Pter031859.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- clz9
- Assembly
- GCA_963920685.1
- Location
- OY987327.1:133821174-133835590[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0034 0.26 14.0 0.2 19 41 8 30 5 32 0.88 2 2 0.027 2.1 11.2 0.0 15 41 589 616 575 620 0.78
Sequence Information
- Coding Sequence
- ATGTTTAATAACACATATTCAGAAAGAAGAGCTGCTGAAGTATATGAAATTAAAAGATCCACCCTTCAgagccgaaaaaaaaaaattttgtctaaAATAAGCAAGGAACAGTATTTGCTTAGGTATGGCAATGATGACTCTGGTAATGAGAGTGAAAATGACGATTCccttaaatacaacaataaatacGCCGCACGCCAAATATTTACGACGGCTGAGGAGTATGAGCTgcaaaaatatattcaaaaatgCTCTGATATTAATTATGGATTAACTTATGTCGACATAGAAAAACTCGCGTATGAGTATGccatagttttaaaaaaagaaaatatacctAAAGAATGGGAATCAACTTGTTCTGCTAAAAGAGGATGGAGGGATGGGTTTATGAAGCGTCACCCAAATCTCTCACTTCGAAAACCTGAGAGTACCAGTCTTAGCAGAAGTATTGCATTTAATAAGCCCAAAGTGGAGCAATTCTTTATCAATCTGAAAAATGTTATGGACAGGTATAAATTTACAGCACAAAACATATTTAACATCGATGAAACAGGTGTCACGACAGTAATGAAGCCAACGAAAATTGTATCTACGCGTGGCAAAAAGCAAGTTTCTCAAGTGGCATCAGCTGAGCGGGGTGAACTTGTTACCTTTGTAGGCATTGCAAATGCAGCTGGTCAGGCATTTCCTCCTGTTTATGTGTTTCCTCGGAAAAGAAACCTTTCTGAATTCGTGATCAATGGTCCACCGTCAAGTTTAAGCTTGGGATCCAAAACCGGCTGGATGACATCAGAGATTTTCCCAGAAGTTTTGAAACATATTGTTAAGCTTACTAACTGCAGCTTATCAAATCGTATATTAATATTACTAGACAACCATGAATCTCATGCCACTGTGACGGTAGTTAAATATTGCCGCGATAATGGAATTTGTTTACTAAGTTTTCCTCCGCACACGACACATCGCCTTCAGCCGTTGGATGTTGGAGTTTTTGGACCCTTTAAAGCCTATTGTGAGACATCTTTTAATGACTGGTTAACTTCCCATCCTGGAGAAACTATTAGCATCAAGCATATTCCTTATTTGACAAACAAGCCTTTCTTAAAAGCTTTTTCGGCCAGCAACATTTTAAGTTTAAATCGTCCTCTTCCAGAAGTTGAAAACATCCCAACATTAGATAATCACGCAGAAACTACTGAAACTGTCAAAACATCCGTAGAAGAAAAGATAAACAGTAATAACGACTCTCCTTCATGTAGTTATGCACAACTGGGTCCACTAATAACTCCGGAAGTAGTTAGACCTTACCCAAAAGCTATAAGAAAGGAAAAGAGTAAACGTAAACCGGGTCAGTCACGCATCTACACCGATACACCGGAAAAGGAAAGATTGGAGGAATTGGAAAATTTGAAAGACATAAAACGAATTAGATtggaagaagtaaaaaaaaataaaacagccaAAATTCTAAATTTTGAACAGCCAAAGAAGagtaataaaaagagaaatattaaacaaatagaCACCTCTAGCGAGAGTGATTCTGATGTGTCCTGTCATGATACAGACGACGATGTCAGTGACGAAGTTGAAGACATGGttgaactaaaaaattataaTGCGAAAAAGGGAGACTTTGTTTTAgTACCAGCGGCAAGTTTAGATGCAGATGATCCAATTGACCCCGAAGAGGAATCAGATTCTAGTGATGATGAGGATGACACTGAAGCACTCTTAGCAgaattaaataagataaaaaaggAAAGGGCACTGGGCTTAAGAGCTGCTTCGAAATATTACTTTATACCATACAGCTCCCTACAGTGCTATCTAAGTGGTCGCCGTGGAAAGAAAAGCCAGACGGGAGGCCGCTGTACAGCACTGAGAAAAGAAGATGAAGAATTACTGGTCGCATAtttgaaaattttggaaaaaagtgGTTTTGGCCTTTCACGGAAGGAACTTTTGGATGTCATTCAACAATATGTGAATATAAATAAAACTCAAACTCCCTTTAAGAACGGACGTCCCAGAAAGGACTGGTTTATCCTATTTAGAAAGCGTAATCATCTAGCCATTAAAAAGCCCCAGTCGGTGGAATATGTTCGGAAAAAGCAAACCGATCCTTTTATAATAAATGAGTACTTCAATTTGTTGGGGACAACACTTCAACGGTTAAGTTTGGTTGACAAACCACATCTAGTATGGAATCTAGATGAAACTAGTATGTGTACCGATCCAAGTAAGACGAAAGTTGTAGGGAAAAAGGGGAGACCATCATCAAGAACTACTGGAGGTACCGGAAAAGAAAACTTTACCTGTTTGGTAGCTGCTAATGCCAATGGTGGAAAGGCTGCACCGCTAGTAATTTTTAAAGGTTTAAACCTATGTTGCTGTGAGAGGTTGAGTAGCCATAGAGTGGTTGATAGAAACATCATCTTGTGCTCGCAAGCTTGTGTGGAGTCTTTTGGTGGTGAGGATTACAGTCGGACTGATGAACTATTGGCTGTTATTCAGGAACTCAGATCCGAGCTTAATCAAAAGAATGAGCTCAATAAACGACTAAAAAGAAACCCCATCGCATTTCAGGGGGAAGTCACCGTAGCTGAATCCGAACTTAACTCTGAGATTGAAAATTTGACTAAAATCAATCGTAAACTTAGGGAAGTACATGATAAAGTACTATCGCAAATCAACAGCAGAACTTACAGTAATTCTAGCACACAAACTAATGTTGGTCTAAAGGACATTTCTAGTCAGACTGCTCTTGAGCAATCGATCAAATCTACCCTAACTGAACGCACTGTTCTTGTGGAGTGTTGTTCTCAAACCGTTACTCCGTTCAGTGTGCTTTCTGTGAATCATTGTCCTGATGACTCACATGCTAGCTGTCCTAACTTACCTTCGGAGAGTACGTACAAGTACCACACTGATAAGGTTGCTCTGTTTGATAAAAGCTCTCAAACAGAATCCTCCGATAACGTTCTTAGCTTGGCTGCGGAGCTGGACTTCTGCGCTGAAGCTACACGGACAAGTCCGCCCAGTGGTCCGAAAAACTTAAACAAGTGTCCTAACAATCAGACTCTTAAACGTCCTCAACTATTAATGATGGGAAACAGGTCTAGTCTAAGTTTCTCAGCTTTAATGAATTTTCCAGCGACAATGAGCTTAACTACTTTGGCGACCCATCCTACAGTGCGAAGATAA
- Protein Sequence
- MFNNTYSERRAAEVYEIKRSTLQSRKKKILSKISKEQYLLRYGNDDSGNESENDDSLKYNNKYAARQIFTTAEEYELQKYIQKCSDINYGLTYVDIEKLAYEYAIVLKKENIPKEWESTCSAKRGWRDGFMKRHPNLSLRKPESTSLSRSIAFNKPKVEQFFINLKNVMDRYKFTAQNIFNIDETGVTTVMKPTKIVSTRGKKQVSQVASAERGELVTFVGIANAAGQAFPPVYVFPRKRNLSEFVINGPPSSLSLGSKTGWMTSEIFPEVLKHIVKLTNCSLSNRILILLDNHESHATVTVVKYCRDNGICLLSFPPHTTHRLQPLDVGVFGPFKAYCETSFNDWLTSHPGETISIKHIPYLTNKPFLKAFSASNILSLNRPLPEVENIPTLDNHAETTETVKTSVEEKINSNNDSPSCSYAQLGPLITPEVVRPYPKAIRKEKSKRKPGQSRIYTDTPEKERLEELENLKDIKRIRLEEVKKNKTAKILNFEQPKKSNKKRNIKQIDTSSESDSDVSCHDTDDDVSDEVEDMVELKNYNAKKGDFVLVPAASLDADDPIDPEEESDSSDDEDDTEALLAELNKIKKERALGLRAASKYYFIPYSSLQCYLSGRRGKKSQTGGRCTALRKEDEELLVAYLKILEKSGFGLSRKELLDVIQQYVNINKTQTPFKNGRPRKDWFILFRKRNHLAIKKPQSVEYVRKKQTDPFIINEYFNLLGTTLQRLSLVDKPHLVWNLDETSMCTDPSKTKVVGKKGRPSSRTTGGTGKENFTCLVAANANGGKAAPLVIFKGLNLCCCERLSSHRVVDRNIILCSQACVESFGGEDYSRTDELLAVIQELRSELNQKNELNKRLKRNPIAFQGEVTVAESELNSEIENLTKINRKLREVHDKVLSQINSRTYSNSSTQTNVGLKDISSQTALEQSIKSTLTERTVLVECCSQTVTPFSVLSVNHCPDDSHASCPNLPSESTYKYHTDKVALFDKSSQTESSDNVLSLAAELDFCAEATRTSPPSGPKNLNKCPNNQTLKRPQLLMMGNRSSLSFSALMNFPATMSLTTLATHPTVRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -