Pter012638.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987326.1:134390566-134393938[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-07 1.9e-05 27.3 0.2 2 41 35 75 34 79 0.86
Sequence Information
- Coding Sequence
- ATGAGAAATGACGTGAATGAAGCACAAAACAAAGAACCTATGATATTTCATCCCCCAACTTTATTATTCGAAAAATCTAATCTTGATACGTTAGGTTACTCAAAAGAAACTCTTGCAGCTGCAATTCAGAGCGTAAAATCAAATATATTAGGCTTAAGAGCTGCTTCGAAATATTACTCTATACCATACAGCTCCCTACAGTGCTATCTAAGTAGTCGCCGTGGAAAGAAAAGCCAGACAGGAGGCCGCTGTATAGCACTGAGAAAAGAAGATGAAAAATTACTGGTCGCATATctgaaaattttggaaaaaagtgGTTTTGGCCTTTCACGGAAGGAACTTTTGGATGTCATTCAACAATATGTGATTAGAAATAAAATTCATACTTCCTTTAAGAACGGACGTCCCGGAAAGGACTGGTTTATCCTATTTAGAAAGCGTAATCATCTAGCCATTAAAAAGCCCCAGTCGGTGGAATATGTTCGGAAAAAGCAAACCGATCCTTTTATAATAAATGAGTACTTCAATTTGTTGGGGACAACACTTCAACGGTTAAGTTCGGTTGACAAACCACATCTAGTATGGAATCTAGATGAAACTAGTATGTGTACCGATCCAAATAAGACGAAAGTTGTAGGGGAAAAGGGGAGACCATCATCAAGAACTACTGAAGGTACCGGAAAAGAAAACTTTACCTGTTTGGTAGCTGCTAATGCTAATGGTGGAAAGGCTTCACCGCTAGTAATTTTTAAAGGTTTAAACCTATGGTCCAATTGGGTACCCAAGAGCAAAAATAATAAATGCCCTGACATGACATTTGCTGACAGCAAAAATGGTTGGATAAATTGTGAAATCTtcatcaattttttaaagaataatcTGGTTCCTGCATTGACTGAAGAAAGACCTGTATTGATCATTTACGACGGACATGCTACACATGTCACGAAAGAAGTAATAATTGCATTCGCCAAAACTCAAAGTATAGAAATTTCAAAATTGCCAGCCCATACTAGTCATTTGCTGCAACCCCTGGACCTGTCTATTTTTAAATCAGTTAAGGTAACTTGGGATGAAAATTTGTGTGTTTGGCAACGAAAAAATCCAGGACGCCGTATTTCAAAGGCAGAGTTTGCACTCCTTTTTGGTAAAGTTTGGGCGAACTTGCATATAAATGTTATCAAAAGTGGTTTTAGAAAAGGAGGAATATTTCCATTCAATAGGGAAGTAATTAGCCCTGAAACAAGACACCATTGCAAATTTGGAACCTTAACAAACCAAACCGAAGATACACCGGGGCAAAGtgatgcatttaaaaatattctatcagAAACAATACGATCAAATGAACCGGCAAATCAAGTAATCAAACCATGGaaaaaaatttcatcaggtgctgaAGTTTTAACATCTACGGTGGCACACGCAATTCTTGATAGCAAGAACACGACagaaaagaaacaaacaaaaattaatggTACTGAGCCAAACGATAATATTCCAAGCACTAGTGGTACTGCATTAAAGAGAAAATTTAAACGCCAGGTAAAAACAAACCTAAACTCATCTTCTGAATCTTCAGATTATGAAGACCCAACTTATATCGACACCGATGACGACATGAATTTGGAATCAAATGACTCTAGAGATAGTAGCCTATCAAGATCCAGTCAAAGGAATGACAAAAATTACTCTGGAGAAACTTTAATATCCTGA
- Protein Sequence
- MRNDVNEAQNKEPMIFHPPTLLFEKSNLDTLGYSKETLAAAIQSVKSNILGLRAASKYYSIPYSSLQCYLSSRRGKKSQTGGRCIALRKEDEKLLVAYLKILEKSGFGLSRKELLDVIQQYVIRNKIHTSFKNGRPGKDWFILFRKRNHLAIKKPQSVEYVRKKQTDPFIINEYFNLLGTTLQRLSSVDKPHLVWNLDETSMCTDPNKTKVVGEKGRPSSRTTEGTGKENFTCLVAANANGGKASPLVIFKGLNLWSNWVPKSKNNKCPDMTFADSKNGWINCEIFINFLKNNLVPALTEERPVLIIYDGHATHVTKEVIIAFAKTQSIEISKLPAHTSHLLQPLDLSIFKSVKVTWDENLCVWQRKNPGRRISKAEFALLFGKVWANLHINVIKSGFRKGGIFPFNREVISPETRHHCKFGTLTNQTEDTPGQSDAFKNILSETIRSNEPANQVIKPWKKISSGAEVLTSTVAHAILDSKNTTEKKQTKINGTEPNDNIPSTSGTALKRKFKRQVKTNLNSSSESSDYEDPTYIDTDDDMNLESNDSRDSSLSRSSQRNDKNYSGETLIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242864;
- 90% Identity
- -
- 80% Identity
- -