Pter035692.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987327.1:170343815-170345737[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-07 5.9e-05 25.7 0.0 2 39 16 53 15 57 0.91
Sequence Information
- Coding Sequence
- ATGGGTCGAGTTTATGTTCGTAAAACTGCAAGGCAAACATGGAGCAAAGAAGACATGAATAATGCTATAAACGATGTACAAAACAATGGTGTTTCTGTTAATTCCACTGCAAAGAAATATAGACTTCCAGAGCCAACCCTTCGCAGATACTTAAGAAAATATCCTGATAAGGTTTTTCCATCGAATGCTGGGCGATTTAAGCACACTTTTTCTGCTGAACAGTTACAAGATTTGTATAATTATGTCACAGAGATTGATCAGCGGGCATTTGGTTTAACTAAAGAACAATTTGGTATGATAGTATTTGATTTTGCTGAACAACGTAAAATAAATCATAGATTTAGCCAAGAGAAGAAAACAGCTGGGCGGCATTTTATAGACTGGTTTATGAAGAAATTTAAAGTGTCTCTTAGGACTCCCGAGTCGACGTCAATCGCTAGACTTATGGCTTTTAATAAAGAGAGCGTCTCccaattttttaatattcttcgtgAAACAAGACAAAAATATTCGTTTCAGCCTAACCAAATATATAATGTGGACGAGACTGGTGTTTCAACCGTAGCAACCAAAAACCCTAAGATTCTAACTCCGACAGGCAAGCGTAGGGTTATAAAAATTTCATCCGCTGAACGAGGGACAAACGTGACAGCCGTCTGCAGTATGAATGCAACCGGAAATTTTGTGcctccttttttaatttttcctaggGTAAGGACGCAACCAGCTTACCTAAACAACGCTCCCAGTGATTTTGTTGGTGTGGCCCATGAATCCGGCTGGATGACTGGTGACAACTTCATTAAATATTTAGAACATTTCATTCGATATACAAGACCTAGTGAGGACAATAGGATTCTGTTACTTATGGACAATCATGCAAGTCATCTTACTTTGGAAGCAGTGAATTTATGCAGAGGAAATTTTATTACGCTAGTTGGATTTCCGGCACACACTAGCCACCGCCTACAGCCTCTGGATGTGTCACTATACGGGCCACTGAAGACCGCTTACAGTAGAGCATGTGACAATTTTCTGACTAGTAACCCTAGCAAAGTAATTACCCTGTATGATATTGCATCTATTTTTGGTTCAGCCTATCTAAAAGTTGCTTCGGTAGCCAATGCAAAGAGCGGATTTCGCGCAACTGGTATAGAACCATTCGATCCCGATATATTTACAGACTTGGATTTTGAGACAGCAAAGACAACTGAAATAGAACAAAAAGCAACGGATCAAAATTTAGGAGCAACTTTAAACGTGGAAATGGAACCTCAAGAACAACGTGTAGAGAAAAATGAGGCAAGCACGTCCAAGCCTACGGAAACAGAACCCATTGCATCAACTTCTAAAGAAAGCAAAATAATTGGTCTTCCCCCTTTACCTTGGGGAAGTCGAGAAAGCCGACGTCCAAGAAAAAAGTTACCTTCATTGATAATTTCAAGTACACCAGTTAAGAATTCATTACAAGCAAAATACGATGAAAAAAtcgaaaaagaaagaaagaaaacgcTTCGAGAAGAGtcaaagataaataaaaaaaataataataagctccgtataaaaatgaagaaagaaaagaaaaaactcAAAACTCAAAACGTTAATAATGTCAAacgtaaagttttttctagttcATCTGATTCAGAATCCTCGGCAGATGTAGCCTATGCTGACACTGACAATAATATGGATTCAGAATTTGAAGAAGGTGATAAGCTTTGCATAATCTGCAGTGACGTGGGTAAAAATAATGAACTTTGGTTCCGATGCTCAAAATGTCAAGGCTGGGCGCATGCACAATGTACCACTTTGAATCGTAAAGAAGCTAAAGCGAAAATATGGATTTGTGACTTTTGTgtctaa
- Protein Sequence
- MGRVYVRKTARQTWSKEDMNNAINDVQNNGVSVNSTAKKYRLPEPTLRRYLRKYPDKVFPSNAGRFKHTFSAEQLQDLYNYVTEIDQRAFGLTKEQFGMIVFDFAEQRKINHRFSQEKKTAGRHFIDWFMKKFKVSLRTPESTSIARLMAFNKESVSQFFNILRETRQKYSFQPNQIYNVDETGVSTVATKNPKILTPTGKRRVIKISSAERGTNVTAVCSMNATGNFVPPFLIFPRVRTQPAYLNNAPSDFVGVAHESGWMTGDNFIKYLEHFIRYTRPSEDNRILLLMDNHASHLTLEAVNLCRGNFITLVGFPAHTSHRLQPLDVSLYGPLKTAYSRACDNFLTSNPSKVITLYDIASIFGSAYLKVASVANAKSGFRATGIEPFDPDIFTDLDFETAKTTEIEQKATDQNLGATLNVEMEPQEQRVEKNEASTSKPTETEPIASTSKESKIIGLPPLPWGSRESRRPRKKLPSLIISSTPVKNSLQAKYDEKIEKERKKTLREESKINKKNNNKLRIKMKKEKKKLKTQNVNNVKRKVFSSSSDSESSADVAYADTDNNMDSEFEEGDKLCIICSDVGKNNELWFRCSKCQGWAHAQCTTLNRKEAKAKIWICDFCV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01243248; iTF_01243254; iTF_01243255; iTF_01243256;
- 90% Identity
- iTF_01243248; iTF_01243254; iTF_01243255; iTF_01243256;
- 80% Identity
- -