Pter104129.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987332.1:89749104-89750909[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-07 1.8e-05 27.3 0.0 3 40 16 52 14 56 0.92
Sequence Information
- Coding Sequence
- ATGGGAAAATATAAAAGGACGACCCAGCGAAGGTCTTATTCCAAAGCAGCTTTATCCGCAGCATTAGATGCTGTTAACGATGGAATGGGCAAACGGGAGGCAGGAAGACGGTTTAATGTGCCAGAAGCGACTCTCAGGCGACACCTGAAAATAAAGAATGATGACAGGCAGTTATACTCAAGTTCCTTGGGCAGAGCTCCTGTTTTTACAAGGACTCAAGAAGAGGAACTTACCAGACACACACTTAAGTTGGGTAAATTATTTTTTGGGCTAACACGTGCCGAACTACGCTGTATTGCTTACGACTATGCTGAGGCCAACCACATCAAACACAACTTTAATGTGGAGAAAAAAATGGCTGGAAAGGACTGGTATGTTGGATTTATTCGACGAAATCCTACAATAAGCCTTAGAAAACCTGAAGCAACCAGTATAAACAGAATTACAGCGTTCAATAGGATGGAGGTTGATCGTTTTTTCGCAAATTTGGAAAATGTACTGTCAAAGTATCGTTTCGCATCTGACCGGATTTATAACGTCGATGAAAGCGGCATATCTACAGTGCCCAAAGAAAGTTTAAAGAGACTGGGCCCAAAAGGCATTAAGCAATTTGGAGTTATCTCCTCGTGGGAACGAGGTAAGAACGTAACTGTAATATGCGCTATGAGCGCAAGTGGAAACTACATTCCACCGCTCTTTATATTTCCCAGAGCAAGGATGTCTCCACTGCTAGAAAAAAATGGCCCACGAGAAGCTGTATACACCTGCACCAAGAACGGTTGGAGTAATGAGGAAGTTTTTTTCCAATGGTTAAATCATTTTCAAAGAAAAGTGAAGTCAGATGAAAATAATCCGATTTTACTGATTTTGGACAACCACAGCAGTCATGTCTCACTTCAGATTTATACGTTTTGCAAGCAACATTTTATTGTTATGTTAAGCTTACCTCCGCACACGTCACACAGACTCCAGCCCTTGGACTTAACGTTCTTTGGTCCTCTCAAAAATGCCTACAGCCGACagtgtaatatttttttaaaaactaaattaaactctGGGGACAATGATGGTAAGCTGTCTCATTATGATATcgctgaaatatttaatttagcatatTGTGATACAGCAAATATGGAGAAGGCCATTTCAGGTTTTCGGTCAGCAGGAATTTATCCCCTACACCCTGGCAAATTTTCGGAAGACGACTTTACTCCAGCTGAAAATTTATTAAGCCGTGAACATAATGACATAGAAAACAATAATGCTGTAAATGAACATATCACTGCTACCACAAGTAAAGTTTCTGGGCCAGATTCACCTCAGCCATCATCTAGCGGACTtcaacaaactaaaaaaaaatcaccATCAGATCATGTTAGTGTTGAAGTTGTTTCACCAGTGCCAGCACCACAGAAGAAAAGAGCTCAACAAAAGGGTAGTCGTGCAAAGCAACAATCTGAAATATTGACGGCTACTCCTTTGAAAACAATGCTGGaggaaaaagaattaaaaaaatccaagaaaattcaaaaagttaccttaaaagctaaaaaaaaagttaaaaaacaagtATTTGTAGAAACAGACAGTGAAAGTGAAGGAAGCTTAAATGAGAAGTGGCTGTGCGATGATGATGAACTGGACGATATTGATGAAGGAGATAAAAACTATTGCAACATATGTGGAGAATTCGGCAAATCTGGAGAAATATGGTATCGATGTGTGTCATGTGCTGATTGGTCTCATAAAGCCTGCAGTGGTCAATCCGCTCCAAAAGACTATACATGTGACTTCTGTAGACACTAA
- Protein Sequence
- MGKYKRTTQRRSYSKAALSAALDAVNDGMGKREAGRRFNVPEATLRRHLKIKNDDRQLYSSSLGRAPVFTRTQEEELTRHTLKLGKLFFGLTRAELRCIAYDYAEANHIKHNFNVEKKMAGKDWYVGFIRRNPTISLRKPEATSINRITAFNRMEVDRFFANLENVLSKYRFASDRIYNVDESGISTVPKESLKRLGPKGIKQFGVISSWERGKNVTVICAMSASGNYIPPLFIFPRARMSPLLEKNGPREAVYTCTKNGWSNEEVFFQWLNHFQRKVKSDENNPILLILDNHSSHVSLQIYTFCKQHFIVMLSLPPHTSHRLQPLDLTFFGPLKNAYSRQCNIFLKTKLNSGDNDGKLSHYDIAEIFNLAYCDTANMEKAISGFRSAGIYPLHPGKFSEDDFTPAENLLSREHNDIENNNAVNEHITATTSKVSGPDSPQPSSSGLQQTKKKSPSDHVSVEVVSPVPAPQKKRAQQKGSRAKQQSEILTATPLKTMLEEKELKKSKKIQKVTLKAKKKVKKQVFVETDSESEGSLNEKWLCDDDELDDIDEGDKNYCNICGEFGKSGEIWYRCVSCADWSHKACSGQSAPKDYTCDFCRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00195974; iTF_00195975; iTF_00195976; iTF_00195977; iTF_00195978; iTF_00195979; iTF_00195980; iTF_00195981; iTF_00195982; iTF_00195983; iTF_00195984; iTF_00195985; iTF_00195986; iTF_00195955; iTF_00195987; iTF_01242928;
- 90% Identity
- iTF_01242928;
- 80% Identity
- -