Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: clz9
Assembly: GCA_963920685.1
Location: OY987330.1:102953752-102955344[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.4e-07 1.9e-05 27.3 0.1 3 39 20 56 18 61 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.4e-07	1.9e-05	27.3	0.1	3	39	20	56	18	61	0.88

Sequence Information

Coding Sequence: ATGGGTcgaatttacaaaaaaaagttgggATCCAGAAGATATCTCATGTACAATGCTGAGCAACTGCAGCAAGCTGTAGGAGCCGTAAAAAATTATGGAATGTCTTATGCTGAAGCTGCTAGGCGGTataagataaacaaaaaaacgCTTTGGAACAAAGTTAATGGTAAGCATCTTGCAAAGCCTGGGGGGCAACCTGTATTAACAGAAGTGGAAGAACGTCATATCGTGGACGTTGTTGTTGCATCAGCAGAATATGGTAGCCCAATAACATCACTAGAGCTTAGAATGATAGTCAAAAGATATTTAGATTCTGTTGGCAAACAAATCAGTAAATTTAGTGACAATCTTCCTGGAACTGAATGGGCTCTTAATTTTATAGATCGACACAAGGACTTATTATCGCAAAGAACTTGTCAGAATATTAAGGGTGTAAGAGCTCTAAAAAATGAAGATGAAATCAACATGTATTTTGATAACCTTGCCGAGAGTTTGAATAATGTGCCAGTTCAGAACATACTTAATTACGACGAAACAAATTTATCAGACGATCCAGGTGCCAAAAAATGTATCTTCAGGAGAGGCATAAAATATCCAGAAAGAATTATGAACACGAGCAAAGCGTCTATATCTGTCATGTTTGCTATCAGTGGTGATATGAATGTCCTGGCCCCTTACGTGGTTTATAAAGCCGAAAGGCTTTATGATCAGTGGACCATCTGTGGTCCTCCAGGAACTCGATACAATAGATCCAAGTCAGGATGGTTTGACGCGTTTACATTTCAAGAGTGGTTTTCAACTATTGTATTACCATGGGCAAAATCCAGACCTGGGCCCAAGGTGATTATTGGGGATAACCTTTCGTCGCACTTGAATGTTGATATAATTATAGCATCCCAGCGTAACAACATCAGATTTGTATTTTTGCCTCCCCATTCCACCCATCTTACTCAGCCCTTGGATGTCGGGTATTATGCCCCGATGAAAAGGGCCTGGCGAAAATTATTAGAACAATTTAAACTGCAAAATCCAGCGgaaaaggttttaaataaaacCTCCTTTCCATCGCTCCTAAAAAAATTAGTAGAATATTTGAAACTAAAGGATAAGGAAAATATTGCAAGCGCCTTCAGGGCCACCGGAATCATTCCTTTGAACAGGAATCAAGTTTCGAAAAAGCTGCCCCAGGCAAGGGCAGAAGAACACGTCGTGATGCAAAGAGTGAGCGATAGTCTGCTAacctttttaaaagaaacaagAAATCCGTCACAGCCTGCGGAGAAAAAGCGAAAGAAAATGTTGAAAGTGGCGCCAGGGAAATCGGTTTCCTATGAAGAACTTTGGGAAGACCAAGAAAATACCACACCCGAAAGTGAAGGGAAAAAGATATTTGAAGATGAAGAAGATCAGGACAACAATGATGACCTTTATTCTATTGAAGAGACCCTTGAAGAGAACTTTGAAGAAGACAGCGATGATGCCCTTCCACTGGATCATATTATACCAAAACCAGGAAAATTTGTTGTGGTAGCATTTCCAACAAAAAAAAAGCATTCGGCACTTTGTGGGCCAAATATTGGAGAGTCAGGATAG
Protein Sequence: MGRIYKKKLGSRRYLMYNAEQLQQAVGAVKNYGMSYAEAARRYKINKKTLWNKVNGKHLAKPGGQPVLTEVEERHIVDVVVASAEYGSPITSLELRMIVKRYLDSVGKQISKFSDNLPGTEWALNFIDRHKDLLSQRTCQNIKGVRALKNEDEINMYFDNLAESLNNVPVQNILNYDETNLSDDPGAKKCIFRRGIKYPERIMNTSKASISVMFAISGDMNVLAPYVVYKAERLYDQWTICGPPGTRYNRSKSGWFDAFTFQEWFSTIVLPWAKSRPGPKVIIGDNLSSHLNVDIIIASQRNNIRFVFLPPHSTHLTQPLDVGYYAPMKRAWRKLLEQFKLQNPAEKVLNKTSFPSLLKKLVEYLKLKDKENIASAFRATGIIPLNRNQVSKKLPQARAEEHVVMQRVSDSLLTFLKETRNPSQPAEKKRKKMLKVAPGKSVSYEELWEDQENTTPESEGKKIFEDEEDQDNNDDLYSIEETLEENFEEDSDDALPLDHIIPKPGKFVVVAFPTKKKHSALCGPNIGESG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01238800; iTF_01240413; iTF_01238768; iTF_01240407; iTF_01240365; iTF_01238785; iTF_01240417; iTF_01242977; iTF_01238786; iTF_01242978; iTF_01238787; iTF_01242979; iTF_01238788; iTF_01238789; iTF_01240389; iTF_01240421; iTF_01242981; iTF_01238790; iTF_01242982; iTF_01238792; iTF_01240395; iTF_01240396; iTF_01238797; iTF_01240397; iTF_01240398; iTF_01240399; iTF_01240400; iTF_01240401; iTF_01243031; iTF_01242974; iTF_01242975; iTF_01238784; iTF_01242976;
90% Identity: iTF_01240407;
80% Identity: -