Pter073871.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987330.1:85562590-85564662[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-09 2.8e-07 33.1 0.0 1 40 15 53 15 56 0.95
Sequence Information
- Coding Sequence
- ATGCCACGTCACAAAAAAGCAAAAAGAAAAATTGGAGCACACACGGAGGAGGAAATGAGAGCTGCGGTAGAAATGGTCGAAAAGGGTATAAGCGGACGTCAAGCAGCTAAGCAAAATAATATCCCCTATCCCACTCTTCGTCGTTATGTACAAAAAAGGGCCCAGTTTGGTATAATCATTCCTTTAGTTCCTAATTATGAAGTAAATCGAGTATTTACTTTGGCACAAGAAAACATGTTGGTTGATTATTATAAGATGTGTGCATTTAAGTTCTATGGATTGACTACCAAAGATTGCAGACAAGTAGCTTATGACATGGCAAGGCTAAACAACATTAAAATGCCAGAATCCTGGAAAAAAAACTCCATAGCAGGCTTGGAATGGTTCCGATGTTTTCGAAACAGGCATCAAGATATTTCGCTGAGAAAACCAGAATGTTGTAGCCTTGCAAGGGCTACAGCATTCAACCGAGAAAacgtcaatattttttttgataatttaaccGATACTTTGAAGAGAGACCCAAGATTCGCCGATGGAACGCGTATTTACAATTTAGACGAAACTGGAACTACGACAGTCCAGAAGCCCCAAAAGGTCATTGCTCCAACTGGATTATCGAACGTCGGGAAGGTGACTAGTGGCGAGAAAGGAACCTTGGTCACAACATGTTGCATGGTAAGTGCAACTGGGCATGCATTGCCTCCAGCTATTGTTTTTCCCAGGAAAAATTTTAGAGATATAATGCTACATGGATCTCCTCCCGGATCTTTAGGACTGGCAGCCCCTACTGGATGGATGAACTCTAATCTATTTATTGAGGTAATGAAACACTTTATTGCACACACCTCTTCAAAACCAGAAAATCCATCCTTGCTAATCATGGATAATCATGAATCTCACCTGTCGATAGAAGCTTTAGATTTAGCAAAAAGTTCTGGAGTTACAATACTTACTCTGCATCCACACACTTCAGCCAAATTACAGCCATTGGATGTGGGATTACTAAGTCCGTTTAAAACATACTACTATTCCGCTCTGGAGTCATGGATGCTTCGTTTTCCTGGGAAACCTGTGACTATATATCAAATTGCTGAATTTATCGGTTATGCGTATCCAAGGGCAATGACTCCTGTAAATGTAGCTGCAGCCTTTTCCAAGTGTGGAATTTTTCGGTTTAATAGGGACATATTTTCTGACATAGACTATTTGCCGAGCAGTGTGACAGATCGCCCTCTTCCTGACGATGAAACCGAAAATTATCAACCTGGAACAAAAGGATCTGCAGAAAATAATACTTCCATTGAAATTCACTCTTCCCCACCAGGCGTTATCGCCGAGGACCCTCAACCAGGACCAAGTGGAACCTCAAAAAATGACAATCATTCCGAGCCTACATGTAAAACATTTATAACGCCAGAAATATTTCGCCCGCCGTTGAAGGCAGGTCCTCGTACTGATAAGAGAAAACgtagaaaacttaaaaaaagcATAATAGCGACCGATACACCAGAAAAAGATGCCATAGCTATTGAACGAGCATGCACAAAAGCCAAACAAGATAAATGCAAAAGGCAGGTTTTGCAAGATTCGACAGGACCAAATAAGGGCACATTTAAGATCTTAAAAATGAGGCGCAGGAAGAAATCTGACTCAGAAACAGATGAATCTGAAGAAGAAGTAATGAGTAGCAATAGCTCTTCTGGCGGGGAATGGAGTAAAGAACCGGAAGATGATTACTTAATTTTGGATGAAAATTTTGCCAATTTGCCACGAAATCCCCAGGACGGTGACTATGTTCTGGTGCTATTTACAACAAAAAAACTCTCGATTTATTATATAGCAAAAGTTCTAAAGCAGAACGATAATGATGATGAAGATTATTCTGTCTCCTTTTTAAAAGTGAAACAAACAGGCAACCAGAACTTCGTGTTTCCTACAGAACCGGACTTGGCAGATGTCAGAAAGTCTGATATTAAGTTCATTCTCCCTCCACCCCAAATCATGGGCACCAAAAGAAGACAAGAAACATTCACTTTTAAAGTCAACTTGTCTTTATTACATATTCGCTAA
- Protein Sequence
- MPRHKKAKRKIGAHTEEEMRAAVEMVEKGISGRQAAKQNNIPYPTLRRYVQKRAQFGIIIPLVPNYEVNRVFTLAQENMLVDYYKMCAFKFYGLTTKDCRQVAYDMARLNNIKMPESWKKNSIAGLEWFRCFRNRHQDISLRKPECCSLARATAFNRENVNIFFDNLTDTLKRDPRFADGTRIYNLDETGTTTVQKPQKVIAPTGLSNVGKVTSGEKGTLVTTCCMVSATGHALPPAIVFPRKNFRDIMLHGSPPGSLGLAAPTGWMNSNLFIEVMKHFIAHTSSKPENPSLLIMDNHESHLSIEALDLAKSSGVTILTLHPHTSAKLQPLDVGLLSPFKTYYYSALESWMLRFPGKPVTIYQIAEFIGYAYPRAMTPVNVAAAFSKCGIFRFNRDIFSDIDYLPSSVTDRPLPDDETENYQPGTKGSAENNTSIEIHSSPPGVIAEDPQPGPSGTSKNDNHSEPTCKTFITPEIFRPPLKAGPRTDKRKRRKLKKSIIATDTPEKDAIAIERACTKAKQDKCKRQVLQDSTGPNKGTFKILKMRRRKKSDSETDESEEEVMSSNSSSGGEWSKEPEDDYLILDENFANLPRNPQDGDYVLVLFTTKKLSIYYIAKVLKQNDNDDEDYSVSFLKVKQTGNQNFVFPTEPDLADVRKSDIKFILPPPQIMGTKRRQETFTFKVNLSLLHIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242219; iTF_01242642; iTF_01240160; iTF_01238597; iTF_01238598; iTF_01238599; iTF_01238600; iTF_01238601; iTF_01238602; iTF_01238604; iTF_01238607; iTF_01238613; iTF_01240155; iTF_01240156; iTF_01240157; iTF_01240158; iTF_01240159;
- 90% Identity
- iTF_01242642;
- 80% Identity
- -