Pter112983.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polydrusus tereticollis
Gene Symbol
-
Assembly
GCA_963920685.1
Location
OY987333.1:61445129-61454798[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-08 1.2e-06 31.1 0.0 2 37 168 203 167 209 0.89

Sequence Information

Coding Sequence
ATGAAACCACTATTCTGCAATGATAATCTGAACCTAAAATTACGTCAGAGAATGGTAAGAACCTACATATGGTCAGTGTTGCTGTACGGGGCAGAGATCTGGATAATTAAGGCCGCTACAATTAATCGGCTGGAAGCGTTCGAGATGTGGTTACACCGGCGAATGCTGAGGATACCCTGGACAGCTATGCAGACCAACGAAATGGTGCTAAACAGGGCCGACACAACACGTTTGCTACTGAATACAGTTAAATGCAGGAAAATTTCATATCTCGGACATGTATTCAGAGGAGAGCGATACAGAATCCTGCAACTGATCATGATGGGAAAGGTGGAAGGACGTAGAGGAGTGGGAAGAAGACAAGCTTCCTGGCTGAGGAACATCCGTGAATGGACCGGTATACGCAGCGCAGAGGAACTGTTCCGATTGGCGCAGAATCGAGAAAGACTCGCCCAAatgccAAGAAATTATAAACGGAAAACTGAGAAAGCTAGTTGGACTGCGGATGATTTGTCAAATGCAATTGATGAGGTGAGGAATGGAATAGGTCAAAGACAAGCTGCAAGAAATCACCACATTCCGTTTGCTACGTTCCAACAAAGGTACAAAACTCTAGGAGTGGGTGCTCCAAGTATGGGAAGAAAACCTGTGTTCACAAAAGAACAAGAGACTGAAATTAGTACTAACGTCAAAGCACTAGCTAATATGTATTATGGAATTACTCCAATGCAGTTGCGTAAGTTGGTGTTTGAGTATGCTGAGAGACTACACATAGAAAACTCGTTTAACATGGAAAAACGTATGGCAGGCATAGACTGGTTGGGAGGATTTCTTAAAAGAAATCCATCGCTTTCAGTTAGAAAACCGGAGGCAACCAGCCTGAATAGAGTAAGAGGATTCAATAAGACTGAAGTAAATTTGTTTTTTACTAATCTTGAGAGAGTTATGTCGAAATACCAGTTTCCCCCccacaaaatatataatatggatGAAAGTGGCTTTACGACTGTACATGAAACCGGCAAAATTATAGGAATAAAAGGACAGAAAAGATTGGGTTCCATAACATCCGGAGAAAGGGGAAAAACCACTACCGTAATTTGTTGTATGAGCGCAGCTGGAAGTTACGTGCCTCCAATGTTTATTTACGCTCGGCAGCGAATGGTTCCAACACTGCAGGTTAATGGACCTCCAGGTGCAATATACAATTGCTCTGTAAATGGTTGGACGAACGAGAATCTTTTCACGATATGGCTCAAGCATTTCAATAATTATGCAACCCCAACAAAAGATGAACCCGCCCTACTTATTCTAGACAATCACGGAAGCCATATTACACTTGATGCTTACAATTTTTGCCGTGATAATAACATAACAATGCTTTCTTTGCCCCCTCATTCTTCTCACAGGCTACAGCCATTAGATGTTGTATTTTTTGGCCCACTTAAACGGGCCTATAATCGAGAATGTGACTTGCACATGAAAAGCAAACCCGGTGAACCCATTACGGTATATAAAATTGCTGAGTTATTCAATAAAGCATATTCAACTATAGCGACAATTTCAAAAGGGACGTCTGGATTTTCATCTACCGGCATCTTTCCTATAAACCCAAATGTATTTTCCGACGAAGATTTTCCACTTGAATCTGAAGCCGATGTTGAAGCAGTACAAGATATAGAAGTTAATCTCCTTGAGCCTACGAATCAAAATGAACCATCGTCAGATGAGGAAGACCCTACACTTAAAGCTCAACAACCACTTGAGCCTCAATATCAGCCAGACCAGCCAGTTTCCTTCCATGACCTTTCACCTCTCCCTGGGCCAAGCAAAATTTCAAAACTTACAAAGAGGAAACAACATTCTGTTATAATAACAGCGACCCCTGAAAAGATTGTCCTGGAAGAAAAAGAGGAAAAAAGGATTCTACGTCAACAAaggttaaaaattaataaaggtgTAAAAAGAAATGTATATGACATAGAATCAGCGGTAGCCAGTAGTTCTAAAAGAGGTAAGCCGGATGACAGTTCTTCCTCAGATTCTGAAGTTGGGGTTGATAAGGTTTGCCAGGATTCGTCTGACGATGACGTAATGCAGTTTGGTGAAGATGAAGAAGTTGGTGATGGCGAAAGAAAATTGAGCATTGATTCGGACGCGCCAATACAACCAAACGATTTTGTTCTTGTAATGCTTTGTAATGAAAAGTCAAAAAAAAAGTTCGCTGCACAAGTGACAGAATTACGAAAACAAGACCTAGTGGTAAAGTATATGCGGCAATACCGAGGtcagcaaaatgtttttatttttccgGATGTTGACGATGTCAGCTGTGTCACAAAACATGAAGTTATTGGGAAACTAAGCCACCCCGAAACGTTGAGATATGGAAAAATCAAATTTAACTAG
Protein Sequence
MKPLFCNDNLNLKLRQRMVRTYIWSVLLYGAEIWIIKAATINRLEAFEMWLHRRMLRIPWTAMQTNEMVLNRADTTRLLLNTVKCRKISYLGHVFRGERYRILQLIMMGKVEGRRGVGRRQASWLRNIREWTGIRSAEELFRLAQNRERLAQMPRNYKRKTEKASWTADDLSNAIDEVRNGIGQRQAARNHHIPFATFQQRYKTLGVGAPSMGRKPVFTKEQETEISTNVKALANMYYGITPMQLRKLVFEYAERLHIENSFNMEKRMAGIDWLGGFLKRNPSLSVRKPEATSLNRVRGFNKTEVNLFFTNLERVMSKYQFPPHKIYNMDESGFTTVHETGKIIGIKGQKRLGSITSGERGKTTTVICCMSAAGSYVPPMFIYARQRMVPTLQVNGPPGAIYNCSVNGWTNENLFTIWLKHFNNYATPTKDEPALLILDNHGSHITLDAYNFCRDNNITMLSLPPHSSHRLQPLDVVFFGPLKRAYNRECDLHMKSKPGEPITVYKIAELFNKAYSTIATISKGTSGFSSTGIFPINPNVFSDEDFPLESEADVEAVQDIEVNLLEPTNQNEPSSDEEDPTLKAQQPLEPQYQPDQPVSFHDLSPLPGPSKISKLTKRKQHSVIITATPEKIVLEEKEEKRILRQQRLKINKGVKRNVYDIESAVASSSKRGKPDDSSSSDSEVGVDKVCQDSSDDDVMQFGEDEEVGDGERKLSIDSDAPIQPNDFVLVMLCNEKSKKKFAAQVTELRKQDLVVKYMRQYRGQQNVFIFPDVDDVSCVTKHEVIGKLSHPETLRYGKIKFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01242405; iTF_01242406; iTF_01242407; iTF_01242439; iTF_01242408; iTF_01242409; iTF_01242410; iTF_01238667; iTF_01242411; iTF_01238668; iTF_01242412; iTF_01238669; iTF_01242420; iTF_01238677; iTF_01242423; iTF_01242845;
90% Identity
-
80% Identity
iTF_01242405;