Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: -
Assembly: GCA_963920685.1
Location: OY987328.1:148542584-148550778[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.037 12 9.6 0.5 2 23 182 204 181 204 0.97

2 21 2.1 6.7e+02 4.1 5.5 1 21 491 511 491 512 0.94

3 21 2.8 9.3e+02 3.6 6.8 1 23 541 564 541 564 0.96

4 21 6.7 2.2e+03 2.5 0.9 1 19 597 615 597 620 0.88

5 21 0.00012 0.038 17.4 1.0 2 23 711 732 710 732 0.98

6 21 0.22 72 7.1 0.1 1 23 755 777 755 777 0.90

7 21 0.00033 0.11 16.0 0.4 2 23 781 802 780 802 0.96

8 21 0.019 6.3 10.4 0.1 2 21 834 853 833 854 0.92

9 21 0.0014 0.47 14.0 0.1 2 23 891 913 890 913 0.94

10 21 0.0057 1.9 12.1 0.5 2 23 926 947 925 947 0.97

11 21 0.03 9.7 9.9 1.5 2 23 961 982 960 982 0.97

12 21 0.00053 0.17 15.4 4.6 1 23 1021 1043 1021 1043 0.98

13 21 0.85 2.8e+02 5.3 0.2 3 23 1061 1082 1060 1082 0.91

14 21 0.00031 0.1 16.1 0.8 1 23 1107 1129 1107 1129 0.98

15 21 0.0012 0.4 14.2 0.8 2 23 1146 1168 1145 1168 0.95

16 21 0.028 9 9.9 0.6 1 19 1187 1205 1187 1209 0.95

17 21 2.1 6.7e+02 4.1 0.1 1 23 1257 1280 1257 1280 0.94

18 21 0.013 4.2 11.0 1.2 2 23 1291 1312 1291 1312 0.97

19 21 0.00021 0.07 16.6 1.4 1 23 1355 1378 1355 1378 0.95

20 21 1.2e-05 0.0038 20.6 0.7 1 23 1386 1408 1386 1408 0.97

21 21 0.00082 0.27 14.7 0.6 1 23 1430 1453 1430 1453 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.037	12	9.6	0.5	2	23	182	204	181	204	0.97
2	21	2.1	6.7e+02	4.1	5.5	1	21	491	511	491	512	0.94
3	21	2.8	9.3e+02	3.6	6.8	1	23	541	564	541	564	0.96
4	21	6.7	2.2e+03	2.5	0.9	1	19	597	615	597	620	0.88
5	21	0.00012	0.038	17.4	1.0	2	23	711	732	710	732	0.98
6	21	0.22	72	7.1	0.1	1	23	755	777	755	777	0.90
7	21	0.00033	0.11	16.0	0.4	2	23	781	802	780	802	0.96
8	21	0.019	6.3	10.4	0.1	2	21	834	853	833	854	0.92
9	21	0.0014	0.47	14.0	0.1	2	23	891	913	890	913	0.94
10	21	0.0057	1.9	12.1	0.5	2	23	926	947	925	947	0.97
11	21	0.03	9.7	9.9	1.5	2	23	961	982	960	982	0.97
12	21	0.00053	0.17	15.4	4.6	1	23	1021	1043	1021	1043	0.98
13	21	0.85	2.8e+02	5.3	0.2	3	23	1061	1082	1060	1082	0.91
14	21	0.00031	0.1	16.1	0.8	1	23	1107	1129	1107	1129	0.98
15	21	0.0012	0.4	14.2	0.8	2	23	1146	1168	1145	1168	0.95
16	21	0.028	9	9.9	0.6	1	19	1187	1205	1187	1209	0.95
17	21	2.1	6.7e+02	4.1	0.1	1	23	1257	1280	1257	1280	0.94
18	21	0.013	4.2	11.0	1.2	2	23	1291	1312	1291	1312	0.97
19	21	0.00021	0.07	16.6	1.4	1	23	1355	1378	1355	1378	0.95
20	21	1.2e-05	0.0038	20.6	0.7	1	23	1386	1408	1386	1408	0.97
21	21	0.00082	0.27	14.7	0.6	1	23	1430	1453	1430	1453	0.94

Sequence Information

Coding Sequence: ATGGCCTCTCTACAGGCATCCGCGGCAAGCGGCAATCTACAAATGAGCGGTTTTATCAAACACGGGCGACCCCTACCAAACAAGACGGGCAAGGTGGATACAGAATTAACACAAATCAGTTCCACATCAGAGTTGAAAGCAACCAGACGGGCTCCCTCGTGGTGTTTATACGAGgtCACCAAAAATGACAAGTTACCAATCATGGTATGCAACGACTGCATCATCAGATTGGACACTTGGTATTCCTATAAAAAGCAATGTCACAGAAACCAGGCAAAACTGGCAGAATGGCTAAGCAAATCAACCGGGCAAAACGTATTAGATGTGagtATTCAAATTAAATCCGAACCACTTGATATGGATGGACCCCGTTATGGACATGCGCCTATTAAAACGGAATATCCCAACCCCAGTTACGGTGACATGATGGACGTAGAATTTAACGAGTTGCCTCGTATAGTTACGCCCCAGAATCAAAGTTCTGATCATGTCTATTTGGAAGATTTGGACCGAGAGACGGAGGAATCAGAAGCAACCAGCGTAAAATGTCCAGAGTGTAGCAGATTATTTGGTAGCGTACAAAATCGCAGACGTCATCAAAACATGGTGCATAGACAGGATAGAAGAGCTCAAATGGTGGAGATTAAAAAGACCCAACCAGAAACACCTGCTGAAccccaatctgaaaaaaaagcgGAGCAGACGGAAGCTAAAGACAATTTAGAGCAGACGGAAGATGTAAAAAATATGGAGCAGACGCAACCTACAGAAGATTTGGTGCAGACGGAAGCTAAAGAAAATTCGGAGCAGACAGAAGCTAAAGAAAATTCAGAGCAGACGCAACGTAAAGAAGATTCGGAGCAGACAGCTGGAACTACAGAAGAGGAGTCTGGTGCATCTGTTGAAAACATGGGCTCTACGGCGGAAAATGCAGATAATTGTGAAATGGATAGTAGTCCTACTGCCACTTCTGCTGAATTGAATACCCATGAGGAAGCTGCCCTAGAAGattcaAATTCAACTCAAATCGCAAAAGAAACTGACCCAATGGAGGAAACTGACCCATTAGGGGAAACTGACCCATTAGAGGAAACTGACCCATTAAAGGAAACTGACCCATTAGAGGAAACTACTACTAAAGATATGGTTCCTGAAACTTTGGAGAATCCTCCTGAaaatcaaaatgaagaaaatgttgaaaacAAAGAGCAACGTAATGAAGTAACGGTTGAGCCAGAAGAAAACGACCAACAAAAAATCGAATTCGCTGCTGGGCTGAAACTTGTACAAAAAGACTCTACACCAATTGAATTTGAAAGTCTCTCGAAAATTGAACTAAGCTACATTGAGAAATGCAAAGCTATGGTTTCTATGTTCCACAGCCTTCAATGTGCATGCCACAATATGCAACATAAATCTCTACGTCACCTTCTATCACATTTAAGAGAGGTCCGTTTTTGGTTTCCTCTTTTCACTTGCTACAGCTGTATGATTTCGTTCACCGATAGGTCTACATTTACTAGACACCATTGTAGATGTCCTAAAGGTCCGCTAGAAACGTTGATCAAGTTGTCGAATTTAAGGAAACGAAGCGAAATCAAAACTAGACTATATCAAAACTATAAATGCAACAGATGTAAATTTTTATATAGTTTCCATGAAGACTTTTGCAAACACATTAATGAGGATCACGACCCAGGATTGCCACCTATCTATTGTTCTTGCAGAACCGTTTTTAATTCGGTTGATGAATACAAGTCTCACTGTTATACTTCATGCGTTGTGTCGTATTATTGTGATATTTGTTTCATTACTACAGTTTCCATTGAAGAATTTGTAAAGCATTGTCAGGAGGTCCATGACTCCTCTGAAGGATTCCTGTTGCTTCAGGAGGATTGTTATACTCCAAAGAATAGCATCGCTTTACGCCAAAAGGAGGTGAACGAGGAAGCTGTCATTGAAGGCAAAAGGGAACGTAGAAGAAGTGCGAAAGAACCTATTTTGGTGCAAGTGTACGACAGGGAAATCCCCCAGCAAGACCCGAAAGATATACCAACCAAAGTATTGAGGCAGATGATTCAACTCGATTTTCAGCCGACTACTGCTCAAGAATGGAATAGAACCCCGACAAAGTGTCCCGTGTGCAAAAAGGAGTACTCCAGTGTTAATAACATGATAAGGCATTATCGAACTCACATTGagaaaaaggaaattgaagtgcCGCCTCAACTTGAAGAATATGGTGATACAATTGAGGATCTTTACTCTTGCCCAGAGTGTGGCGGAATGTATCCTTCATCCAAATGGAAGAAACACATTGAAGAGAAACATTCGCCTGTAACTTGCACTGAATGTGACAAAGTATTTCAATTTCAATCCGAGTTAGACCAACACAGGAGCGTTCACTTAAATTTGAAAGTGTACAGGGATTCCAAAACGCATTCATATAAAACATCCATAATTAGTCCTGGTGCAGAAACAAACGGCGAAGTTATGGTGATGTGTGAGGTGTGCGATAGCATGTTTAATAGTAAAGAAGACCTGAAACTTCATAAGTTGACTTGCCAGGATGGTACAAGTTTATCGCGAGCAAGTAGTTCCATGGACAATAGCGAAATGTCAGTTGATGAACCTAATAGTGTTCTACAGACAGGCTCCAATGAGAAGCTGCCATGTGATGGTTGCGGCAAATTGTACTCTAGCGCTAAAAGTCTAAAAGAACACGTTATGAATAAACATGGAGTTGAGTTTCTCAAGAAAGGGGAATATCCTAAAAAATGCGATTACTGCGACAAGGTATGCTCTTCAGGGGCAGGCCTAGCTCTACACACGCAAGTTCATGAAAGGATCAATCCAGACAAGAAAGGCGAATTTCCCAAGAAGTGCGAATACTGCGATAAAATATGTAACACAGGAGCAGGTTTGTTCCTACACACTCAAATGCACGAAAGAATGACTTTGGGCGacataaaaaaggaaaaaatgccGATTATCAAAACAGAGTTTGTTAAAGAAAAGAAGAAATTTGAGCCGGAAGATGAAGACGAGGAAGAATCTTATCATACTTGCAAACGATGCTTTAAAGTTTTTGGTACTAAAGGTAAATTGAAGGATCACATGAAGAGCCATGGAATTAATCCGAGCCCTAAAACGTCGGTTAAGAAAAGCAGAAAAATTCTTTGTAATTTGTGCCATGTCGCCCTTGACAGTAACGAAGCTTTGGAGAGGCACAAAGCAGAGGAGCATGAAGATGAGCTAGATGGCATGCCAACTTTGCAAAACGAATTGGAGTTGGACGAAGAGAAAATGCCGCTTGTTTACACCTGCGATGTTTGCGTGGAAACCTTCGATACGAAATTTGAGCTTCAACAGCACAAGGAAACTCACAAGAAAACTATTGCCATGCCAATAATCAAGAATAAAAGTGCATTAATCTATTGTAAATATTGCAAGATTGCTTTCGATTCGGTTAATGAACTGACCAAGCATATGCACGTAGAGCACGGAGAAAGTGCAAAACCCAAATTTACCAAAGATAAATCGGGAAGCGACAAGCCTTTTAAATGCCCAATTTGCGCAAAAGGCTTCGCAACCCACGGAGCGATGACGGCGCATTGCGGTTGGCACAAGCGGACCAACAACACTTTTGACAATTCAGATAATACGCCCCAAGGCAGTAGAACCAGTAAAATAGTCAAAAAAGCAAAAGTGTTGAAGAAAATTGCGCAAGCTGTAGCTAATAAACAAGAACCGATTGAACCATCAGACTTCCAGTGCACTACGTGTTTAATGGAACTACCCAATGACACCGCTTTACAAATTCACATACTCGAGAAGCATCGCGGCTTGGACTCGCTCATGCTGATACCGAGATGCGACACTTGCAATCAAGATTTCGTATCTCAAGAAGAATACGAAACTCATAAGCGATTCCACGACTTTTTAGTCAGGCAAAAGAAGCATGAGAAGCAACTTCAtacacaacaacaacaacaaatccAAACGCCCATTATACAGAGCGTGCAAAGTGTCGCAGAATCGCCTCACAGCAGTCCCAAGAGACACCCCTGCAATTGGTGTAACTCTGTCTTTAGTAGAAGCGACACTCTGAACACGCACATTAAACAGAATCACAAAGAGCATGTTAGAACAGAGTTCGACTGTACTCAGTGTGACAGGGTGTTTGATAAACAGAGCTCGCTGACCATTCATTTGAAAGTGCACGAAAAACAGAAGAATGCTGCTGTGGGTGGTGCAATGGTGGTTGTTGGTGGAGCTGGAAAATTATATTCTTGTTCGATTTGCAGCCAGTTCTTTAGTTACCCCAAAGATCTTAGGATGCACACCATTAACGCCCATCCATTTTAA
Protein Sequence: MASLQASAASGNLQMSGFIKHGRPLPNKTGKVDTELTQISSTSELKATRRAPSWCLYEVTKNDKLPIMVCNDCIIRLDTWYSYKKQCHRNQAKLAEWLSKSTGQNVLDVSIQIKSEPLDMDGPRYGHAPIKTEYPNPSYGDMMDVEFNELPRIVTPQNQSSDHVYLEDLDRETEESEATSVKCPECSRLFGSVQNRRRHQNMVHRQDRRAQMVEIKKTQPETPAEPQSEKKAEQTEAKDNLEQTEDVKNMEQTQPTEDLVQTEAKENSEQTEAKENSEQTQRKEDSEQTAGTTEEESGASVENMGSTAENADNCEMDSSPTATSAELNTHEEAALEDSNSTQIAKETDPMEETDPLGETDPLEETDPLKETDPLEETTTKDMVPETLENPPENQNEENVENKEQRNEVTVEPEENDQQKIEFAAGLKLVQKDSTPIEFESLSKIELSYIEKCKAMVSMFHSLQCACHNMQHKSLRHLLSHLREVRFWFPLFTCYSCMISFTDRSTFTRHHCRCPKGPLETLIKLSNLRKRSEIKTRLYQNYKCNRCKFLYSFHEDFCKHINEDHDPGLPPIYCSCRTVFNSVDEYKSHCYTSCVVSYYCDICFITTVSIEEFVKHCQEVHDSSEGFLLLQEDCYTPKNSIALRQKEVNEEAVIEGKRERRRSAKEPILVQVYDREIPQQDPKDIPTKVLRQMIQLDFQPTTAQEWNRTPTKCPVCKKEYSSVNNMIRHYRTHIEKKEIEVPPQLEEYGDTIEDLYSCPECGGMYPSSKWKKHIEEKHSPVTCTECDKVFQFQSELDQHRSVHLNLKVYRDSKTHSYKTSIISPGAETNGEVMVMCEVCDSMFNSKEDLKLHKLTCQDGTSLSRASSSMDNSEMSVDEPNSVLQTGSNEKLPCDGCGKLYSSAKSLKEHVMNKHGVEFLKKGEYPKKCDYCDKVCSSGAGLALHTQVHERINPDKKGEFPKKCEYCDKICNTGAGLFLHTQMHERMTLGDIKKEKMPIIKTEFVKEKKKFEPEDEDEEESYHTCKRCFKVFGTKGKLKDHMKSHGINPSPKTSVKKSRKILCNLCHVALDSNEALERHKAEEHEDELDGMPTLQNELELDEEKMPLVYTCDVCVETFDTKFELQQHKETHKKTIAMPIIKNKSALIYCKYCKIAFDSVNELTKHMHVEHGESAKPKFTKDKSGSDKPFKCPICAKGFATHGAMTAHCGWHKRTNNTFDNSDNTPQGSRTSKIVKKAKVLKKIAQAVANKQEPIEPSDFQCTTCLMELPNDTALQIHILEKHRGLDSLMLIPRCDTCNQDFVSQEEYETHKRFHDFLVRQKKHEKQLHTQQQQQIQTPIIQSVQSVAESPHSSPKRHPCNWCNSVFSRSDTLNTHIKQNHKEHVRTEFDCTQCDRVFDKQSSLTIHLKVHEKQKNAAVGGAMVVVGGAGKLYSCSICSQFFSYPKDLRMHTINAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -