Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: zfh1
Assembly: GCA_963920685.1
Location: OY987329.1:141812228-141829727[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.012 4.1 11.0 1.0 2 23 54 76 53 76 0.96

2 7 0.0064 2.1 11.9 0.4 3 23 107 127 105 127 0.95

3 7 1.3e-05 0.0042 20.4 0.6 2 23 134 155 133 155 0.97

4 7 2.4e-06 0.00078 22.7 5.9 1 23 164 186 164 186 0.99

5 7 0.0001 0.033 17.6 1.0 1 21 192 212 192 213 0.95

6 7 0.014 4.7 10.8 0.7 1 19 487 505 487 505 0.97

7 7 1.4e-05 0.0045 20.3 1.4 1 23 842 864 842 864 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.012	4.1	11.0	1.0	2	23	54	76	53	76	0.96
2	7	0.0064	2.1	11.9	0.4	3	23	107	127	105	127	0.95
3	7	1.3e-05	0.0042	20.4	0.6	2	23	134	155	133	155	0.97
4	7	2.4e-06	0.00078	22.7	5.9	1	23	164	186	164	186	0.99
5	7	0.0001	0.033	17.6	1.0	1	21	192	212	192	213	0.95
6	7	0.014	4.7	10.8	0.7	1	19	487	505	487	505	0.97
7	7	1.4e-05	0.0045	20.3	1.4	1	23	842	864	842	864	0.95

Sequence Information

Coding Sequence: atgtcaggtGAAATTTGTCATGAAAAATCAAAGAACctatttaaaaatgaagaaattaGGATAGAGCCATTATTTAAAGCACCTGGAATTCCTCCAATTCTAACTAACGGGACCTTAAAGGAAGCGGAAGAACTCAATGCGAATTCAGAATACTTCATCAAATGCCCACAATGCCAGAAAGGATGTCAGAGTTTTCAAGCCTTGAAGGAGCACATGGAAATATCGCATGCCGATTTGACAGCTTCCTCGGAAAACAGTCTGTCAGTGGCCAGTGCCATATCGCCCATACCCCTGGCCGGTCCAGGAGGCCCCTATGGCTGTTCCCAGTGTAGCGCATCCTTCTCCTCCAAGGAACAAATGGAGAAACACGAGCTGTTACACTCACCAAATGCTCAAGTGTCCTGTAAAATCTGCAACAAGACTTTCGCAAATGTCTATAGGCTACAAAGACACATGATTAGCCACGACGAGAGTGCGAttctaagaaaatttaaatgtacAGAATGTGATAAAGCTTTTAAATTTAAACATCATCTTAAGGAACACATACGAATACATAGCGGTGAAAAACCATTCGAGTGTGGAAACTGCGGCAAACGCTTTTCACATTCAGGCTCATATTCTAGTCACATGACCTCAAAGAAGTGCTTGGTAATGAATCTCAAACTGGGAAGAACCCGAGCTCCCATGAATAACGCATTGTTAGACAAGAACGTTCAATCGAATCTCAAGGGACCTAAGCGGCCCCCTATAAGccccataaataataatataaccacTAGTCCTAATCACAATTCTCCGTATATGCCCATCTTGCCCAAATATTCTGAAGCAGCGGCTGCTTTATTTCAATCTCAGCTTGCAGGAAATTCGTCTATGACCCCGTTTTACTTAACACCTCATAGTCTTCTTAACGCTGGCCACTCTATCAGTCCCTATACCGTTCCTGCTTTAGGTCACTTGCTTGAACAGCTTCAacagcaacaacaacaacaacaacaacagcaACAACAACAGCACCAGCAACATAATATATCTAGTCCTGTAAGAAGTTCGTTTATGGATACTTCCGGGAGCAGCATCCCCGCTGATGATTCGAGCAGACCTCAGGATGATAGAGTGAGCGTAACTGTTTCGGAACCAAACCACAGACCAGAAGATTTTGACGAGATGTCAAAGTCTAATGCCTCTGAATGTGATGAGTTGGTAATGGATGAGGATGCTGACAATCACAACAGCGCACATACCAAAAGTGGCAACAAATATTTCGAAGAGCCACAAGATCATCAACAGCAGACCCAAACAAACATCGGCGATCTGGATGCGGTTAAACGAATCCTGGAAACAGTTAACGCAACTGTTACTAAAGAACTTTTGCAAGCGAATGCTCAAAAGTTAGCTTCGGATTCTTCAAGCGACGCTCACAGCATTGCTTCCGTACATTCCCCGAAAGAAAGCTTTTCATGTGCTCACTGTAGCAAAGCATTTGATTCAGCAATTCATCTGGAAGATCACGATTGTAAGGACGCTCAAAGCGAAGGCTTGGCTGCGAAGCTGGAGGCTGCATTAACTCCAAAATCTGATCATGGTTCTAACGAGAATATGAGTGGAACCGAGGACCAAGATTTTGAAAGATCGAGTTATCATACCAATGATGAGATGGACTCTGAGAACTATACGACGACGGACCATGTTAACGAGGATGGCAGGAAAGTTCGTGTGCGGTCATTGATCTCCGAAGAGCAACTGAAGATACTCAAGGATAATTACAAAAGCAATCCTAGACCAAAGCGAGAAGATCTTGAAAAAATTGCTGCTAGTATTGGGTTTCCAGTTCGGGTGGTTCAAGTGTGGTTCCAGAATACGAGAGCAAGAGACAGAAGAGAAGGAAGACTTATTCAGGTCCCCTACAGTCCAGTCGCATCAGGATCTCGATACTCCGTGCCTTTAACACCTGTGGGTCAATCCGTAATGTCACATTCGCCTCAATACATTTCCGAGCAGCCGCTTGATTTATCGTTGAAAAGAGAGTCGCACTCCAACGAGACTTCTCCTTCGTGCTCCCCTAAAAGACCCCATTCTGTTAATCATTCCGAATCTCACGACGAAGTGGTGAACTTAAGCCACAAGTCGTCTAGAAGCCCAACTCCTTACATGCCTTACCAAAACCATTTTCAGGGATCTAACTCTTCAGACCCGAGGCAGTCACCGTCGCCGCTGGAGTTTAACAGTAGCCGATTGGCTCAAATTCTAGCTCAACCTTCGCACAAGTTGGCCAATTTACCCGGCATGGGGCTAGTTCCTATGGACCATCTGATGCAGTTTGGTGCTCACGATTTGCCTAGCCTAACTCAGTTGATCAACAGTAGGATTTCGAGTCTCAGTCCCAATTCCAACCATTCGCTACATGAGGCCGTTCAGGACGAAGAAATGTTGCAGAATAAACGGGCCAAGGTGcaacagtttattttaaaaaacatggGAAGCCCCGCCCTGGGCCAGGAGGCTGAATTGGAAGGTCAGTTTCAATGCGACCAGTGTGATAAGGCGTTTAATAAGCAGAGTTCGCTGGCCAGGCACAAGTACGAACATTCTGGTGAGTTTTAA
Protein Sequence: MSGEICHEKSKNLFKNEEIRIEPLFKAPGIPPILTNGTLKEAEELNANSEYFIKCPQCQKGCQSFQALKEHMEISHADLTASSENSLSVASAISPIPLAGPGGPYGCSQCSASFSSKEQMEKHELLHSPNAQVSCKICNKTFANVYRLQRHMISHDESAILRKFKCTECDKAFKFKHHLKEHIRIHSGEKPFECGNCGKRFSHSGSYSSHMTSKKCLVMNLKLGRTRAPMNNALLDKNVQSNLKGPKRPPISPINNNITTSPNHNSPYMPILPKYSEAAAALFQSQLAGNSSMTPFYLTPHSLLNAGHSISPYTVPALGHLLEQLQQQQQQQQQQQQQQHQQHNISSPVRSSFMDTSGSSIPADDSSRPQDDRVSVTVSEPNHRPEDFDEMSKSNASECDELVMDEDADNHNSAHTKSGNKYFEEPQDHQQQTQTNIGDLDAVKRILETVNATVTKELLQANAQKLASDSSSDAHSIASVHSPKESFSCAHCSKAFDSAIHLEDHDCKDAQSEGLAAKLEAALTPKSDHGSNENMSGTEDQDFERSSYHTNDEMDSENYTTTDHVNEDGRKVRVRSLISEEQLKILKDNYKSNPRPKREDLEKIAASIGFPVRVVQVWFQNTRARDRREGRLIQVPYSPVASGSRYSVPLTPVGQSVMSHSPQYISEQPLDLSLKRESHSNETSPSCSPKRPHSVNHSESHDEVVNLSHKSSRSPTPYMPYQNHFQGSNSSDPRQSPSPLEFNSSRLAQILAQPSHKLANLPGMGLVPMDHLMQFGAHDLPSLTQLINSRISSLSPNSNHSLHEAVQDEEMLQNKRAKVQQFILKNMGSPALGQEAELEGQFQCDQCDKAFNKQSSLARHKYEHSGEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00443837;
90% Identity: iTF_01239483;
80% Identity: iTF_01241704;