Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: clz9
Assembly: GCA_963920685.1
Location: OY987330.1:79885003-79888593[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.3e-08 1.8e-06 30.6 0.0 3 40 47 84 45 87 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.3e-08	1.8e-06	30.6	0.0	3	40	47	84	45	87	0.93

Sequence Information

Coding Sequence: ATGGCCGGGGCTGACGAACTAAAAATCATTCTTTGCGATGTAGGGCTTGAGCTATATGAATCTGATTTTGCAGgtttaaacatggtcagaaaatacaaaaaaaagatTGGTGGCAGACCGTATCGAAACTATACCACGGCCAACCTTCAAGATGCCTTGGATGCGGTAAGAGATGGAATGTCTGAGCGTCAGGCTACAAAGGTATTTAAAATACCTAGAGGAACTTTGCAAAATAAACGAAAGAATTTGCATCAAAAACAAGCTGGAGGTCAAACAGCCTTAGGTGAAGATGCTGAAAAGGTTCTAGAGAAATCACTGGTAGCTTTGGCCAACTATGGATTTCCTGTAAACGCTACGGAACTAAGACGACTTGTTAAGGACTACCTTGATAAAAAGGGCGTACAAATTAAAGTTTTTAACGATAATTTGCCGTCATATGAATGGGCTAAATTATTTTTGGCTCGACATGGAAATTTAACGGAGCGGTTTGCTGCAAATATAAAATTGGCAAGAGCGGCAATCACTCCCgaatgtattaataattattttgataatctCGAGCAAGAAATTAAAGATGTGTCTCCCAATAATATCTATAACTATGATGAGACCAATTTAACGGACGACCCtggtcggaaaaaaattattacaaagaGGGGTTGTAAATACCCAGAGCGAGTTATTAACTCATCGAAAAGTGCAATATCACTTATGATATGTGGAAATGCTGTAGGAGAATTGTTACCCCCCTACGTGGTCTACAAATCCACGAAAAATTTATATGATACATGGACGCTGAACGGTCCCAAAGGAACGCGATATAATAGGACCATTTCAGGGTGGTTTGACAGCGAATGTTTTGAAGATTGGTTCAAATCATTAGTACTTCCGGTGCTAAAGAAAAAAGAAGGTGTAAAAATTTTAATCGGGGACAATCTTTCCTCACATataaactcaacagttatagAGTTGTGTGAAGAAAATAACATTCGGTTCGTTTGTTTACCCCCCAACACAACCCATTTAACGCAACCGTTAGATGTCGCATTCTTTCGACCTATGAAGATTGCGTGGCGCAAAATTTTGGAGAGTTACAAACTTCAAGGATCCAAAACTTTAGCAAAATCAGATTTTCCTCAGTTGCTTCTAACACTAATGACAAGTTTGAAAGAAAACTGTCAACAAAATTTACAAAGTGGATTTCGTAAAACTGGGATACATCCTTTGAACCGAAGAGAAGTGCTTAATAAAATACCCCATCTGACTGGTGAGGAAGATGGCATAGGAGTAGACACACCGGTATTAAGTGAAACCGTGCTTGACTTTTTAAAAGAACAAAGATTCGGAAAGGAGAAACAAACCCAAAGAAAAAAGAAGATTACGATCACTCCGGGTAAGAGCGTGGGATCTTCCGATCTAGCTATACCCTCTACCTCAACCAATTCAAATAATATGTATGATCTAGCTATACCCTCCACCTCATCCAATTCCAATAACATTTATGAAACACTCGAAAGTGAAGATAGTGACAGTGGCAAAGCTTTACAAAAAACAATCAAAAGAAAGCGAGAGACACCAAGTGAAATGGAGAAACAAACCAAGAAAATCAGCAATAAGGCTTTGAAAATAAAGAAACGATCTCAAAGACAAGAAAGTGACGATTCCTCAAGTGCAGACGAAATATTGAGCCTTCATGACTCCTCATCAGAATATAATGAAGACTTTTCGGATCTGGAAAACATTGAGGCAACTCAAGCAAAATCTCCATCACCTAATAGACATGTGCAATATAACGTATTCGATTACGTTGTGGTGCAGTACGAAAAACAGTTCTACCCTGGAAAAGTTATTGAACATTCCAAAGATGGATTGAAGGTCTCTGTGTTAGCCAAAAGTGGTATTAGTCAATTCAAGTGGCCTAAACCAGAAGACGTTGTTTGGTACAAGTGGTGCGATATTATAGAAAAAATTGAAGAACCTTTCGCTCTAGGCAACAGAGGGTTTTTTAAGATCcctgaaatgtcaaaatatgacgATAATATATGTATTTAG
Protein Sequence: MAGADELKIILCDVGLELYESDFAGLNMVRKYKKKIGGRPYRNYTTANLQDALDAVRDGMSERQATKVFKIPRGTLQNKRKNLHQKQAGGQTALGEDAEKVLEKSLVALANYGFPVNATELRRLVKDYLDKKGVQIKVFNDNLPSYEWAKLFLARHGNLTERFAANIKLARAAITPECINNYFDNLEQEIKDVSPNNIYNYDETNLTDDPGRKKIITKRGCKYPERVINSSKSAISLMICGNAVGELLPPYVVYKSTKNLYDTWTLNGPKGTRYNRTISGWFDSECFEDWFKSLVLPVLKKKEGVKILIGDNLSSHINSTVIELCEENNIRFVCLPPNTTHLTQPLDVAFFRPMKIAWRKILESYKLQGSKTLAKSDFPQLLLTLMTSLKENCQQNLQSGFRKTGIHPLNRREVLNKIPHLTGEEDGIGVDTPVLSETVLDFLKEQRFGKEKQTQRKKKITITPGKSVGSSDLAIPSTSTNSNNMYDLAIPSTSSNSNNIYETLESEDSDSGKALQKTIKRKRETPSEMEKQTKKISNKALKIKKRSQRQESDDSSSADEILSLHDSSSEYNEDFSDLENIEATQAKSPSPNRHVQYNVFDYVVVQYEKQFYPGKVIEHSKDGLKVSVLAKSGISQFKWPKPEDVVWYKWCDIIEKIEEPFALGNRGFFKIPEMSKYDDNICI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01242561; iTF_01242563; iTF_01242564; iTF_01242567; iTF_01238696; iTF_01238697; iTF_01238698; iTF_01238702; iTF_01242549; iTF_01242550; iTF_01242551; iTF_01242552; iTF_01242553; iTF_01242554; iTF_01242555; iTF_01242556; iTF_01242525; iTF_01242557; iTF_01242558; iTF_01242559; iTF_01242560;
90% Identity: iTF_01242561; iTF_01242563; iTF_01242564; iTF_01242567; iTF_01238696; iTF_01238697; iTF_01238698; iTF_01238702; iTF_01242549; iTF_01242550; iTF_01242551; iTF_01242552; iTF_01242553; iTF_01242554; iTF_01242555; iTF_01242556; iTF_01242525; iTF_01242557; iTF_01242558; iTF_01242559; iTF_01242560;
80% Identity: iTF_01242561; iTF_01242549; iTF_01242550; iTF_01242551; iTF_01242552; iTF_01242553; iTF_01242554; iTF_01242555; iTF_01242556; iTF_01242525; iTF_01242557; iTF_01242558; iTF_01242559; iTF_01242560;