Pter081233.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polydrusus tereticollis
Gene Symbol
-
Assembly
GCA_963920685.1
Location
OY987330.1:111709609-111712269[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-09 3.8e-07 32.7 0.1 1 41 12 52 12 55 0.94

Sequence Information

Coding Sequence
ATGCCTCAAGAAAAgcgaacattttttaaatattctgagGAGGCTCTGGCTCTGGCTCTAAGATCAATAAGAGAACAAAATTTAGGCACACGGGCAGCAAGTAAGGCGTTTGGGGTACCAAGAGCAACTCTACAAGACAGAATAAAAGGAAGGGTACGAGAAGGTCCCAGACAAATGGGTAGGGACACAGTTCTGACAAAAGATGAAGAATCAAAAATAGTGAAATGGTTGATAGATTTGTGTAAATGTGGCTTTCCTCAGAAAAAGTCGGATCTTTTAGATACTGTAGAAAACATTGTTACTGCTGACAAGAGACAGACTCCATTCACAAATCATCGTCCAGGGGAAAAGTGgtataaatgttttttaaaacgaCATCCAGAATTATCACTCCGAGAACCTGAAGGATTGACCAAAGGAAGAGCTGTTATAACAGAAGAATACATAAGGAAGTGGTTTTCTGATTTAAAAGCGTATTTGGAAGAAACAGATAACTTAGATATTATGTCTGATCCAGAGAGAATACTTAATGGTGACGAAAGTGGCTTCAATTTATGCCCTAAAACAGGAAAAATTTTAGGTCCCAAAGGTGCCAAAAATATTTTGGGGATCAAGAGAGGAAATGATAGAGAAAATATTACCACACTTCTTGTCTTCACTGCCAGTGGCAAAACTGCAGTGCCATGTGTGGTCTTCAAGTATGTTCGAATTCCTAAGGCAATTATAGGCAGCAGTGATCCCTTGTGGCATATTACAAAATCAGATTCGGGATGGATGAAAAGTGATGTTTTCTTTGAATATGTATCCAGTCAGTTGCTTCCTTGGTTGCAATCACAAAATATCAAGTTTCCAGTAATTTTTGTCGTTGACGGCCATAAGTCGCATCTAACTATGGAACTTAGCCAATTCTGTGAGAGGAATGGTATTATATTGTACAGCCTGCCGCCCAATACTACCCATATGATGCAGCCAGCAGATGTTGCTGTTTTTAAACCCTTGAAAAGTGAATGGAAGAAAGTAACTCGTCAATGGCTAAGTAAACCTGAAAACATTCACTCGGCGGTTACCAAAACAACGTTTTGCCCACTCCTAAAGACTGTTCTAGAAAAGCCTTCTCTGCCTGAatacatcaaaaaaggctttaaGAAATGCGGACTCTTCCCATTCGACCCCGACGTAGTGGACTACACGAaatgtgttcaaaattatttgGAATCAGTGGTAAATAATGAGTTAAAAGAGGATCCAATTATTACAGACGAAGAAATTGATATTGCCAAAAAAGTATTGTTGGCTAAGTTCAAAGATCGATTGGGGAAAAATTTGATCATCGATGATTTGCTGCGTCAACTCGAGAGTTTTAAAACTGTTCCAGGTTTTCGTGAAGAGATAGAAGAAAATGTAATACATCATGAACCACCTGAGAATGAGCCTTGGGCAAATAATGAAGATCCTGTTCACCACTTTGAAAATCCAGAAGACACTGATGAATGGTTACCTATTGATGATATTCCAATCATATTTGTTAATGACAATGATAGTGTCTCCGAACTTATGAATGATGAGGCCCATGGAAGTGCTGATGAAAATAATGTGCAAAAACTTCTGACAGATGCAGATGAAGGTGTCGGaaaaaaagttgaaataaatGAGCAAATGGCAGAGGCAGATATACATGAAGTCAATATACAAGAGCCTGAACTTATGAGTGATGAGGCCCATGGAAGTGCTGATGAAAATAATGTGCAAAAACTTCTGACAGGTGCAGATGAAGGTGTCGGaaaaaaagttgaaataaatGAGCAAATGGCAGAGGCAGATATACATGAAGTCAATATACAAGAGCCTGAACTTATGAATGATGAGGCCCATGGAAGTGCTGATGAAAATAATGTGCAAAAACTTCTGACAGGTGCAGATGAAGGTGTCGGaaaaaaagttgaaataaatGAGCAAATGGCAGAGGCAGATATACATGAAGTCAATATACAAGAGCCTGAACTTATGAATGATGAGGCCCATGGAAGTGCTGATGAAAATAATGTGCAAAAACTTCTGACAGATGCAGATGAAGGTGTCGGaaaaaaagttgaaataaatGAGCAAATGGCAGAGGCAGATATACATGAAGTCAATATACAAGAGCCCGAACTTATGAGTAATGAGGCCACACTGCAAGAAAAAACCTTTGACGAACCTTCTCAATTGCAACAGAGTGATTCCCATGCAGTAAATCCATCAGATAGACCTGTCACTAcacagaaaattaatatattaCAAGACACCAAATTAAATATTCCAATTGAGAAGTTTTTATTTTATCCCACACCCATAAcatcaagaaaaagaagaaatgtGGATCCTCAACCAGCAGCTATCTCTTCCCCAAACTACAGGGCATATTTGGAAGAAAGAAGTGGCAGAACACAAAAAAAAGTAAAGAAATCTAAAATTAAGAATACCGAGATAAATGCTGTGAAAAAATCTAAGGAAAGGTGCTGGGGATGTAAAGAAGAGTTGGATAGTGATGTGGACGAAGGTGATGAGGAGCATGTTGGATGTGACAACTGTCCCAAATGGTACCACCTAAAATGTACCGGGGTACGTAATACCTCAATTTCAGAGCTGAAACAAGAATACTTCAAATATGATGTTTGCTAG
Protein Sequence
MPQEKRTFFKYSEEALALALRSIREQNLGTRAASKAFGVPRATLQDRIKGRVREGPRQMGRDTVLTKDEESKIVKWLIDLCKCGFPQKKSDLLDTVENIVTADKRQTPFTNHRPGEKWYKCFLKRHPELSLREPEGLTKGRAVITEEYIRKWFSDLKAYLEETDNLDIMSDPERILNGDESGFNLCPKTGKILGPKGAKNILGIKRGNDRENITTLLVFTASGKTAVPCVVFKYVRIPKAIIGSSDPLWHITKSDSGWMKSDVFFEYVSSQLLPWLQSQNIKFPVIFVVDGHKSHLTMELSQFCERNGIILYSLPPNTTHMMQPADVAVFKPLKSEWKKVTRQWLSKPENIHSAVTKTTFCPLLKTVLEKPSLPEYIKKGFKKCGLFPFDPDVVDYTKCVQNYLESVVNNELKEDPIITDEEIDIAKKVLLAKFKDRLGKNLIIDDLLRQLESFKTVPGFREEIEENVIHHEPPENEPWANNEDPVHHFENPEDTDEWLPIDDIPIIFVNDNDSVSELMNDEAHGSADENNVQKLLTDADEGVGKKVEINEQMAEADIHEVNIQEPELMSDEAHGSADENNVQKLLTGADEGVGKKVEINEQMAEADIHEVNIQEPELMNDEAHGSADENNVQKLLTGADEGVGKKVEINEQMAEADIHEVNIQEPELMNDEAHGSADENNVQKLLTDADEGVGKKVEINEQMAEADIHEVNIQEPELMSNEATLQEKTFDEPSQLQQSDSHAVNPSDRPVTTQKINILQDTKLNIPIEKFLFYPTPITSRKRRNVDPQPAAISSPNYRAYLEERSGRTQKKVKKSKIKNTEINAVKKSKERCWGCKEELDSDVDEGDEEHVGCDNCPKWYHLKCTGVRNTSISELKQEYFKYDVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01242261;
90% Identity
iTF_01242249;
80% Identity
-