Pter054092.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987329.1:18598102-18598491[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-07 2.4e-05 27.0 0.0 2 35 6 40 5 47 0.88
Sequence Information
- Coding Sequence
- ATGGATAAATACGATAAAGAGCAACTTAAAAACGCTCTAAAGGCAGTGAGAGAATATGGAATGCCTGTGGCAACTGCCAGTAAAACCTATAATATTCCAAGGACCACTCTAAGGCATAAATTGGCCGGACGAGCCCCTGAAGGTATAGGAAAACGAGGACCGGATTGTCTGTTAGGGTGCGACCTAGAAGAACGGTTGTGTGAGTGGCTGAAAAATTGTGCGAAAGCGGGATTTCCCGTAAACAAAGACGGCCTCCTTTTTTCTGTACAGAAACTTTCCGCAGAACTTTTTACGGAGATTGGCGACAAGGGCCCATATGTTGATAAGCTCCCCGGAAAAACGTGGTACACAAACTTCATGAACAGACACCCAGAGCTGTCCTATAAATAA
- Protein Sequence
- MDKYDKEQLKNALKAVREYGMPVATASKTYNIPRTTLRHKLAGRAPEGIGKRGPDCLLGCDLEERLCEWLKNCAKAGFPVNKDGLLFSVQKLSAELFTEIGDKGPYVDKLPGKTWYTNFMNRHPELSYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00847043; iTF_00847014; iTF_00416352; iTF_00416351;
- 90% Identity
- iTF_00847014; iTF_00416351; iTF_00416352;
- 80% Identity
- -