Pter026515.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987327.1:77384317-77386097[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-06 0.00016 24.3 0.0 5 40 1 36 1 38 0.95
Sequence Information
- Coding Sequence
- ATGCAGCGCGCTATTGATGCTGTTAATAGCGGAGAAGCAGGTTGGCTAAAAGCATCCAAACTGTTTGGTGTTCCGCAAGCCACGCTTCCGagaagagtacaaaataaaaacttaattgctAGTGGTACCAAGAAATGGTTAGGTCGCTTTCAAACAACTTTTAACGCTGATTTGGAAAGGAAGATTGTGGACCATATTAAACTTCTCGAGTCTCGACTATTTGGATTGACTTCGACCGACTTGCGTAAATTAGCATATGACATGGCCGACAAAAATGGTATAGAGCACCGCTTTAACAAAACTCTGAAGATGGCTGGCTGGGACTGGTTGGCTGGTTTTCGCAAAAGGAACCCGGATATTGCCTTGAGAAAACCAGAGCCCACTTCCAAAGCGCGCGCCATGGCATTTAATAAGCCTCAAGTATCGAAATTTTTCGAAACCTACcaagaaattttggaaaaacatAACATTTCACCGACAAAAATTTTCAATGTGGACGAAAGCGCTCTCTCCACTGTACAAAAACCACCGAAAGTTTTTGCTCAAACTGGAAAAAAACAGGTTGGAGCCCTAACTAGTGCCGAGCGCGGAATTCATGTCACTATGGAAAAGATGGAAGGAGGAATTAATAGATGGGGACCGTTAGGCACCCTAGGTTTATTCCAAGAGAATGGATGGATGAACTGTGAATTGTTTCTTAGATGGCTGCAGCACTTTAAAAAGTTTGCCAATCCTACGATATCTGATAAAGTTCTCTTGATTGTTGACGGGCATATAAGTCATAAAAGTTATGAGGTTCTAACGTTTGCCAAAAACAACGGAATTATTATATTGAGTTTGCCAGCACACTGCACTCATAGGATGCAGCCACTGGATGTTACATTTTATGGACCTATGAAGACCTATTACAACCAGGAAATTTCTTTATGGCTTAAGGCACATCCCGATAGAGTTTTGTCACAATATCAGATAGCCAGATTGTTTGCACAGGCTTATTCCAAAGCTGCGCAAACAGCAATCGCCGAAAGTGGGTTCCTAAAAACTGGAATCTGGCCAGTTAATCCACACATTTTCCCAGACTATTTATTTTTACCAGCTGAGACTACAAATATAAGACAAGAAGAGGTCAACGATGCCAATAACGGGCAATCTGACAATGCACCTTCCAATAATAATAACGATGGTGATGCTGAAAACAAAGTTGAGTATTCTGGATGTCCTGAAAAGCAAACACCGATGCAAACATTTAGCAAATCACCACAGGAAAAACCGAATATTATGCGAGAAGGAGAGGCAGAAGAGATTTCTCCGATTCCGCAAGCAATTTCGGCTACTAAGAGAAAACGCAAAGCTACCGTATCCCAAGAGCTAACAGGTACTCCAAACATGGAAGATTTAAAAGCACAGAATTTAGCAAAAAATGAGAAAGCCAGAGACAAGGAATTACGGCGCAGAGCAAGAGAAACTAAGAAGAGGTTAGACCTGCACGTGCATGACTACGTTCCCCCGAAAGAAAACAAcgaaatggaaaaaaaaaatgaattacgcCGCACAGCAAGACAAACTAAGAAAACATTTATACAGTCAGGTGAAGGCGATTCTAATACTGACGAAGATCCATTTAAAGATGACGGCGAAGAGGATACTGCCTCCCTTTATTGCAATTCGCTGTACTCTTAA
- Protein Sequence
- MQRAIDAVNSGEAGWLKASKLFGVPQATLPRRVQNKNLIASGTKKWLGRFQTTFNADLERKIVDHIKLLESRLFGLTSTDLRKLAYDMADKNGIEHRFNKTLKMAGWDWLAGFRKRNPDIALRKPEPTSKARAMAFNKPQVSKFFETYQEILEKHNISPTKIFNVDESALSTVQKPPKVFAQTGKKQVGALTSAERGIHVTMEKMEGGINRWGPLGTLGLFQENGWMNCELFLRWLQHFKKFANPTISDKVLLIVDGHISHKSYEVLTFAKNNGIIILSLPAHCTHRMQPLDVTFYGPMKTYYNQEISLWLKAHPDRVLSQYQIARLFAQAYSKAAQTAIAESGFLKTGIWPVNPHIFPDYLFLPAETTNIRQEEVNDANNGQSDNAPSNNNNDGDAENKVEYSGCPEKQTPMQTFSKSPQEKPNIMREGEAEEISPIPQAISATKRKRKATVSQELTGTPNMEDLKAQNLAKNEKARDKELRRRARETKKRLDLHVHDYVPPKENNEMEKKNELRRTARQTKKTFIQSGEGDSNTDEDPFKDDGEEDTASLYCNSLYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242653;
- 90% Identity
- iTF_01242660; iTF_01242661; iTF_01242630; iTF_01242662; iTF_01242631; iTF_01242610; iTF_01242617; iTF_01242653; iTF_01242651; iTF_01242652; iTF_01242649; iTF_01242654; iTF_01242655; iTF_01242656;
- 80% Identity
- -