Pter020586.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987327.1:10339326-10341086[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-08 8.2e-07 31.7 0.0 3 34 9 40 7 49 0.93
Sequence Information
- Coding Sequence
- ATGGGTCGTAAAAAATGGAGAAAAGAAGACATGGTTCGTGCAATCGAAGCTGTGCGAAGTCACGAGATGGGATACAAAAAAGCGTCAGATACATTTAATGTTCCACGAACTACATTATTCCGTCTATCAACAAAGCGAGATGCAACACCAGCCCAGGCAGTTGAAACAAAATTAGGAAGATCCGCGGTTTTACCACAGCTGTTAGAGGAGAAATTGGTAGATTATCTGCTTCTGATGGAAAAAAAGTTTTATGGATTAACACGAAGTGATGTCAAAAGGATGGCCTATCAGCTGGTTATATTAAATAAACTACCAAACCCATTTTCCAAAGATAATGAAAGCGCTGGAAGAAAATGGTTGGATTTATTCCTGAGGCGACATAAGGACAGAATTTCTATCAGAAAGCCAACTGGGACATCCATCCATAGAGCCAAAGGCTTCAATAAAGAAAACGTTAcccacttttttaatattttggagGCAGAATTCGAAAAATACGAATACCCAGCGGATAGAGTATTCAACGTGGATGAGACTGGCCTATCTATTGTTCAGTCCAAAGTACAATATGTTCTTGCACTTAGAGGAACAAAGCAGGTAGGAGCCTTAACATCTGCAGAAAGAGGTTCCTTAGTTACGGCAGTCTTGTGTATGAGTGCGGGAGGATGTTTTGTTCCACCATTTCTAATCTTCCCTAGAAAAAATGCCAATGCTCTATTGGAAAAGGGTGCTCCTCCTGGATCAAAAATTGTTTGTCACTCTAGCGGGTGCATTCAAACCCACATTTTCACTCAGTGGttccaacattttattgaaaaGGTGAAACCATCACAAAACGACCCTGTGTTGCTAGTGTTAGACGGACACCATACTCATTGTCGCAATTTAGAAATGATAAACTTGGCAAGGCAGAATTTTGTTCAAATAGTGTGCTTGCCCCCTCATTCTACACACCACATGCAACCATTAGATAAAACGTTGATGGGACCTCTGAAAGCTCATTATAGTGAGGagttaagattatttttaagATCGAATCAAAGAGCAGTCACACATTTTGACATTGCTGAACTATTTGGAAAGGCTTACCTAAAGGTGCAAACTGGGGCAATTGCCGTTAACGGTTTTaaaaaaacaggaatatttccTCCAAATCGTCATGTTTTAACAGATAGCGATTTCCTTGCTGCAGAACAAGAAAATATCGAGGAACAACAAAATATTGAGGAAGGAGCCACAGCAGATGACCTAGAAGCTTCAATAAATTCAGTCTCTTCAAAAAAAGCCAAAACAGTGAAGCGTAAAGTGTTAGCGGAATCATCAGATGCCCTAAATCGACCATCCTCTAGTGGCCTTCATCTTCGTCAAGCAAATCCTTCAAAGAAGAAGGCGATCATTCAAGATTCCTCCTCAGAGTCAGAATCCGTTAATTTCAAAGACAATTCTTGTGAGGATGATGACATGGAGGACCTTGGAGTAGACAAACCACAGCAAGATAATGCTACTTGTTTCTATTGTAATGGACAGTTTTTGGAGGATAGAAAAGGAGAGAAGTGGATTGAATGTATTTTCTGCAAAGAGTGGTGTCATATTGACTGTTCGGGATGTGAAACTGATGTTTTCATCTGTGAGTATTGCAAAGACAATTAG
- Protein Sequence
- MGRKKWRKEDMVRAIEAVRSHEMGYKKASDTFNVPRTTLFRLSTKRDATPAQAVETKLGRSAVLPQLLEEKLVDYLLLMEKKFYGLTRSDVKRMAYQLVILNKLPNPFSKDNESAGRKWLDLFLRRHKDRISIRKPTGTSIHRAKGFNKENVTHFFNILEAEFEKYEYPADRVFNVDETGLSIVQSKVQYVLALRGTKQVGALTSAERGSLVTAVLCMSAGGCFVPPFLIFPRKNANALLEKGAPPGSKIVCHSSGCIQTHIFTQWFQHFIEKVKPSQNDPVLLVLDGHHTHCRNLEMINLARQNFVQIVCLPPHSTHHMQPLDKTLMGPLKAHYSEELRLFLRSNQRAVTHFDIAELFGKAYLKVQTGAIAVNGFKKTGIFPPNRHVLTDSDFLAAEQENIEEQQNIEEGATADDLEASINSVSSKKAKTVKRKVLAESSDALNRPSSSGLHLRQANPSKKKAIIQDSSSESESVNFKDNSCEDDDMEDLGVDKPQQDNATCFYCNGQFLEDRKGEKWIECIFCKEWCHIDCSGCETDVFICEYCKDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242218;
- 90% Identity
- iTF_01242353; iTF_01242918; iTF_01242919; iTF_01242920; iTF_01242352; iTF_01242354; iTF_01242355; iTF_01242356; iTF_01242357; iTF_01242358;
- 80% Identity
- -