Pter125964.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987334.1:67504610-67518273[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0075 2.5 11.7 0.9 1 23 1192 1214 1192 1214 0.97 2 11 0.41 1.3e+02 6.3 5.3 1 23 1223 1245 1223 1245 0.96 3 11 9.5e-05 0.031 17.7 6.3 1 23 1254 1277 1254 1277 0.98 4 11 0.00081 0.27 14.8 0.8 1 23 1284 1306 1284 1306 0.99 5 11 0.24 78 7.0 2.6 3 23 1313 1334 1311 1334 0.91 6 11 0.16 51 7.6 1.3 1 23 1342 1365 1342 1365 0.95 7 11 3.4 1.1e+03 3.4 4.2 1 23 1373 1396 1373 1396 0.91 8 11 0.00031 0.1 16.1 4.1 1 23 1405 1428 1405 1428 0.96 9 11 0.18 57 7.4 3.8 1 23 1437 1460 1437 1460 0.95 10 11 0.47 1.5e+02 6.1 2.0 2 23 1466 1487 1465 1487 0.96 11 11 0.02 6.6 10.4 0.1 2 23 1496 1518 1495 1518 0.96
Sequence Information
- Coding Sequence
- ATGGAAAAGGCTACAGCGGAACTTGATGGCACGTTAGTTTTTAACTATATTATTGAAATTGAAGACGATGATGATGATGTACAGATACAAGAAACTCTGGGCATAGTCGAGGAACCAAAATTAGAAACAAGCTTTGATGAAAACCAGAACCCGAAGGCTAGGACTGAAGAAACTCCTAAAAAAGATAAAGATTTAGTAGTGTGTCTGGAAAAACGCAGTCTACCGTCAAGGAAATTAAAGAATGCTATAGAAGGAGATAAGGTAATTAATACTAATGACTGCAAGACTGTAAAATCAGATTCCTTAAAGGACACAAGTGGGTTTCAATCTAAAAGTCGTACAGAAGTAGATAGAATTGGTTTAAGGACAAAAAGAGGGAGATCTTCTGAAATTGCCAAGGATTTAGGGTCCTCTAAAACCAAGAAACTTAAAACTAAAGGTGCAGTCGTAAATGCTGAAAAATCTTATGATCCTATTGACACAAAAAATCCCCAATCCTCTAAACCTAGGAGGGGTAGACCTAAAACTACCTTAGGAGCAAATAAACAAGTTGCTGTTGCTGAAACTAAGGTTTTGGTCAATCCTAAACCTAAGCGAGGCAGACCCAAACGAGAAGGACTAAAGACACTGAATACCTCTGTGGCGTCAGGTGAGTTACAACCTCCTTTAACTAAAACCAGTGCAGAAACAAGTAAACAGCATGGTGTTGTGCCTAGTAAGAATATATCCCTCTTAGCACATAAACGAGGTAAACGCAAGGGTTTAGGGTCAAAGAAAGTAGACAGTTTTGCTAAAGATATAGATGCTTTGTTAGATTTGGCCAAGTTACGGCTTTCCCAGGACACAAGTTCAGAAGCTCGACCACTAAATGCTATTGAAGAATCTTCAGGGACTACTAAACCCAAGAGAGGCAGACCTAGAGTAAAGAAAGATAATCCTGTCATACCGCTTTCTACCTCTGAAAATGAGATGGGTGGTTCAGTAGCAAACCACCAAGATCCTTCTGTTGTACGCAGTGAGAATAACAATCATTTAGATTCATCCAAAACTGTAACATTGACTGCTCTTGGTTTGAAAGCAAATGCTTCTATTAAAGACTCATTAGGGGTTTCTGACCCTCAGACCCCTGAAGTTGGAAATGCAGGTCACAAGAAATTGAAAACTGATGTGAGATTAAAGTATTTAGTACCCCCCAAAGGACGGAGGGGAAGACCTAAGGGTTTTAAAGTAAAGAAGGTGACTCTCTGTGTGACAGATAAAAATTTGGATGGTAAAGAAGTGGAGGAGGTAACTTTGGAAACTAAACCAACGAGTTCTTCTGCTGAAAACAGAGTTTTAGAATCTTCACAACCTAACACAACGAAGACAACTGGATTGAATGTGCAGCAATTAATTGCTCATATGGCAAAGAATATAGCGGAGGTTTCAAAACCAAAAGAATCTCAAGATAAAGATTTAGGAGGGATAAAATTGAATCCTACACCTAATGATGCCAGAAAAGAAGCCCCTAAAGCTAAGAGGGGCAGGGCAAAGAAAATAGTTAATCCTGTTGCAGATTTGCAAGCTAACAAAACTAAGATTACTGGACCAAAACAGCTGAATACtcctacaaatttaaaaaatctagCAACTGTCCAATCTAGTACAGCTGTAGCTGAAGAAGTACCTGTAATGAGATTTTATGCAAAACCTAAAGGTAATGGTTCAAAAGACAAGCAACTTAATGCCGCAATAGAGACCATAGATTTGGAAGCACCTAAGAGAGTGGAAACTAAAGGTTTGAGTACTGTAGCTAAAAATCTAAAGCTCCCCAAAGTTAAAACTGGGAATAAAGGAAAAAAAGGTCTTTCAGGCAAACAACAGGGTGCTGCAGTAGTAACTATAGATTTAGAAGCACCCAAAGTTAAAAAAGCTAAAAGTAAATGCTTGGAACCAAAAACAATTAATGATTCTGTTAATAGTAAAGACTTGGagatttctaaaactaaaaaaatcattttagAGGCACCCAAAGTTAAAAAAGCTAAAAGTAAATGCTTGGAACCAAAAACAATTAATGATTCTGTTAATAGTAAAGACTTGGagatttctaaaactaaaaaaattattttagaggCACCCAAAGTTAAAAGAGCTAAAACTAAATGCAAGGGATCAAAAACAAGTAATGATTCTGCTAGTGCTAAAGGCTTGGAGACTTCTAAAGctaaagaaatcataaatttagaGGCACCCAAAGTAAAGAGAGCTAAAAACAAACGCTTGGGAACACAAACAATTAAACATCCAGCTAGTGCTAAAGGATTGGAGACTTCTAAGGCATCTTCAAGACTGTCGGATGGAACTAAAAAAGTGGTTCCTTTACGTCTAACCAAAGTGGTGGTAATAAATTTAGAAGCTGAAAAAAAATATGATGATATTGAACAAATTATAGATCTGCAGCTCCCCAAACCTAGGAAAACACCCTTAGAAACCAGAAAGTCTCTAAGAAAGGGGAAAGCTGTTTTAAGAGCTACTGCTTCCACATCTCAGAAGAGTATAGAGACTATCGACCTAGAGCTTCCAAATACTAAAAAACGTATAAACCGAGGTTTAGAGTTGAAGAAACCAATGAATATTGAGAAGTCCAAAGAGCCAGAGCCGATTAACGTTGAGGAAATTAAAGCTGATGATGGTGAGAACAATAATTTACAGCCTAAACCCAAAGAGGATATTAAGGGGAAGAGAAAACTCAGTAATGGGGGAAGTAAAGACTTTAAGTTCCCGAAACCAAAGAGAGTTAAGAGGCTAAGCGCTTTTCTGGCACCCAAGCTTGCTAAATCTGAAGGACCTGACACTAAAGTTGTAGAACCCAAACAAGATGCTTCTGTTGGAACCAAGGATTTGGAGCCCCTTCAAGTAAAAGAAGCAGAAGTGGCAAGTGCACCAGGAAGGCCCTCAATGTGTACTGTAGGGACACAAACCTTAGAGGATGAGGACGACAAAGAAGAGATTCCCAAACCACCTGAAGTCAAAAGGAAAACATCAGTTAGTTCTGTAGGAACTCAAGTTTTAGAGTCTCCAATACTGAACAATTCTGAAAGTAAGGATCTGGGAGGAGGCAAGACCCCTACTAGTTCTGTTCCAGGTTTGACTGGCTCTACAACTGCTAAAAGCACCGGAGAGAACAGGCCAAATCCTTCTGTAGGGAAACATCCTTTTGATGCTGCACAGCCCAAAAAAGGGAATGCTTCTGAGGGTGGAGGCCAAAATgaagataatgatgatgatgatccaTTCAAAATTGAGGGAAGCAATTTAAATGCTGATGTGATACAGATTCCAGCATCTACCTCCCAGGATAGTCAAGAACTTGGTGTCAAATATGAAACTGTTGAACAAATCCATACGGAATTCAAATACGAATCTCAAAGTGAAACTGAGCAAATGATGAAAAAGAGACGGGGAAAATTGGGGGGTCCCATGCGTGGGAGGAGAAGAGGTGCCAAATTGGAGGGACAGACGACCATTGACGATTTCTTTAGGATTGTTGATCTGAATGGAAAAATACAACTGAAATGCAGGAATCAGATCTTCAAATGCGACCACTGCCTCTACGTAGGCAACTCCAAGGCTAACTTGGAGCGTCACAGTTTGATCCACAGGAACCCGGATGAAATCATCTGGTTCCACTGCACGGAATGCCCGTATAAATCCAAATACGAGCACCAGTTAAAAAGCCACTTTTTGATCCATCTTAAGCCGGATCAGATCCACTTTTTTCAGTGTCCTCACTGCGAAGTGAAGTGTTCCAGGAAGCACAATTTGACCAATCATATTAGGAGTATTCATGCCGACAGAGAATATTCATTTAAATGTGCGGAGTGCGACTACACCACTTTCTCGAAAGACCGCCTGGTGGCGCACATCAGGAAACATTCAAAAGAAGTGCACGCCTGCATCAAGTGCAAGTTCGTGACCAAGAGAAAGGAATATTTAGAGTCCCATATCAAGATGAAGCATATGGAGGAGGTGCCGAGGCCGTTCCCTTGCGACACCTGTTCGTACAAGGGCAAGACGAAGCGGGAGCTGGACAAACACTACGACCGGATGCACAACAAAGACCAATTGCATGTGTATCAATGCAATCATTGCCCGTTCAACTCCATCTATAAGAAGAACTTGGAGTTCCACCTGCTTCACATGCACAACAACTCGGAGGGTTTCCAAAAGTTCATCTGCGGACATTGCCAGAAAAGTTTCTCCTACAAGAATGGTCTCAAAGTGCACATCATCCGTTGCCACATCAAATTGCCTGATGCCGATTGGCACAAGTGTATTGAATGCAAATACAAATCCAAAGACGTGTCGACATTAAAGCGACACATCAAACGAAACCACGGAGCCCCCAGGTTGCACTGCAAACTGTGCAGCTTCGCTACCAACAGACAGACATCTATGGAGGCCCATGGCAAAACACACGAGTATGACAACGAGGATATTTTGAAGTGCCCCGAATGTCCATACAGGATCATACAAATGAGTTCCTTCCTCTATCACATGAAGGTGATCCACGGGAAGCCAATCACTTCAAAGGAGGGCGAACAGTATTACATGCAGGACGAGTAG
- Protein Sequence
- MEKATAELDGTLVFNYIIEIEDDDDDVQIQETLGIVEEPKLETSFDENQNPKARTEETPKKDKDLVVCLEKRSLPSRKLKNAIEGDKVINTNDCKTVKSDSLKDTSGFQSKSRTEVDRIGLRTKRGRSSEIAKDLGSSKTKKLKTKGAVVNAEKSYDPIDTKNPQSSKPRRGRPKTTLGANKQVAVAETKVLVNPKPKRGRPKREGLKTLNTSVASGELQPPLTKTSAETSKQHGVVPSKNISLLAHKRGKRKGLGSKKVDSFAKDIDALLDLAKLRLSQDTSSEARPLNAIEESSGTTKPKRGRPRVKKDNPVIPLSTSENEMGGSVANHQDPSVVRSENNNHLDSSKTVTLTALGLKANASIKDSLGVSDPQTPEVGNAGHKKLKTDVRLKYLVPPKGRRGRPKGFKVKKVTLCVTDKNLDGKEVEEVTLETKPTSSSAENRVLESSQPNTTKTTGLNVQQLIAHMAKNIAEVSKPKESQDKDLGGIKLNPTPNDARKEAPKAKRGRAKKIVNPVADLQANKTKITGPKQLNTPTNLKNLATVQSSTAVAEEVPVMRFYAKPKGNGSKDKQLNAAIETIDLEAPKRVETKGLSTVAKNLKLPKVKTGNKGKKGLSGKQQGAAVVTIDLEAPKVKKAKSKCLEPKTINDSVNSKDLEISKTKKIILEAPKVKKAKSKCLEPKTINDSVNSKDLEISKTKKIILEAPKVKRAKTKCKGSKTSNDSASAKGLETSKAKEIINLEAPKVKRAKNKRLGTQTIKHPASAKGLETSKASSRLSDGTKKVVPLRLTKVVVINLEAEKKYDDIEQIIDLQLPKPRKTPLETRKSLRKGKAVLRATASTSQKSIETIDLELPNTKKRINRGLELKKPMNIEKSKEPEPINVEEIKADDGENNNLQPKPKEDIKGKRKLSNGGSKDFKFPKPKRVKRLSAFLAPKLAKSEGPDTKVVEPKQDASVGTKDLEPLQVKEAEVASAPGRPSMCTVGTQTLEDEDDKEEIPKPPEVKRKTSVSSVGTQVLESPILNNSESKDLGGGKTPTSSVPGLTGSTTAKSTGENRPNPSVGKHPFDAAQPKKGNASEGGGQNEDNDDDDPFKIEGSNLNADVIQIPASTSQDSQELGVKYETVEQIHTEFKYESQSETEQMMKKRRGKLGGPMRGRRRGAKLEGQTTIDDFFRIVDLNGKIQLKCRNQIFKCDHCLYVGNSKANLERHSLIHRNPDEIIWFHCTECPYKSKYEHQLKSHFLIHLKPDQIHFFQCPHCEVKCSRKHNLTNHIRSIHADREYSFKCAECDYTTFSKDRLVAHIRKHSKEVHACIKCKFVTKRKEYLESHIKMKHMEEVPRPFPCDTCSYKGKTKRELDKHYDRMHNKDQLHVYQCNHCPFNSIYKKNLEFHLLHMHNNSEGFQKFICGHCQKSFSYKNGLKVHIIRCHIKLPDADWHKCIECKYKSKDVSTLKRHIKRNHGAPRLHCKLCSFATNRQTSMEAHGKTHEYDNEDILKCPECPYRIIQMSSFLYHMKVIHGKPITSKEGEQYYMQDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -