Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: -
Assembly: GCA_963920685.1
Location: OY987330.1:12550287-12563272[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 37 3.1 1e+03 3.5 0.9 1 23 101 123 101 123 0.96

2 37 0.024 7.8 10.1 0.7 1 23 129 151 129 151 0.94

3 37 0.034 11 9.7 0.6 2 23 159 180 158 180 0.98

4 37 0.022 7.3 10.2 2.0 2 23 187 209 187 209 0.95

5 37 0.001 0.34 14.4 2.2 3 23 215 235 214 235 0.98

6 37 0.028 9 9.9 0.1 2 21 247 266 246 267 0.94

7 37 1.2e-05 0.004 20.5 1.1 2 23 281 302 280 302 0.96

8 37 0.00042 0.14 15.7 4.0 1 23 308 330 308 330 0.98

9 37 0.011 3.7 11.2 4.2 1 23 336 359 336 359 0.92

10 37 0.018 6 10.5 4.2 1 23 365 389 365 389 0.93

11 37 1.4e-05 0.0045 20.3 0.4 1 23 396 418 396 418 0.98

12 37 0.0071 2.3 11.8 2.9 1 23 424 446 424 446 0.98

13 37 0.0086 2.8 11.5 3.0 2 23 522 543 521 543 0.96

14 37 5.1e-05 0.017 18.6 3.9 1 23 549 572 549 572 0.98

15 37 0.0039 1.3 12.6 5.4 1 22 581 602 581 605 0.91

16 37 9.8e-06 0.0032 20.8 1.0 2 23 613 634 612 634 0.96

17 37 0.46 1.5e+02 6.1 0.3 3 21 691 709 690 710 0.93

18 37 0.00057 0.19 15.2 1.6 2 23 743 764 743 764 0.97

19 37 0.43 1.4e+02 6.2 0.2 1 23 784 806 784 806 0.98

20 37 0.34 1.1e+02 6.5 3.8 1 23 811 833 811 833 0.96

21 37 1 3.4e+02 5.0 1.0 2 23 840 862 839 862 0.95

22 37 1.5e-07 4.9e-05 26.5 1.7 2 23 867 888 866 888 0.97

23 37 0.023 7.6 10.2 1.6 3 23 930 951 930 951 0.98

24 37 0.00021 0.067 16.6 1.7 3 23 966 986 964 986 0.96

25 37 0.00016 0.051 17.0 3.9 1 23 992 1014 992 1014 0.98

26 37 1.2e-05 0.004 20.5 0.5 1 23 1020 1042 1020 1042 0.97

27 37 0.00016 0.052 17.0 0.3 1 21 1048 1068 1048 1069 0.95

28 37 0.0033 1.1 12.8 0.1 1 21 1091 1111 1091 1112 0.93

29 37 0.0015 0.48 14.0 5.0 1 23 1342 1364 1342 1364 0.96

30 37 3.8e-06 0.0012 22.1 1.1 1 23 1370 1392 1370 1392 0.98

31 37 0.018 5.7 10.6 0.7 1 16 1398 1413 1398 1415 0.88

32 37 0.021 7 10.3 0.8 1 21 1421 1441 1421 1442 0.95

33 37 1.8 5.8e+02 4.3 0.1 3 21 1497 1515 1496 1516 0.93

34 37 2.8 9.2e+02 3.6 0.4 3 23 1728 1745 1727 1745 0.84

35 37 0.00052 0.17 15.4 2.6 1 23 1751 1773 1751 1773 0.96

36 37 2.4e-06 0.00079 22.7 2.3 1 23 1779 1801 1779 1801 0.98

37 37 0.00037 0.12 15.8 0.8 1 23 1807 1829 1807 1829 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	37	3.1	1e+03	3.5	0.9	1	23	101	123	101	123	0.96
2	37	0.024	7.8	10.1	0.7	1	23	129	151	129	151	0.94
3	37	0.034	11	9.7	0.6	2	23	159	180	158	180	0.98
4	37	0.022	7.3	10.2	2.0	2	23	187	209	187	209	0.95
5	37	0.001	0.34	14.4	2.2	3	23	215	235	214	235	0.98
6	37	0.028	9	9.9	0.1	2	21	247	266	246	267	0.94
7	37	1.2e-05	0.004	20.5	1.1	2	23	281	302	280	302	0.96
8	37	0.00042	0.14	15.7	4.0	1	23	308	330	308	330	0.98
9	37	0.011	3.7	11.2	4.2	1	23	336	359	336	359	0.92
10	37	0.018	6	10.5	4.2	1	23	365	389	365	389	0.93
11	37	1.4e-05	0.0045	20.3	0.4	1	23	396	418	396	418	0.98
12	37	0.0071	2.3	11.8	2.9	1	23	424	446	424	446	0.98
13	37	0.0086	2.8	11.5	3.0	2	23	522	543	521	543	0.96
14	37	5.1e-05	0.017	18.6	3.9	1	23	549	572	549	572	0.98
15	37	0.0039	1.3	12.6	5.4	1	22	581	602	581	605	0.91
16	37	9.8e-06	0.0032	20.8	1.0	2	23	613	634	612	634	0.96
17	37	0.46	1.5e+02	6.1	0.3	3	21	691	709	690	710	0.93
18	37	0.00057	0.19	15.2	1.6	2	23	743	764	743	764	0.97
19	37	0.43	1.4e+02	6.2	0.2	1	23	784	806	784	806	0.98
20	37	0.34	1.1e+02	6.5	3.8	1	23	811	833	811	833	0.96
21	37	1	3.4e+02	5.0	1.0	2	23	840	862	839	862	0.95
22	37	1.5e-07	4.9e-05	26.5	1.7	2	23	867	888	866	888	0.97
23	37	0.023	7.6	10.2	1.6	3	23	930	951	930	951	0.98
24	37	0.00021	0.067	16.6	1.7	3	23	966	986	964	986	0.96
25	37	0.00016	0.051	17.0	3.9	1	23	992	1014	992	1014	0.98
26	37	1.2e-05	0.004	20.5	0.5	1	23	1020	1042	1020	1042	0.97
27	37	0.00016	0.052	17.0	0.3	1	21	1048	1068	1048	1069	0.95
28	37	0.0033	1.1	12.8	0.1	1	21	1091	1111	1091	1112	0.93
29	37	0.0015	0.48	14.0	5.0	1	23	1342	1364	1342	1364	0.96
30	37	3.8e-06	0.0012	22.1	1.1	1	23	1370	1392	1370	1392	0.98
31	37	0.018	5.7	10.6	0.7	1	16	1398	1413	1398	1415	0.88
32	37	0.021	7	10.3	0.8	1	21	1421	1441	1421	1442	0.95
33	37	1.8	5.8e+02	4.3	0.1	3	21	1497	1515	1496	1516	0.93
34	37	2.8	9.2e+02	3.6	0.4	3	23	1728	1745	1727	1745	0.84
35	37	0.00052	0.17	15.4	2.6	1	23	1751	1773	1751	1773	0.96
36	37	2.4e-06	0.00079	22.7	2.3	1	23	1779	1801	1779	1801	0.98
37	37	0.00037	0.12	15.8	0.8	1	23	1807	1829	1807	1829	0.98

Sequence Information

Coding Sequence: ATGGTACCAACCTTGGAAAGCGAAGTGTACAAGTCTAGGTCGATTCGTTTACCAACCGTTAAAAATCACCCTGAAGTTCTAAGGGACGTCGGAAATCTTAAAGAAAACCAGAAGAATTTCCAGCCACAGGATGAACTAAAGAGGGTGAAGGATAACAACTTAGTAAACAATAGTACTTTAGTCACCATAAAAGTGGAAGATTTCTCAAGTGGCATGGCAGCAGAGGAGGATCACAAAGATGTCAAGCCGCTTAATTTCGTTGATGTCGTGTACGATCAGAATATACTAGGTCGGAAACCTTACGCTTGCGCGTTTTGCGAAAATTCTTATTTTACCAAACGCGAGATATATCGCCACCGAGATATCCATAGGATAAACGGATGTTTTCCATGTTCTGTTTGTGCCAaggaatttaaaaattttactgaGTTTAAGTCGCATGCCAGTGAGCACGGTCCTATGAGAGAAGAAATGCAGTGTAAAGTGTGTCTTAAGATTTTGGCCAACAAATTCAGCTGGGCCAATCACATGAAAAGACACAACAATGATTTCAAGGCGGAGTGCGAGTTGTGCAACAAGAAGTTTTATACAACCGCTCAAAAAACTACACACATGAAGGAAAAGCATAATGGAGGATTGCTTTGTCCACAGTGCGGTGAAAGTTTTCAATCGCGCTCCACATTCCACAGGCATGTAAAGCTGCACGATGATCCagattacaaaataaaaaaaatggtcaAGTGTCCATATTGCGATAAAACTATGTCCGTATTGGCCACCTTAAAGGATCACTTGAAAAGGTGTGAGAAGAATCCGGAAAAACCCGAGGTGGAAAAGCAAGAGTGTCCCACGTGCGGGAAAATCTTTAATTCAAAGAACAGCTTAAGACATCACATGATTGGGCACTCGGGGGTTAAGCCTTTTGAGTGTGATGTATGCGAGAAAAGGTTTTTTCATAAATCGACGCTTACTATGCACAAGTTGACTCATACTGGAGAAAAACCGTTTAAGTGTCGATTTTGCGATCAATGTTTTTCACAGTCGAGCACAGTGAAATCTCACGAAGAGAACATGCATTCGGAACAAGATTCTTTCAAGTGCAACTTCTGCGACGATACCTTTCCAAAATTGTCCTCCTGGAAACGCCACATGAAGAAATGCGATCACAACAAGGATAAACAGACCTTTGTTTGTGATACTTGTGGAAAAGTGTTTAATTTTATAACCAATTTGAGAACTCACATCCAAGTACACAAAGGAGAAAAATCCTTTGAATGTGACGTGTGTCACAAGAAATTTCTACGACCTTTTACTCTGAGAATCCATAAACTTACTCATACTGGGGAACGACCGTTTAAGTGCAAAGTCCAGATAAAACTAGAGGATTTTTCCAGTGAACTGACAGAAGAAGACTTTGGCGAAGATATCAAACGCTTTAATGTTTATATCGCGTCTAAACCAGATCCACTCAGTGATCAAGCACCGTGGACTAATCATGTGAATGTACATAAAAAAGAATTTAATGATGAGCGTGATTCGTCTTCTCATAAGAAAATCAAACTTGTATGTGGTATATGCCAAAAGCGATTTTCGCGTAGTAATGACCTTAAATGTCACAAATTGACCCACTCAGACGAAAAACTGTTTAAATGCAAGCTGTGTGACAAATGCTTCACTCAGCGAGCGGGAGTGAGGAAGCACCAAAATCGTGTACATTCAAAAGCAGGCCCCAAACATTTCTTCAAGTGCGACTTCTGCGACAAGCTGTTTTCATCACTGCACAACATGAAGCGCCACATGGGGAGATGTGATCACAACCACGACAAGTTAAATTTAGTTTGTGATACTTGCGGGAAGATTTTTCACACTAAGGATAATTTAAATACTCACATTCTGATGCACAAAGGGAAGAAGCCTTTGGAATGCAACGTATGTCAGAAAAGGAAATACAGTAGATTAAGAATAACCCGTAGCACAAGAAAGCAGTTTGACCACCATGAACACAACGTAAATCAAAAGATCCATTCAATGACTATAGTGCGAACAAGAAAAAGACAAAGCTTAGTTTTTTGTTCCAAGTGCGATGTAGGTTTTGGTTCTAAGAAACTGTTAAGCATCCACGAAAAGAAATGTGAGTACCTGCCGTTTCCTCCAAGCGATGATATAGAGCTATCAACGAAGCCCGGAGAAAACGACAAAGAGCGCAGAGCCTACAGAGTCCCGCGTCAATGTAAGAAATGCCCACAAGTGTTCATGACCCTTAAAGAACTGAAAAATCACCAGAAAGAGCACAGTTCTCTGCAGCCCATTGAAGAACACTCATATACACATGACGAAAGCCTAGACATCTACATCTGCCAAACGTGCTCAGCCGAATTTCAAGATTCCTTTGAAGCCGAGGAACATGTGAAGACCCACGAAGAACAAAGCTACGCGTGCCTGAAGTGTTCCAAGAAGTTCAAGTCGCTACGCGCTTTGTTCTGTCACATGGAAAATCACTTGGAAGACGATAAGATCCCGTGTCCTATGTGTTCCTTTAAGACAATGAAAAAGAAGAAGCTTCTCAATCATTTAAGTTCTAGTCATCTTAATACCAGCGTGTGTTCGAAGTGCGGTAAGGTCTTCAACAGCCGCTCGAATCTCCGAAAGCATATGCTTCGCCACGACGAAACCAAGAAGCATGCTTGCATAGTCTGTACCAACGTGTACTTCGGTGAGAAAGCGTTGTTGCGACACCAAACATGCATGCACAAGGTAGATATCATAAACGACCCTTCGCTCTTATGGTGTCACATCTGTAGGGTGGAATTCAAAACTGCCAACCTCCTAAAATATCACGTTAAAAAAGCCCATACCAAAAACCTACTAAACAAACCAGTAGAAAAGAAATGCTTGTGTGATATCTGTGGACAAGGCTTCAAGGATACAGATAATCTCAAGAAGCATAAAATATCACATACAGAGGACAGGCCGTTTATGTGCTTCCAGTGTGGCAAGGCCTTTAAACATAAGTACGTCTTGACCTACCACCAAAGAATTCACACTGGGGAACGTCCCTACAACTGCGGGTATTGTGGAAAGAGCTTTAGGCAGTGGACACCCTACAAGGTCCACCTAAGAGGCCATACGGGTGAGAAGCCCTATGTTTGTAAGATATGCAATAAGGGCTTTACTACGAATCAAGGGTTGAAGCTTCACGTTAAGAATTGTTTTGATAGCAGGGAGAATATTGGAGTTTTTGAGTATTACCTAACTCAGGAAATAAAACCGCACGTGTGCAAAATCTGCTCCCAGGCATTCAGCACTCCGGAGGCCGTTGAAAGGCACTGGAATAAATTGAGTATTAAAACAATGTGCTTCTGCAAAACTTGTGGACACTTCTACGGGCCTGACTTTCAGTGCGATGATCCGCCAGAAAGGAAAAAGCTCAACTGCTTTCTATGCAAGATGGAACTCAACTATTGTAATCTTAAAGATCATATTTGTTTTCACTTGGGAAGAGAGCCTGATTCACCCATTAATGCGTCAATAGAAAGATGCAAGCGTAGAGCCAAAGAACGAATGGGTATTTACACGAGGATCAGGAATAAATACATTGAAGCGAGAAAACACTACATTAAGGAAGTGAGAAATATAAAGGAAATGCATTGCAAAAGTAAAGAAGGGGGTGAAGATAGATTTATGGAACCTGAAGTTTTACTCTGCGAAGCAGAAGACAAGGAAACAGACCTCTGCATGTTTTGCTTCCAAGAAGTCCCCTTGCAGCTGTTATCCACGCACGAAAACCAGCATAGATTGAAAGAACAAATAGTAACGATACAGAAAAAAAGAAGAGTTATGACGGAAGTCGAGAGGGAGGAGCAGATCATCTGCTATATCTGCGGACAGCTGGTGAAGAGAAGAAGCTTCAGAAGTCATAAGCAGTTCCACACTAGACTGAAAAAGTCAGTAATCTGCGAAATCTGCGGTTTTGCAAGTAAAAATATTACACAGCACCGGATTAGTCACAGCGATCAACGGAAATACAGCTGTGATAAATGTAAAATGTGCTTCAAGACAGCTCACGCGCTTCAGAAACACAATCTAGTTCATACAGATGTCGGGCTACACAGATGCCCTACGTGTGAAAAAGCATTCAAAGCTGCATACAATCTCACAGTTCATATGAGAAGTCATATGGATAAGAAACCTTTTGAATGTGACCTTTGTGATAAAACCTTTACTACTAAGCAgggTTTCATTAAATTAGAAAAGAGCGATCACGAGTGCGTGACTTGCCTCCAATCATTTGACACATCGGAGGAACTGGCTCATCATCAGAgatacctaaaaataaaaaccaaatggTATTGTATCACTTGTGACAATTTCGTCGATCATCGGAATCCCTGTGATCATCCATCCACAGAAAAAAGATATGTGTGCTCCGTATGTAAATCCAAGCTTGAGTACGGTAACGTAAAAGATCACTTTTGCTTTCACGGACATTGTCCCGCTTGCCTGGAAACGTTTCCAACCCTAGAAGAGTTACACGGACATATAAAGGTGAAGACACTGTGCATGTGCAACACCTGTGGAAATTTTTATGGGCATAGTCAATGCATACATCCTCCCACAGCAAAAGCCTTCTTTTGCTCCTATTGCTCTCTAATTCTTCATTACACTGAGATACGAAAACACTTGTGCTTTCACGGAGAACGATTTAGAGTCATCGGGAGAGAAGAATCTTCCGAAGATGAAGCAACAGAAAGCAGGCGTCCAAAACCACAAACACTCGTCGGTATATATTGTAGGGTAAAGCAACAGTACGTTCGAGCTAAAAGACGATACCTCAAAGAGGTGAAGAAAATAAGAGCTGGGTTCTATGACACTCACAGATACCCTGAGGACCAGGAAGATAGTGACTCGGATTCAGATGAAGGCGATGCTTTAAAAGTGGAAGTTAGTGATGAGGAAACCGCACTTTGTGTGTTTTGCTTCGAAGGAGTCTCTTTACCGATTTTAGATCAACATGAATCAAAATGCATTCTTACGCGAAACAGACATCGAAGCGAAGACCAGAAGGCACCTGGAGAATCCTTCCAAGAAAGGAAGATTCTTTGTTACGTCTGTGGAGGTTTATATCGCTCGTGCAAGTTTAGATTCCATATGCTTACGCATAAAAAGATGGGGTCGGTTCTTTGCGAGATTTGTGGGATTCCCACGAAAAACCTGAAAAGCCATATGTCCAAGCATAGCGATAAAAGGAATTTTAGCTGTGACAAGTGTGGGATGTGTTTTAAAACTAGTAAAACGCTGCTGGTTCATAATTTAGTTCATGTCAAGGTTGGATCTCATAAATGTCCTACATGtgaaaaactgtttaaaaatgCTTATAATCTGAGGGTGCATATTAGGACTCATATGGATAAAAAACCTTTTGAATGTGCAATTTGTGAGAAGTCGTTTACTACCAAGCAGTGGCGAGATAATCATATCAAAACGCACAAATAA
Protein Sequence: MVPTLESEVYKSRSIRLPTVKNHPEVLRDVGNLKENQKNFQPQDELKRVKDNNLVNNSTLVTIKVEDFSSGMAAEEDHKDVKPLNFVDVVYDQNILGRKPYACAFCENSYFTKREIYRHRDIHRINGCFPCSVCAKEFKNFTEFKSHASEHGPMREEMQCKVCLKILANKFSWANHMKRHNNDFKAECELCNKKFYTTAQKTTHMKEKHNGGLLCPQCGESFQSRSTFHRHVKLHDDPDYKIKKMVKCPYCDKTMSVLATLKDHLKRCEKNPEKPEVEKQECPTCGKIFNSKNSLRHHMIGHSGVKPFECDVCEKRFFHKSTLTMHKLTHTGEKPFKCRFCDQCFSQSSTVKSHEENMHSEQDSFKCNFCDDTFPKLSSWKRHMKKCDHNKDKQTFVCDTCGKVFNFITNLRTHIQVHKGEKSFECDVCHKKFLRPFTLRIHKLTHTGERPFKCKVQIKLEDFSSELTEEDFGEDIKRFNVYIASKPDPLSDQAPWTNHVNVHKKEFNDERDSSSHKKIKLVCGICQKRFSRSNDLKCHKLTHSDEKLFKCKLCDKCFTQRAGVRKHQNRVHSKAGPKHFFKCDFCDKLFSSLHNMKRHMGRCDHNHDKLNLVCDTCGKIFHTKDNLNTHILMHKGKKPLECNVCQKRKYSRLRITRSTRKQFDHHEHNVNQKIHSMTIVRTRKRQSLVFCSKCDVGFGSKKLLSIHEKKCEYLPFPPSDDIELSTKPGENDKERRAYRVPRQCKKCPQVFMTLKELKNHQKEHSSLQPIEEHSYTHDESLDIYICQTCSAEFQDSFEAEEHVKTHEEQSYACLKCSKKFKSLRALFCHMENHLEDDKIPCPMCSFKTMKKKKLLNHLSSSHLNTSVCSKCGKVFNSRSNLRKHMLRHDETKKHACIVCTNVYFGEKALLRHQTCMHKVDIINDPSLLWCHICRVEFKTANLLKYHVKKAHTKNLLNKPVEKKCLCDICGQGFKDTDNLKKHKISHTEDRPFMCFQCGKAFKHKYVLTYHQRIHTGERPYNCGYCGKSFRQWTPYKVHLRGHTGEKPYVCKICNKGFTTNQGLKLHVKNCFDSRENIGVFEYYLTQEIKPHVCKICSQAFSTPEAVERHWNKLSIKTMCFCKTCGHFYGPDFQCDDPPERKKLNCFLCKMELNYCNLKDHICFHLGREPDSPINASIERCKRRAKERMGIYTRIRNKYIEARKHYIKEVRNIKEMHCKSKEGGEDRFMEPEVLLCEAEDKETDLCMFCFQEVPLQLLSTHENQHRLKEQIVTIQKKRRVMTEVEREEQIICYICGQLVKRRSFRSHKQFHTRLKKSVICEICGFASKNITQHRISHSDQRKYSCDKCKMCFKTAHALQKHNLVHTDVGLHRCPTCEKAFKAAYNLTVHMRSHMDKKPFECDLCDKTFTTKQGFIKLEKSDHECVTCLQSFDTSEELAHHQRYLKIKTKWYCITCDNFVDHRNPCDHPSTEKRYVCSVCKSKLEYGNVKDHFCFHGHCPACLETFPTLEELHGHIKVKTLCMCNTCGNFYGHSQCIHPPTAKAFFCSYCSLILHYTEIRKHLCFHGERFRVIGREESSEDEATESRRPKPQTLVGIYCRVKQQYVRAKRRYLKEVKKIRAGFYDTHRYPEDQEDSDSDSDEGDALKVEVSDEETALCVFCFEGVSLPILDQHESKCILTRNRHRSEDQKAPGESFQERKILCYVCGGLYRSCKFRFHMLTHKKMGSVLCEICGIPTKNLKSHMSKHSDKRNFSCDKCGMCFKTSKTLLVHNLVHVKVGSHKCPTCEKLFKNAYNLRVHIRTHMDKKPFECAICEKSFTTKQWRDNHIKTHK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -