Pter129572.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- clz9_184
- Assembly
- GCA_963920685.1
- Location
- OY987335.1:41701833-41702957[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-07 4.3e-05 26.2 0.0 1 40 18 58 18 62 0.87
Sequence Information
- Coding Sequence
- ATGCCCAGAAAGTATCAAAGAAAATTGGGATCTAGAAAATATGCCGATTATACAGAGGAAACCTTGCAAGCATGTCTCAATGAAATTAGAAGTGGGGAAATTTCACACAggaaagcagaaaaaaaatacaagattcctagaaaaacaattttaaacaaaCTAAAAGGCAGGCATAATAAAAAACCAGGAAAACAGCCAATATTTAGTTACGATGAAGAAAGACAATTTGTTGATTGCTTAGTTTCCTTGGGAGAGCATGGGTTCCCTGTAAACACTAGAGAATTGCgccatataataaaaaattatttaaaccgaTGTGGTAGggaagtaaaaatatttgaaaacaactTACCTGGTGCAGAGTGGGCAAATGCTTTTATAACAAGGCACCCAGAGCTGTCGGAGCGTTTTGCCGAAAATGTGAAACGCACACGAGCGGCAGTAGATGAACCGATGCTAAGAAGTTTCTTTGAAAACTTGGCCAACGAAATAAAGGACGTTCCTCCCACAAACATATGGAACTTTGACGAAACGAACCTCACTGACGACCCTGGGAAAAAAAAGGTCCTTGTCAGGAGAGGATGCAAGTACCCAGAGATTAttagaaatgcttctaaaacatCTATATCTGTGATGTTTTGTGGAAATGCTTCAGGAGAACTCCTTCCTCCGTATGTGGTTTATCGAGCCGCTAAAATGTGGACCACATGGGCGGAAAACGGTCCTAAAGGATGCCGCTACAATGCTAGTAGTTCAGGATGGTTCGATGCAAACATATTCACAGACTGGCTGCAAGGTCAGATGATACCAAGATTGAAGAAATTGGAAGAGAAGAAAGTACTACTCTGTGATAATCTTTCATCCCATATAACTGTCCATGCACTTCAACTGTGCCGCGAAAACCAAGTAAACCTAATCTGCTTGCCCCCAAACAGCACACACCTAACTCAGCCACTGGATGTGGCATTTTTTCGACCCTTAAAAATAGCTTGGAGAAAGGTGCTATCCGAATGGAAGGACACTGATGAGGGCATTCGTAACACAAACATTCAAAAGCAAAACTTTCCGCCGTTATTGTCAAAAATGATGCTTATTATTGCACCAAATTTCACAATAATTGAGTAA
- Protein Sequence
- MPRKYQRKLGSRKYADYTEETLQACLNEIRSGEISHRKAEKKYKIPRKTILNKLKGRHNKKPGKQPIFSYDEERQFVDCLVSLGEHGFPVNTRELRHIIKNYLNRCGREVKIFENNLPGAEWANAFITRHPELSERFAENVKRTRAAVDEPMLRSFFENLANEIKDVPPTNIWNFDETNLTDDPGKKKVLVRRGCKYPEIIRNASKTSISVMFCGNASGELLPPYVVYRAAKMWTTWAENGPKGCRYNASSSGWFDANIFTDWLQGQMIPRLKKLEEKKVLLCDNLSSHITVHALQLCRENQVNLICLPPNSTHLTQPLDVAFFRPLKIAWRKVLSEWKDTDEGIRNTNIQKQNFPPLLSKMMLIIAPNFTIIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01243171; iTF_01240549; iTF_01243161;
- 90% Identity
- iTF_01243171; iTF_01243161;
- 80% Identity
- -