Pter066035.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polydrusus tereticollis
Gene Symbol
-
Assembly
GCA_963920685.1
Location
OY987330.1:12760191-12769844[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 3.9e-05 0.013 18.9 1.3 2 23 53 74 52 74 0.97
2 38 6.8e-06 0.0022 21.3 0.5 1 23 80 103 80 103 0.96
3 38 2.2e-05 0.0072 19.7 1.8 1 23 109 131 109 131 0.98
4 38 0.001 0.33 14.5 1.0 3 23 139 160 137 160 0.94
5 38 6.8e-05 0.022 18.2 1.5 1 23 165 187 165 187 0.98
6 38 0.86 2.8e+02 5.3 5.3 2 23 198 217 197 217 0.90
7 38 8.4e-06 0.0027 21.0 0.3 1 23 224 246 224 246 0.98
8 38 2.3e-05 0.0075 19.6 2.4 1 23 252 274 252 274 0.99
9 38 2.7e-06 0.00089 22.6 0.0 1 23 280 302 280 302 0.98
10 38 0.00019 0.061 16.8 0.9 3 23 341 362 340 362 0.96
11 38 0.017 5.6 10.6 7.8 1 23 368 391 368 391 0.98
12 38 3.5e-05 0.012 19.1 1.2 2 23 397 418 396 418 0.97
13 38 0.00083 0.27 14.7 2.0 1 23 425 448 425 448 0.95
14 38 0.0065 2.1 11.9 1.3 1 23 454 477 454 477 0.95
15 38 9e-05 0.029 17.8 4.6 1 23 484 506 484 506 0.99
16 38 0.18 60 7.4 4.1 3 23 514 535 512 535 0.95
17 38 0.02 6.4 10.4 0.1 2 20 541 559 540 560 0.93
18 38 0.19 61 7.3 1.5 2 23 573 592 573 592 0.90
19 38 4.1e-05 0.013 18.9 0.4 1 23 599 621 599 621 0.97
20 38 0.0008 0.26 14.8 5.0 1 23 627 649 627 649 0.98
21 38 1.4e-05 0.0047 20.3 0.7 3 23 657 677 655 677 0.97
22 38 0.82 2.7e+02 5.3 3.1 1 19 683 701 683 706 0.91
23 38 0.0015 0.49 13.9 0.3 1 23 808 830 808 830 0.97
24 38 0.011 3.5 11.2 0.3 2 23 857 879 857 879 0.96
25 38 0.017 5.5 10.6 0.4 1 23 925 947 925 947 0.98
26 38 0.0018 0.58 13.7 1.6 1 23 954 976 954 976 0.98
27 38 0.052 17 9.1 1.4 3 23 984 1005 983 1005 0.94
28 38 0.0057 1.9 12.1 0.0 1 23 1011 1033 1011 1033 0.96
29 38 9.5e-06 0.0031 20.9 2.0 2 23 1052 1073 1051 1073 0.97
30 38 9.9e-06 0.0032 20.8 2.5 1 23 1079 1101 1079 1101 0.99
31 38 0.00056 0.18 15.3 0.8 1 23 1107 1129 1107 1129 0.98
32 38 0.0053 1.7 12.2 0.7 2 23 1136 1158 1135 1158 0.94
33 38 5.7e-05 0.019 18.4 0.5 2 23 1163 1185 1162 1185 0.94
34 38 0.82 2.7e+02 5.3 3.2 2 23 1195 1214 1194 1214 0.93
35 38 5.3e-05 0.017 18.5 0.5 3 23 1226 1246 1225 1246 0.98
36 38 2.1e-07 6.9e-05 26.0 1.4 1 23 1252 1274 1252 1274 0.99
37 38 8.6e-05 0.028 17.8 3.0 1 23 1280 1302 1280 1302 0.98
38 38 0.0017 0.56 13.7 0.5 3 23 1310 1331 1308 1331 0.96

Sequence Information

Coding Sequence
ATGATTAAGGGTTTTTGTTTTAGGGCGCTATTACTAATTAAAGCAGAGCATACAAATAAGTATACAAAGAGAAGTAACTTCAAAGAAAGCGTACTtaaacgaaaaatattaaaacaaaataagtacaAATCGAAATTGAATCTCGATCCACCCATACAATGTCCGCATTGTCCAAGGACGTTCAATCAAAATTACAAGCTGAAAGGGCATCTTAGCGTCCACCAAACGGAAAAACCGTTTTCTTGCGAGGTCTGTAACACaggttttaagaaaaattcagcACTCAGGCGACATATTCGTGAAATCCACGAACAAAATCAGACATATTCGTGTTTGGAATGCGGAAAAACATTTAACAGTAAAACAAACTACGTCATTCACACCAAAAGGCATATGGAGGAATATGTCGTCCATTGCGAACTGTGCAACGAGGGATTTGTCACCAAAACCGAGTACAGAAGACATATGGACGTGAAACACATACGAAAAGAATTTGTTTGTGATACATGCGGAAAAAGCATTTCCAGCGAGAGACATTTGAAGGAACATAGAAGGATACATGAGGAAAAATATGCGGATAGGTATTTTCAAGAATGTAAAGTTTGTAATAAGAAATTTAGGCATCTCAAGAAGCACTACAGGGAATTTCACGAGGGTGACGGAAACAACTACGTTTGCGACATCTGCGGAAAATCTTTTCGGGGAGAAAACAGCTTCAAAGTTCACCTGAAAATTCACAGAGGCGAGAGACCTTACCAGTGCGAAGTCTGTCACAAAGAATTCTACTCTAAACAGTATCTAACGGTCCATTGGAGAGTGCACACTGGCGAGAAGCCTTACGAGTGCGACATTTGTGGCAAAGGCTTTGCCCAGAAGCCTCCTTTGAAAGTGCACATGAGGTTACACTCGGGGGAGAGGCCCTATGAGTGCGATTTTTGTGGAGAAAAgGAAGTCATAAAAATAGAGTTAAGTTACGATGATGCCAGTGAAGACTCTGTGGATGCGCGCAAAGTCGTTTTGTGCTCATTTTGTGGTAAGGGATTTGACCGGAGCCATGGGTTGACTAAGCACATCGCATCTGTACACTCTGACGAACGCCCGTACCAATGTCAGTTTTGTGGCAAATGCTTTAAATTGAAAAGTTACCTAGGTTGTCATATGAAAACCACCCACCTCTCTGTTGGACTGAAATGTGATATTTGTGATAAAACCTATAAAAATGAAAGGTCGCTGAAGTTGCACTTGAAGCTGCACGATCCAAACAAGGAAAAATATTCGTGTTCAATATGTAAACGTGAATTTACCAAAAGTCACACTGTGACCAGACACATTGCACAGGTTCACTTTAACGAGCGACCTTATCACTGTGATATTTGCGACCAGTGGTTTAAGTCCAACGGTAGTCTTAATCAGCACAGACAGGGCCAGCATCAGGAAAATCCTACTAGGTTTAAATGCAAGTTTTGCCAAGAAACTTTCAAATATAAGTCGAGTTTAACTTTGCATGAAAGAAAACATATGAATCAATACATCAAATGCTGTCAGATGTGTGATAAACAGTTTTATTTAGATCGGGACTACAGAAATCATATGCAAATGAAGCATGAGGCCAGGACTGTACCCTGTACAATTTGCGACAAGAAGTTTCCTACTTCAAAACGCATGCTTCAGCATCAAGTCTGTCACAAGGAGAAAAATCAACAGGTGGTGTTCGAGGAATGCCCTTTCTGCAATAAAAGATACAAGAATTTAAAAGTGCATATCAGGAATTTCCATGAAACTGACGGCAAGAATTTTATATGCGATCTGTGCGGCAAATACTTTAGAGAAAAAAGTGGTCTAAAGCTGCATCTTATGATTCACCAAGGGATAAGACCGCATCAGTGCAAGGAATGTGGCAAAAACTTCCTAACCAATCAACATTTGATATTGCATACTCGAACGCATACCGGCGAAACCCCATTTGGTTGTAAACTCTGCGGCAAAATGTTTACCAGAAAGCCAGGGTTGAAGTTGCACATGAAGTGGCATgctggagaaaaaatatttaaatgtgatATTTGCGCCATGGAATTCTATGCGAATAAATATTTGAAGAGGCACTGCAAGGCTAAGCATAACACCGATGTTATTCTTAAaGACTGGCAGCTTGTAACCCTAATCGATCCTAGTGAAATAGAAATAAAAACCGAACCCATTACAGAATTGGCAGAAGGTGAAACCTTCTTAGATGTACCTCCATTAGTGCCTCTTTTCAAAAATCCTTTAAATTCCAGCCATTCCGATATGCCGTCTTTGGTTCCGATTTCTAGTTCTGCATCGAGAATAAATAGCAGCTTTATGTACCTAAATGTACCACCGTTGGTTCCGATTTCTAGTGCTGAATCTAAAACAGAACAGGGGTCTGAAGAAAGACGATTTTTTTCGTGCCTTATCTGCTACAAGGTATTCGTCACCAAAGCAAGTATCTTTGAGCATCTACGTGCCCACAAAAAAAACTTAAGCACTTGTCTTACCAGCGATGATATTTTTACGTCTGAAAAGGATAGTTTTACGAATTATGAAGCGTACTGCAAAGTCTGTAAACAAGGCTTTGGCCAGGAAGACGATTACAACAATCACTTGCAAGTTAGACATGCTACCCAAATCAGGATTTGTAATACTTGTAAATCAACCTATGAGAGTGAAGATAGTGTGGATAAAGACTGCAGGAACTGTTTGTTTCGTCAAGCTAACTACCGCGAACACGTAAAACCTATTAGTGCAGAAACTTACAGGTGTAATAAATGTGGGGATAGTTATATTTCTGAAACAGTTTTAAATGAGCATCAAAAACTGCATGCTTCTGATAACAATAAGTATTGTTGTGATATCTGTGGAAAAGCAATGTCCACCAAACAAAGTTTGGGTATACATAGAAGGAGACATACGAAACAGTATATTGCATTTTGTGAAAGTTGTGATAGAGGTTTTGTACGTCACTTTGATTATCGTGCCCATTTGCTGGAGAAACATGGCAATCTTCTGTCGTTTTCTTGTGATATCTGTGGAATATCTCTCGCTTCTAAAAAGCAAATGATTGTGCATGTTCAAGCCCACGAAAGGATAGAGAACACGCAAGCTGGGAAAGAAGAGCCTAATGCTACAAAAAAGCAGTGTCCTCTGTGTCACAAGACCTTTAAACGTACTGGAGAACTAAATCGCCACCTAATAATTCACTCACCTGATAGACCATTCAAATGTACTGTCTGTAGCAAGGCCTTCAAAGTAAAAACGACTCTTCAGAAACATCAGAAAATTCATTCAGAAAGGGTAACTTTTCAGTGTGACAGTTGCCAGAAGGTGTTCCTCTCTCAACAAAACCTAACGATACATATTCTGAGGCACTCCAATAGTTATGTTATAAAGTGCGAGCAGTGCGGACAAGGGTTCTTTAATAAAGTGCATTACAACCTTCACGTGGAATCGGTTCATAAGAACCAAAGCGTTTGCGAAATCTGCGGGAAGAAATTATCCAACAAATACAACCTTAAATATCATCTCATGGAGACTCATGGGCAAGGACAGCCAGCCGAAGCAAAGAAATGTACCATTTGTCAGAAGGAGTTCAGGTTCTTAAGAATTCACATGAGGAGATTCCACTCAGCCTCCAAGAAAAAAACCAAGCTGAGTTTATGTGATCTTTGCGGCAAGGAGTTTAGAACTAAGGAAGGTCTCAATATGCACTTGATGAAGCATCAAGGGATCAAACCTTATCAGTGCGAATATTGCGAGAAGTCTTTTACTATCAAAGATAATTTGAAATTACATATTAGGACACATACGGGGGAAAAGCCACATCAATGTCCGGAGTGTTTAAAGTGTTTTTCGCAAATTACTCCGTTGAAGATTCATATGAGAATGCACTCGGGGGAGAAACCTTATGGTTGTGAGCTGTGTGGTTCCAAATTTGTATCTAAAACATTACTGAATATCCACatgaaaaataaacataatattgttTAA
Protein Sequence
MIKGFCFRALLLIKAEHTNKYTKRSNFKESVLKRKILKQNKYKSKLNLDPPIQCPHCPRTFNQNYKLKGHLSVHQTEKPFSCEVCNTGFKKNSALRRHIREIHEQNQTYSCLECGKTFNSKTNYVIHTKRHMEEYVVHCELCNEGFVTKTEYRRHMDVKHIRKEFVCDTCGKSISSERHLKEHRRIHEEKYADRYFQECKVCNKKFRHLKKHYREFHEGDGNNYVCDICGKSFRGENSFKVHLKIHRGERPYQCEVCHKEFYSKQYLTVHWRVHTGEKPYECDICGKGFAQKPPLKVHMRLHSGERPYECDFCGEKEVIKIELSYDDASEDSVDARKVVLCSFCGKGFDRSHGLTKHIASVHSDERPYQCQFCGKCFKLKSYLGCHMKTTHLSVGLKCDICDKTYKNERSLKLHLKLHDPNKEKYSCSICKREFTKSHTVTRHIAQVHFNERPYHCDICDQWFKSNGSLNQHRQGQHQENPTRFKCKFCQETFKYKSSLTLHERKHMNQYIKCCQMCDKQFYLDRDYRNHMQMKHEARTVPCTICDKKFPTSKRMLQHQVCHKEKNQQVVFEECPFCNKRYKNLKVHIRNFHETDGKNFICDLCGKYFREKSGLKLHLMIHQGIRPHQCKECGKNFLTNQHLILHTRTHTGETPFGCKLCGKMFTRKPGLKLHMKWHAGEKIFKCDICAMEFYANKYLKRHCKAKHNTDVILKDWQLVTLIDPSEIEIKTEPITELAEGETFLDVPPLVPLFKNPLNSSHSDMPSLVPISSSASRINSSFMYLNVPPLVPISSAESKTEQGSEERRFFSCLICYKVFVTKASIFEHLRAHKKNLSTCLTSDDIFTSEKDSFTNYEAYCKVCKQGFGQEDDYNNHLQVRHATQIRICNTCKSTYESEDSVDKDCRNCLFRQANYREHVKPISAETYRCNKCGDSYISETVLNEHQKLHASDNNKYCCDICGKAMSTKQSLGIHRRRHTKQYIAFCESCDRGFVRHFDYRAHLLEKHGNLLSFSCDICGISLASKKQMIVHVQAHERIENTQAGKEEPNATKKQCPLCHKTFKRTGELNRHLIIHSPDRPFKCTVCSKAFKVKTTLQKHQKIHSERVTFQCDSCQKVFLSQQNLTIHILRHSNSYVIKCEQCGQGFFNKVHYNLHVESVHKNQSVCEICGKKLSNKYNLKYHLMETHGQGQPAEAKKCTICQKEFRFLRIHMRRFHSASKKKTKLSLCDLCGKEFRTKEGLNMHLMKHQGIKPYQCEYCEKSFTIKDNLKLHIRTHTGEKPHQCPECLKCFSQITPLKIHMRMHSGEKPYGCELCGSKFVSKTLLNIHMKNKHNIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-