Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: -
Assembly: GCA_963920685.1
Location: OY987331.1:77205525-77208071[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-06 0.00013 24.6 0.1 2 38 16 52 15 58 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-06	0.00013	24.6	0.1	2	38	16	52	15	58	0.91

Sequence Information

Coding Sequence: ATGCCCAAAACTCAAGAAGGCAGTAAATACACAAAAAATTATTCCGAAGCAGATCTGCAGATAGCTTTGAAAGCAATTGATAATGGTGTAGCTGTTAGAGAAGCGGCTAAAGCATACAAGATACCACGTGCAACTCTTCAGTTTAGAAGAAGTGAAACATTTACTAAAACAAGTTTAGGACCCTGCCCATATCTTTCATTTGAAGAGGAGAATTTATTGGTTAATTGGTTAGTCGAAAGTTCAAACAGAGGATTCCCTAAAAGAAAGGAAGATCTTCAATTATCTGTGAAAtcatttttggataggaatcctAGGGATACTCCATTTAAGGATAATTATCCAAGTGATTGCTGgtacaaagcatttttaaaacgCCACCCAGACCTATCTGTTCGCACTCCTGAAGCTGTGACAGCTTCCAGCTCAAAAGTATCAGAAAAAGATATTAGAAAATGGTTCACAGATATTAACGCATATCTGGTTTCAAAAGAATATGATAACATTTTTCAGAATCCAGAGCGAAtacttaatgcagatgagactggGTTTAACTTGTGCCCGAAAAATTCTTCGGTATTGGCTCCTAGAGGTTCAAGAAATGTGTACGAAATTGAACATGCACCCTCAAAACAAACAATGACCGTTTTGTTCACTTTTTCAGCGGCTGGGGATGTGACACCTCCAATGATTATCTTCCCTGGAAAGCGACTGAAGAATGAAATTTATGAATCTGTTCCAGAGACTTGGGGAATTGGACAATCCGACACAGGTTGGATGAAAGCCGACATATTCACTGATTATATAGTTAAGGTCCTTCATCCTTATTTGGAAGCGAATAAAATACAGTTTCCGGTAATATTATTCATTGATGGTCACGCATCCCATTTAACCTATGATGTAAGTGAGTTGTGTAAGAAATTAGACATTATTTTGATATGTCTTTACCCAAATTCTACAAGGATTTTACAGCCTGCTGATGTAGCAGCATTCAAGCCGATTAAAACGGGCTGGAAAAAAGCTGTCCTAAAATGGAGGAGAGAAAACCTTAcccaaactttaaaaaaagaaaattttgcaCCTATTTTAAAAACAGTCATCGATGACTACGCTAAGTCACAAACTATTACCAATGGATTTAGGGCCACCGGTCTGGTTCCGTTTAATCCAGATTCCATTGACTTTACTAAATGCCTAGGACATGGGATTAGTATCGATAAAGAAACTTATTCAGCAAATAATACTGAACCTGCAGAGCATTCAACAATCACATATGCAACTTTTAAAGATATAGTGGGAATTGAAAAAATCCAgtatattaagaatgaaaaacCCAAAGAATATTCTCCTAATTCTATATTGCGCCAACTCTGggaaaaatttcataaaaataataaagatgaAATCACAACGCAACAAGAACAGTACAAAGCAGCCGAGAAACAAACAGGTATAGAAAATAAGGAAGCGGACGAGAAAGACATAAATTCGCCAGTaagagaaaaagaaaaaacagataaattaaataatattagctCTAAATGCGAAACCAACGAAAAAAAGCAGATGTGTGAAAACTTGCTAGGAAAAGAAAATATCACCGATGAAGAAATAAAAGTTAATAAGAAAAATACAGCTTTTATGAAGAACGGAAATACAGAGACAGGTTATTTAGAGAGCCATAACTTGACATTTGAACAAAATAAAGATCAAGAGATGCCACTACAAGACATAACTATCATAAATATTGAAGATATCCCAATAATTATTGCTGATGTTCATTCTGAAAAAAACATTATCATAGAAGAGgtagataattttaataaaatcatcaTTAGTGACGTCTCTAGGAAAACTGATGAAGGATGTTTAagcgaaattttaaaacttccaAAGACGCCTGTTCGAACTGGTAAAAGAAATTCAGAAAAAACTACCTTTGTAATAACTGGAACAGCATGGAGAGATTTTAAACAAACAGAAGAAGATAAAAAAAGGATCAAAGAGATGGAAAAAGAAGAGCGTAAAAAGGAAAGACTAAGAAAAACAAAAGAAAGAGcagaaaaggaaaaagaaaagaaaattaaaaaacttaaaagtaaaatggaaaaaaagaaaaaaactaatgCGCGAAAAAGTTGCTATACCAAAAAAGAAACTGAGGGTCTATCAAAACCCTTAAGTAAAGTAAATTCTCCTCTAAGTGAGTTATCGGTAATCCCAGAAAACGTCAAAAAAGCATCAAGAAATCTATTTGGTAATGAAGATATTAACATTATCTCGGACTATACCATTGAGTCCCAAGATATCGTTGACAATAATTTAGATAGAATACTCGTAGAAATAGGACTTtcccaaaaactaaattttacaTCCTACAGTGGGATCTGTTACATCTGTACTTATAATTTAACACTTTCGAATTTTGGCATACGATGCGCTAGTTGTATAAGAAGCTATCATATTACATgcctaaaaaaacatttattacatAAGTCTAATGCGCTTATTTTTCATTGTAAATCATGCCTGGACAAGACTAAATTGTAA
Protein Sequence: MPKTQEGSKYTKNYSEADLQIALKAIDNGVAVREAAKAYKIPRATLQFRRSETFTKTSLGPCPYLSFEEENLLVNWLVESSNRGFPKRKEDLQLSVKSFLDRNPRDTPFKDNYPSDCWYKAFLKRHPDLSVRTPEAVTASSSKVSEKDIRKWFTDINAYLVSKEYDNIFQNPERILNADETGFNLCPKNSSVLAPRGSRNVYEIEHAPSKQTMTVLFTFSAAGDVTPPMIIFPGKRLKNEIYESVPETWGIGQSDTGWMKADIFTDYIVKVLHPYLEANKIQFPVILFIDGHASHLTYDVSELCKKLDIILICLYPNSTRILQPADVAAFKPIKTGWKKAVLKWRRENLTQTLKKENFAPILKTVIDDYAKSQTITNGFRATGLVPFNPDSIDFTKCLGHGISIDKETYSANNTEPAEHSTITYATFKDIVGIEKIQYIKNEKPKEYSPNSILRQLWEKFHKNNKDEITTQQEQYKAAEKQTGIENKEADEKDINSPVREKEKTDKLNNISSKCETNEKKQMCENLLGKENITDEEIKVNKKNTAFMKNGNTETGYLESHNLTFEQNKDQEMPLQDITIINIEDIPIIIADVHSEKNIIIEEVDNFNKIIISDVSRKTDEGCLSEILKLPKTPVRTGKRNSEKTTFVITGTAWRDFKQTEEDKKRIKEMEKEERKKERLRKTKERAEKEKEKKIKKLKSKMEKKKKTNARKSCYTKKETEGLSKPLSKVNSPLSELSVIPENVKKASRNLFGNEDINIISDYTIESQDIVDNNLDRILVEIGLSQKLNFTSYSGICYICTYNLTLSNFGIRCASCIRSYHITCLKKHLLHKSNALIFHCKSCLDKTKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01243459; iTF_01243461; iTF_01243462; iTF_01243463; iTF_01243464; iTF_01243465; iTF_01243466; iTF_01243467; iTF_01243468; iTF_01243469;
90% Identity: iTF_01243459; iTF_01243461; iTF_01243462; iTF_01243463; iTF_01243464; iTF_01243465; iTF_01243466; iTF_01243467; iTF_01243468; iTF_01243469;
80% Identity: -