSYLVCSVCENILRCKKDLLDHLADHENSYVCQFCGDTLPSKVKLKMHILSLHRKILSLSCGICLKLFENQVVLRNHVTLIHKDRLDPLTSCPICGKNYGSKWKTFDHVNKSHGRFFKACKICLDIYESESQLEAHIKTVHITQQIPMNSVVRPNPAALLNVPEPGKGCALNLNNNQNEFESDSDDNTEETQNNTRSSESEADEDNSGLEQQEKLKSPTEKNFLTLPCQENKISLLEKRLLGKGVAQSTVAGAGNFQSKQYLIGNGGTAVGVIKKLDSGLLKIKKEEDSWTYDKKSDSNHLIHHSKRTVYVNSNDPSFCEICHKTWPAKKHLWQHYIRCHKRVAATVCGICLKTNKNYESLQTHLREIHPTLLHGQGLGSNFICRICGRYHNASSKLSLHMVIHENFDWTLLDRFPPILKYQPNVKNASKQNGQKRNGNGVQYELVEINETDQAKVDVFSGNDEMYDAMIEQVEESSTSSETDTTTNKPAESSSDSEEDNVNSAPSRDNSCQNKPTPTGEHVLSFSNLLQTLKNHSQFHILNQTHSESLLNAASFSETPSKNIPTAKTDGKFDISKTMSNKSPSPKNLGEIPTENAQYVGRSYLSEESSSSMSDCEQDGDRNSQDDGQDSQDGGQSSVLEDATQESQGSDHSGDEMAVQDGGVSRHLLRPKPEELDSAIKSISDTCAAPVIVTNYNDFSEPGQSANCLNDTEIENAVGSIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -