Pter057225.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987329.1:50542821-50544573[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-08 4e-06 29.5 0.0 2 41 19 59 18 60 0.93
Sequence Information
- Coding Sequence
- atggttcGAACCTACAAACGCCAAATTGGCGCAAGGCGATATCGTGATTATACTGATAATCAGTTACAAGAAGCCATCAACAATATAAGGAATGGTCGTATGGGCTACATCGAAGCTTCAAACATATTCAAGATTCCACGAAAAACACTAATGAACAAAGTGAAAAATAAACACACTGGGCCAGTAGGAGCACCACCTGTTATTTCTCCCGAGGTTGAACGAAGTTTGGTTGATGTGATCATTGCCAGCTCGGAATATGGATGTCCCTTGACAATGACAGATGTAAGGATGGTTATGAAGGCTCATTTAGACAAGGAAGGCATCAAATTACCACAGTTCAGGAATAATGTTCCAGGAATCGATTGGTGCCTGAATTTTGTTAAACGCCATAAGCATTTTCTCACCCACAGACATTGCCAGAACATTAAAAGGGCAAGGGCTCAGAAGACAGACACAGAGATGGAAGAATATTTCAATAATTTGTATGAAAATGTCAAGGATGTCCCACCAAACAGAATACTAAACTACGATGAAACCAATTTAACGGATGACCCCGGAAGCTCTAAGTGCATTTTCAGAAGAGGCATAAAATATCCTGAAAGGGTTCTAAATTCTACAAAGACGTCAATTTCTGTAATGTTCGCGGCTACAGCTGATGGATCCACTCTGCCTCCATACACGGTTTACAAGGCTGAGCGTATTTATGATGCTTGGTGTATTGGAGGACCAACCGACGCCAGATACAACCGAACAAAGTCTGGTTGGTTTGATCAATATTGCTTCGAAGATTGGTTCACCAGAATGATCATACCATGGGCTAAAGCCCTAGATGGCCCAAAAGTATTAATTGGGGACAATCTCTCCAGCCATCTAAATATCTCCATTATAAGAGAGTGCCAACGGCACGATATCAGATTCATATTTCTCCCCGCAAACTCTACACATTTGACTCAACCTCTTGATATAAGCTTTTTTAAGGCTCTTAAAGTCAGTTGGAGGAAGATATTGACGACATATAAAATAAGAAATCCACGAGATCAAACCCTGAACAAATCATCGTTTCCCAATCTTCTCAAGAAATTGGTTGAGGAAATTAAACTGCGGGAGGCAAACGTTATAAAAAACGGCTTTAGAGCTGCAGGGATTTTCCCCTTCGATAAACATGAAGTGCTCAAAAGGTTACCCAAACAACGATTCGAAGCAACTAATAGCAAAGTTGATGAGGCGCTTCTGACATACCTGCAAGAAACTAGGACCAAATCAGAAGATACTGtccaaaaacgaaaaaaaaatggtGAGGGTGGAACCGGCTCAAATAATGATCAGGAAAGCAACATCGATAATATGGAGGGTACTAGCAGCAAAACTTTACACATTCATAAAGCAAAGACTGATTCAAATAAATCGAAACTTGATACTATTAAGCCATTAGATTTTATTATCGCAGCAGTTCCTGGAAAGAAAAATTGGAAGCATTTCGTAGCACAAGTTATAGAAAAAGATGTTGACTCGTGCAACgttaaatttctaaaaaaaaaggcTGATGATAGATTCTATTTCCCTGTTGTGGATGATACTGGCcttatattagaaaatgaaatTACGGCTGTCCTAGATCCGCCCGAGCAATGCTCAAAGTCGAGACAACTGTTTAATTTTGCGAATtttgatttcaaaaaatttaagatACAATAG
- Protein Sequence
- MVRTYKRQIGARRYRDYTDNQLQEAINNIRNGRMGYIEASNIFKIPRKTLMNKVKNKHTGPVGAPPVISPEVERSLVDVIIASSEYGCPLTMTDVRMVMKAHLDKEGIKLPQFRNNVPGIDWCLNFVKRHKHFLTHRHCQNIKRARAQKTDTEMEEYFNNLYENVKDVPPNRILNYDETNLTDDPGSSKCIFRRGIKYPERVLNSTKTSISVMFAATADGSTLPPYTVYKAERIYDAWCIGGPTDARYNRTKSGWFDQYCFEDWFTRMIIPWAKALDGPKVLIGDNLSSHLNISIIRECQRHDIRFIFLPANSTHLTQPLDISFFKALKVSWRKILTTYKIRNPRDQTLNKSSFPNLLKKLVEEIKLREANVIKNGFRAAGIFPFDKHEVLKRLPKQRFEATNSKVDEALLTYLQETRTKSEDTVQKRKKNGEGGTGSNNDQESNIDNMEGTSSKTLHIHKAKTDSNKSKLDTIKPLDFIIAAVPGKKNWKHFVAQVIEKDVDSCNVKFLKKKADDRFYFPVVDDTGLILENEITAVLDPPEQCSKSRQLFNFANFDFKKFKIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242720;
- 90% Identity
- iTF_01242714; iTF_01242720; iTF_01242721; iTF_01242722; iTF_01242723; iTF_01242724; iTF_01242725; iTF_01242727; iTF_01242728; iTF_01242729; iTF_01242719; iTF_01242528;
- 80% Identity
- -