Pter041940.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987328.1:41953185-41954051[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-06 0.00012 24.7 0.0 2 39 15 52 14 57 0.90
Sequence Information
- Coding Sequence
- ATGGGGCGCTATAAACGAAAATCATCAAGGCAATCCTGGGATGAAAATCAAATGCAGCAGGCCATATTAGCAGTCCGAGAAAAGAGAATGGGTTGGCTTTTGGCCTCGAAAACCTACAATGTTCCATTTACGACCCTTCGACGGCGTGCATCTAAGAACAATGGATGGAAAAAAGGATATATGGGCGGACATAAGGTTACCTTTAGTCAAGATTTGGAACATGAAATTGTTGAACACCTTAAGAGTTTAGAAAGCAGGTTTTTCGGTATGACAACAATTGCAGTCAGAAAATTGGCTTACGAAATAGCAGTGGCAAAAAGGATCCCTCATAGATTTTCGCATGAAACTAAAATGGCTGGTTGGGACTGGTTGAGAGGATTTAGGGAAAGAAATCCAGCCATTTCCCTTAGAGTACCTGAAGCAACGTCAGCTGCACGTGCAAGGTCCTTTAATAAACCACAAATTCGAATATATTTTGAAGCATTGACTAAAGTAATAACAGAGAACAATTTCGAACCAAACGAAATATGGAATATAGACGAATCAATCTTATCCACTGTTCCTGCGCAAAACTGTAAGATCTTCGCTACAAAAGGAAGAAAGCAAGTTGGAGTTTTGACAAGTGCAGAACGTGGTCAACACTTAACAGTGGTCTGTTGTATGAACGCTGTCGGGACTTTCGTGCCGCCAGCATTAATATTCCCTAGGAAAAACATGAAGCAGGAACTAATGGACAATGGTCCTGTAGGAGCTGTAGGATTCACCCAAGAAAACGGATGGATGAATTCTAATGTTTTCACTCAATGGATGAAGCATTTCGTCAAATTTGTTAGGCCAACACCTGAAAAAAAGTTTTGTTGCTTCTAG
- Protein Sequence
- MGRYKRKSSRQSWDENQMQQAILAVREKRMGWLLASKTYNVPFTTLRRRASKNNGWKKGYMGGHKVTFSQDLEHEIVEHLKSLESRFFGMTTIAVRKLAYEIAVAKRIPHRFSHETKMAGWDWLRGFRERNPAISLRVPEATSAARARSFNKPQIRIYFEALTKVITENNFEPNEIWNIDESILSTVPAQNCKIFATKGRKQVGVLTSAERGQHLTVVCCMNAVGTFVPPALIFPRKNMKQELMDNGPVGAVGFTQENGWMNSNVFTQWMKHFVKFVRPTPEKKFCCF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01243460;
- 90% Identity
- iTF_01243460; iTF_01243404; iTF_01243384; iTF_01243416;
- 80% Identity
- -