Pter078084.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- clz9_113
- Assembly
- GCA_963920685.1
- Location
- OY987330.1:100391915-100393783[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-08 2.1e-06 30.3 0.3 6 44 23 61 22 62 0.94
Sequence Information
- Coding Sequence
- ATGCCTCGACACTACCAAAAAAAGTTTGGACCACGGGGAAAGAAAAATTATAATGCAATATTTGTTGAAAGGGCAGTGGCGgcggtaaaacaaaaaaaaatgtcaatgAGGGCTGCCGCTGAGCGATTTGCCGTCCCTTACTCGACACTTAATGACCATTATCACGGACGACATCAGCTTAAGTATGGGAGGCCGTCCGCTCTAGatgaaaacgaagaaaaaatgtTGACTGAAGGCCTGGAACTTTGCGCTAATTGGGGATTTCCCTTAAAGCCCATCGACATGAAACATATCGTTAAGCAATATTTAACAAAGCGTGGAGTGACAGAACCAAGGTTTATAGAGAACTTACCTGGAACAGACTGGTTTAATGGTTTTATGAGGCGAAATCCCAATCTTACCATAAAACTAGCAGAAAATACAAAACGGGTTCGAGCAGCGTTAAGCTACGAGTTAGTGGAAGAttatttcaataatttaaaaGATGCCGTCAAGGATATTCCAACTTGTAATATCGTTAATTATGACGAAACCAATTTCGTAGATGACCCCGGCGCTGTGAAAGTCGTCTTAAAAAAGGGCACCAAACATGCACATAGGGCCATAGATAGCACGAAAACTAGCACCACGGTGATGTTTGCGATAGCAGGAGACGGCACAATGCTTCCACCATACATTGTGTATAAAGCAAAACATTCGTATGTGGGGTGGACTGAAGGGGGTATAGAAGGAGCCAGATACAATCGCACTCTCAGCGGGTGGTTTGATTCCACCATCTTTGAAGACTGGTTCTATTCTATTGTTTTGCCGCATTTTAAAAAGCTAGATGGAGATAAAGTTCTACTTGGAGACAATTTAAGTAGCCACATCACAATGAGCGTAATACAGGAATGCCAAAATAACAATATTAGGTTTGTCCTGTTGCCACCCAACTCTACACACCTGCTACAACCTTTAGATGTAGCTTACTTCCGACCTCTTAAGGCGGCATGGAAAAAGGAATTAGAAAAATGGAAGTTAAAAAATAGAGGAGTGCTTCCtaaaactttatttccaaaacttCTTAAGGATACTGTGGAGTCTGTTGGTCTCAAATCTGAAGCCAACTCTATTGCAGGGTTCAAGGCATGTGGCATCGTTCCATTCAATCCGGACGCTGCACTAAAGAAAATTCCACGTAAAACAGTTGACGATACACTTAAAACATCATGGACAGATGCTATAATAGATCATCTTGAACAACTTCGAACGGGTCCAACGAAGACTATAAAACGAGGGAAAAAACTGAATGTATCTGCAGGAAAGAGCATAGGGACATCGGATCTGTTAATAGCTGAATCCAGACGCACATCACAAAACGTTAAAACCAGAAGGCAGAGACGGGAGACAAGTGACAGCCAATCAGAAGAAGAACGTGGACAAGCTAAAAATAGGAATATAAGTGACATTGAGTCAGAAAAAGAGTCGGATTTAGAGGTTGCGGAATCAGATAAGTCATTCACAGAAGAATACGAAATAGGAGAACCCTCTACCCTAAGCGAAAGCTTGGCAGAAGAGCAAAATTCTTTGCCAGAAGGGCAAAATTCTAAGGTTTTTAAAGTAAAAGACTACGTATTAGTAAAATATAAAACCAACAAAAGAGACAGACATTTTATTGCCAAGATTGAAACTATCTCAGATGAAGAACTAACTGTTAATACAATGCGCAAGAAGGAGTCAAAAAAAGATGTGTTTTTTGTGTATCCGCAAATTCCGGACCTATCAATAATTACGTTTGAGCAGATTAAAAGAAAAGTTAACTTGAAAGGAGAAAAACGTGGAAGGCACTTCTTTCATCTACGCGAAGAAGAACAAGATCTTCTGGAAtaa
- Protein Sequence
- MPRHYQKKFGPRGKKNYNAIFVERAVAAVKQKKMSMRAAAERFAVPYSTLNDHYHGRHQLKYGRPSALDENEEKMLTEGLELCANWGFPLKPIDMKHIVKQYLTKRGVTEPRFIENLPGTDWFNGFMRRNPNLTIKLAENTKRVRAALSYELVEDYFNNLKDAVKDIPTCNIVNYDETNFVDDPGAVKVVLKKGTKHAHRAIDSTKTSTTVMFAIAGDGTMLPPYIVYKAKHSYVGWTEGGIEGARYNRTLSGWFDSTIFEDWFYSIVLPHFKKLDGDKVLLGDNLSSHITMSVIQECQNNNIRFVLLPPNSTHLLQPLDVAYFRPLKAAWKKELEKWKLKNRGVLPKTLFPKLLKDTVESVGLKSEANSIAGFKACGIVPFNPDAALKKIPRKTVDDTLKTSWTDAIIDHLEQLRTGPTKTIKRGKKLNVSAGKSIGTSDLLIAESRRTSQNVKTRRQRRETSDSQSEEERGQAKNRNISDIESEKESDLEVAESDKSFTEEYEIGEPSTLSESLAEEQNSLPEGQNSKVFKVKDYVLVKYKTNKRDRHFIAKIETISDEELTVNTMRKKESKKDVFFVYPQIPDLSIITFEQIKRKVNLKGEKRGRHFFHLREEEQDLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242594; iTF_01242595; iTF_01240292; iTF_01242596; iTF_01242565; iTF_01240207; iTF_01240208; iTF_01242514; iTF_01238708; iTF_01242585; iTF_01242586; iTF_01242587; iTF_01242588; iTF_01238941; iTF_01242590; iTF_01242591; iTF_01242592; iTF_01047106; iTF_00755492; iTF_01242566; iTF_01242569; iTF_01242571; iTF_01240206; iTF_01238705; iTF_01238710;
- 90% Identity
- iTF_01242594; iTF_01242595; iTF_01240292; iTF_01242596; iTF_01242565; iTF_01240207; iTF_01240208; iTF_01242514; iTF_01238708; iTF_01242585; iTF_01242586; iTF_01242587; iTF_01242588; iTF_01238941; iTF_01242590; iTF_01242591; iTF_01242592; iTF_01242571; iTF_01240206; iTF_01238705; iTF_01238710;
- 80% Identity
- iTF_01242594; iTF_01242591; iTF_01242592;