Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: -
Assembly: GCA_963920685.1
Location: OY987331.1:117059111-117065375[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.4e-09 6.5e-07 32.0 0.0 5 38 1 34 1 40 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.4e-09	6.5e-07	32.0	0.0	5	38	1	34	1	40	0.90

Sequence Information

Coding Sequence: ATGCGGGAAGCTATACAAGctgttaaagaaaataaaatgagcTGGAAGATGGCTGCTAAAACTTATGATGTTCCTGCGACAACTTTACGGAGGAGGTTCAAAAAAGACGATGCTGCAAAAGGGGATTTAGGAGGTCGTAGATCAATACTGCCACGTGAAGTTGAAGAAGATCTGGTGAAACATGTTGTCGATATGGAGACAAGATTTTTATTGGAAGGACAACCATTAACAAGTTTACAAAAAGAGGAATGTGATAAGAAATTAGAAGAATATCTGAATCATTCTGAAGGCTGCTTTAACATTATATCTGATCCAAAATTATCGCAATATTGCTTCACGAGActtaagaataaaatattaaaattagaaaaccaGAAACTGGAATACATTGAATCTAATAAGACAGCAGATTTGCCACAACATGAAATTACATCAGATAAGACTTTATTCACACCCAAACAAGATCACAGTTTGTATCAAGAATTTATGTCCAATTCTAAAAATTGCGAAGAAATTGATTATTACAATGAAATTCTTTCAAGTACTTATCAAAAAGCAAAGATCATTGCTCTAACTGTGGAAGAGTGCCAAAGGAATATAAGATATATCAGAGAAAAACTAGACGTTATTCGTAATGCCGAATGTAGCAAACGAAAATTTGAGCTTGctAAGGAGCTAGAACATCAACAACACATTTATAGAAAAGGCCTTGTAGAATTAAAAGAACTAAAGCAAGAGACCATGCAGTTAGAAGCAGGGCTAAAAAAAGCAAAAACAAGAATGTTACAAAGGTTTAGTAAATGgactaataataaaattaattgtaaaaaaaatctcGAAGAGCACGAAAAGCAAAGGTTTAATTTCGGAGATAATACTAGTATGTGTGAAGGGTATTCCGCATGTCAATGTTATAGCGAATCCAATGATCAGTCAGATTTCTTTACGCCGAAAAATTATTACCCACAACCAAATGATTTAAATCTCGACTGTGATATGGCAAAATATGCCTGGAAACACCGCTGTGACTTTAAGGAACATTTCATGTCCGAGTCAGATAATGATTGTTGCATATCGAGTAAAAGAAGCACTGATAATAAACTTAACAGAAAGAAGTCTGCCACAACTTTTTCTCCTGATATTAAGACTGACTTAAAAAATGCTGGATACAAATGCGTATGTAACAATAATTGCCTTCAAATAAAAAGTGATGTAAATAAAGTCGTTTGTAATATTGACACTAGTGATAAAAATGAAAACACCAGGTGTACTTATCATGCATGTGTTAAACGATATTATGAAAATTGTAACTGTGCATACAATGATGAAGAAAGTTATTCGAATAGTATAATGCCAGTGTCTAAATATTTGGATCCTAATCAAGTTATTTACACTTATCCAAATTTGACAACTCAGCCAGACAATCCATGTTGTTGTGTTAACAGAGAAATATCTGAAAGTAGTAAGTTCGTATGTAAAAGTTCTCAATATTATCAAGGCCCCTCAGAACAATTAAAGTTTCACCAATATCCTTCACGTGGTAAAGATACATCTACGTTTATACgtgatattaataattataaagatTATAACCTAAACAGCATTTCATCTGTCTACAAAACTACTGGTAATTTTAGAGAAGACACAAAATGTATTTCATCTGTGACAGATTCTGATTCTGTAGATACTCAGCTCATTCCAAGTAAACTAAGCATAGGGAATAGTTCAGAAAAATCGATGCATAATGTCAGTTCGCCAACTTGTCAAGATATACTCACTACAAGTTGTAACaacaattttaatgataaaaatgtAAAGATAATTGTGGTAGGAAAAAAGGACATCAAGGACAGTAACATTAAAGAGAATAAAAGTATTTCCGAGACCAAAGCACCTAAGAAATTTGATATCTACCTTGAATCAGATACAAACGAATTTAGAAAATTTATGGAAAATATTTCGTTAACGGGAGACGAAGAGATAgataaagaaatttgtaatttttatagAATGAAAGTTTCCGtgtaa
Protein Sequence: MREAIQAVKENKMSWKMAAKTYDVPATTLRRRFKKDDAAKGDLGGRRSILPREVEEDLVKHVVDMETRFLLEGQPLTSLQKEECDKKLEEYLNHSEGCFNIISDPKLSQYCFTRLKNKILKLENQKLEYIESNKTADLPQHEITSDKTLFTPKQDHSLYQEFMSNSKNCEEIDYYNEILSSTYQKAKIIALTVEECQRNIRYIREKLDVIRNAECSKRKFELAKELEHQQHIYRKGLVELKELKQETMQLEAGLKKAKTRMLQRFSKWTNNKINCKKNLEEHEKQRFNFGDNTSMCEGYSACQCYSESNDQSDFFTPKNYYPQPNDLNLDCDMAKYAWKHRCDFKEHFMSESDNDCCISSKRSTDNKLNRKKSATTFSPDIKTDLKNAGYKCVCNNNCLQIKSDVNKVVCNIDTSDKNENTRCTYHACVKRYYENCNCAYNDEESYSNSIMPVSKYLDPNQVIYTYPNLTTQPDNPCCCVNREISESSKFVCKSSQYYQGPSEQLKFHQYPSRGKDTSTFIRDINNYKDYNLNSISSVYKTTGNFREDTKCISSVTDSDSVDTQLIPSKLSIGNSSEKSMHNVSSPTCQDILTTSCNNNFNDKNVKIIVVGKKDIKDSNIKENKSISETKAPKKFDIYLESDTNEFRKFMENISLTGDEEIDKEICNFYRMKVSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -