Basic Information

Insect: Polydrusus tereticollis
Gene Symbol: clz9
Assembly: GCA_963920685.1
Location: OY987336.1:13908019-13937790[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.52 40 7.1 0.0 22 35 6 20 4 23 0.90

2 2 1.3e-06 9.7e-05 25.0 0.0 1 35 771 805 771 807 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.52	40	7.1	0.0	22	35	6	20	4	23	0.90
2	2	1.3e-06	9.7e-05	25.0	0.0	1	35	771	805	771	807	0.94

Sequence Information

Coding Sequence: ATGCCAAAGAAAACTGCagcaaaaatgtataatatccCAAGAGCCACACTTCAATTTCGCCTTGGATCAAAATTTTCGAAACCAGAATTAGGTCAAAACACTTACCTTACCAAAAATGAAGAAGCCGAATTAGTCCAGTGGATCATAGAGAGCCACAGAAAAGGTTTCCCGAAACGAAAACTTGATATTCAACTTTCGTTTTGCCCTAAGCTTGGTAAAATATTAGCTCCAGTGGGAACAAAAAATGCATATGAGGTTGATCTTGGAGGAGCAAAACAGAATTTGACAGTTTTGTTCACTTTTGCAGCTTCTGGAGAAACAGTTCAACCCTTTATAGTCTACCCAAATAAAAGGCTGCCAAAATCGGTGGTAACGAATATTCCCGGAGATTGGGGAATAGGGCTGAGTGAAAAGGGTTGGATGAATCCAGATTTGTTTTTAGAGTACATAAAAACAATCCTTTACCCGAATTTAAAGTCAAAAGATGTTAAGTTTCCCATTATCCTTTTTTTAGATGGGCACAAGAGTCATCTTACATGTCAACTTAGCCAGCTATGTACCGAATTATCCATCATATTGGTTTGTTTATACCCAAACTCCACAAGAATATTACAGCCAGCAGATGTTTCATGCTTCCGCCCTCTAAAGATCTTGTGGCAAAAAGCAGTAGTTAACTGGCGTAAAAGTAATCCCTACTGCAAATTGGGAAAGGAACATTTTGCCCCAATTTTAAAAGAATCCTTACCTCACCTAAAAAGCCAAACCATTATTAACGGATTTAGAGCATGTGGATTGCAACCCTGGAATTCCAATGCAATTGACTTTTCAAAGTGTTTGGGAAAACAAAGTAGAGACAATGTTTTAGAAGACACTACACAATCCAGAGATAGTTTAGAAGAAGAACCTGGTTATGTTAAAAAGGAAATAAATTTGGAAATGTTTAATAACTTAGTTGGAAAGGAGCTGGTTCAACAGTTACAATTAAAAGAAATCCCTTCATGTACCCTCGATTTTTGTAAAAGCTATGAGGGCctaaaaaagatatttaattttttaaatgtttttgaaaCTGGTGTCCATAATATGCAAGATGATATGAACGACTTAATGGAATCTGATCAGGATCAGCATAAGCAGAACGAAAGTTCTGATCATCAGAATGATATCTCATTCTTTACTAATGATGACTTTGAATCAATGCCTATTATTTTTGTTGGTGATGATGGAAATTGccgtaataatactaataataattcaGTTACAAATCAAAACAGAGAcgggaacaaaattattattcagCAGAATATTGTACTCAATGACAATTCACAACGTACTAAGTTCAATCCTGCTTGGAATAAAGAGGAAACCATGACAACAATGACAAATAAGGAAAATGAGGAAACAGAGTATGAGGTAAAAATAAGGACTGATGATACCGATGCTAAAAGTTTAAACACTGGAGAAGAATatcataaaactaaaaataataaaaatacagaagTAGATTTTGAGATACAGCTTGAAAGTGAAAATGTCAATAATAAGAAAGAAGTAGATAAAATCCCAGGTACAGAACTTATAGAGAAATTTCAACTAGGAAAGGAAAGTCCCAAAATAAAACTATATTTACCACATACAAAAACTCCACAAAGAGCAGGAAAAAGACAAACTGAAAGGATTCCATTTGTGATTACTTCTAcacaatacaaaaaaattatcgaAGAGAAAGAAAAACTTAAGGaggaaaaggaaaaaaagaagtTGGAAACTAAACAAAAACGATTAACAAAATTGtcacaaaaagaaacaaaaactGGTCTCAATCAAAGTAACAAGAGAAATAAGACTATAAGCATCCCAAATGAACCAAATTTGATAAAGCCTTTAAAGACTGATGTTAAAAGCTTAAAAGAATCTCATGTGAGGAATTTGTTTCGAGAGTCTCAAAAAGAAAAGTCAAATAACTTCATATATAGGGAAGAATCACACTTTAAACATTTATCTCAAGATTCGCATGTTAAGGAATCCCGCGTTAAAAATTTGTTCAAAGATTCTCCCACTAAGACGCCAGCAGAATCCGACAGTTTAAGAATGAACATCTTCGACGAAGAAACAAGTTGGCGGATATATGGTTCAACAATGAATGCTTGCGAAGAGGAATCACCCCTAACTACATCTCCATTTTCACTAAGAACAATTCCACATCGGCTAAGAGAGCTATCCAAATTGCTAAAACAACATGGATTAGACACGAAgataaacaaaatgCCTAAAATTTCATCTAATGAAACGAAATATACTAAAAAGTATACGGAAGAAAATGTCAATCGTGCTCTTAATGCAATTAAAGATGGTATGAGCCAACGAGATGCTGCCAAAGAATTTATGGTTCCCAGATCAACAATTTATTTTCGAAGTAGTGACAAGTTTAAAAAGACCTCGCATGGTCCGAATCCATACTTATCTAGAGAAGAGGAAGTTCTTTTAAGTGACTGGGTATTCCATTGTCAAGAGAAAGGATTTCCTGTGCGAGTAGAAGATCTCCAAGAATCCGTCAAAATGTATTTGGACAAAAATCCGAGAGAAACTCCATTTCCTAATAATAAGCCTGGCCGAGGTTGGATCAATGGGTTTTTAAAACGCCACAATGAAATATCATTAAGAACTCCCGAAGGTGTAACAGCTGCTAGCTCTAATGTAAGCGAAAGGGATATAAAGAATTGGTTCGAGAAGATAGGCCAATACTTTCATAAAAAGGGGTGGGAGGATATTTTACAAGATCCTTCCAGAATTTACAACGGGGATGAAACCTGTTTCTATCTTTGCCCGAAGAATAAAAAGGTGTTAGCTGTCAAGGGCGAAAAAAACGTATACGAGGTTGAAAATAACCCTAAAGTTAACCTTACAGTTATGTTTACCTTCGCGGCGACGGGGGATATCACACCACCTATGATTATATATTCGTACAAGCGACTTCCCAATGATGTTCTGGCCTCTGTTCCTAAAGACTGGGGTATTGGTTTAACTGATAATGGATGGATGGACAACAAGAACTTTTATGAGTATATAGGTAATAtatttagaaaataccttctAGAAAAGCAAATTAAACTTCCAGTAGTTCTCTACGTAGATGGTCATAAAACGCATCTTACCATGCAAACAAGCCAATTGTGTTTAGACGCTGGGATAATATTGGTATCCCTGTATCCAAATTCTACAAGATTAATGCAGCCGGCCGACGTAGCAGCATTTCGCCCTCTAAAGAGCTACTGGGCTAAATCTGTTCTAAAATTTAAGAGGGAAAATccaaaaaaggttttaaataagGCATGTGGTCTATTTCCATGGGAACCAGCCGCCCTTGATTATTCTAAGTGTCTTGGAAAAAATCGTAAAGTTATAGAACCAGCAATTATCGAGAATGCAATAATTCATCCAGACACAAGCATTTCATATGAACAGTTTGAAAAGATAGTTGGACGGGACCGAATAATACAACTACAAACATCTGATGACAGTAGGGATAATTTAACTGATGAACTAAAAATTCTCCTTAAAATATATAACGAATTTTCCTTATCGAAATTTCATGAAATTGAAGTCCAAGGGCCAGAAAATGAAACGCAACAAATTTATTCCATTCACGATGAAGTGCCAGTAATAGTTTGTGATTCAAATATAATACAAAGTAATCTGGAAAATTATGACGGCCCATTAAATGAAGTCAACTTACCTGATAAAAATATCGTTGTGACTGCTGAACCTAATAAAACACTGATTGATGAAGCAGATTCTTGTGTAAATACCTCTGATTCGCTAAAATCCTTTTTAGTATGGCATGATACTCCCGAAAGAAAAGGGAAGAAAAAAACAGAAAGAGTTCCGTTTGTGTTAACTTCTTCAGATCGACTAACTATGGAAAGGCAGAAGAAGGAGAAAAAGGCAGAAGAAGAAAGATTGAAAAAGGAACGAATAAATGAAAGAGCTCGAAAGAAGGAAATAAAAGAAAACGAGATAAAGATGAAAAAAAAGAACcaaggaaaaaatattaaaacgtcaaccaaacctttaaataatatggGGTCCGCCGTTTCTTTACAAAGCCTAAAAAAAGCTAATGCTCCTGATTCTGTTAAAGTCAGCTTGGACAATGAAAATTATGAGGATACTGACAAAATAGAATTAAAATCTACAATTTCCAAAAAGGGAGTTAAATtgcatatccccaaagaaaacaaGGAATTAAAACCTAGTGCTGAAGCATGTCTGAAGTTAGAAGTTAAAGCTATCTCCATTATTTCTTCTGTAGATGTGGCAAAGAGGCGGTTATTTGATAATAGTCCTGGGAATCTTGGTCACGTGAGTATGAGTAAGAGACAAGGAAGTATTTTGGATTTCCTGAGAGGGAAAAAACATAAAACAAATGGCCAAAGTCAACGGGAGCAACCATCAAGTAGTGATCTGACCATTCAGACAAATATAGAGAAGAAAGTTTTAGGAAATTCGGAGCTGGatttgGTGACATCGGCGTGCGGGGACCAATGCGAAATTTTAGATATTCAGGAAGTTGATTGTGACCAAATTCAAAAAGAACAGGTTAAAATACATAAAGAAAATAACGTAGACGTAGAGAAAGCAGCGACAAGTGCTAATGCTAATATTCAGAAATGTATAGTATCCCAAAACTTGGATCTGGGGAAATActtaaataaaattgaaacttTATCGGATTCCCAGCGTGCTTCggtcattaaaaataaatgggaattgTCAGAAAATTTTGTTTATCCTTACAGTATTCACGTAAAGAAAgataaatcaattaaatgttTTTTGTCAAATAAGCATTTTGGAAAATTTAATTGGCTCGTTTACTCAGAAACTTTAAAAGGACTTCTTTGCAAACACTGCGTGTTGTTTGCAGGTCAAGGTGGCAGCATAAATCACCAAAGTACTTTGGGTAAATTAGTAAAAATTTCTCTTAATAAGTATTCGAAATTAACCGGAAAGGACGGAGATCTAGAGCACCATGAAAAAACTAAATACCACCAAGAAGCAGTACAAAAATCTGCAATTTTCTTAGATACACTAAAACGGCCCGAGTCTTCTATTCTTAATCAAATagataaaaaaagaaaagaacaagtTTTGGAAAACCGAAATAGACTTAAACCTATTGTCGAAACTGTACTCCTCCTTGGCAGTCAAAATATCCCCTTTCGAGGACATAGAGATGATGGGTTTTTTGAGGAAAGCTTTAAAGAATCCTCTGCAAATCTCGGAaattttaaagcaattttatcTTACCGGGCATTGGGAGATGAAAATCTAAATTCACAATTAAAAACCACTTCGAGCAAGGCAACATATATAAGCAAGACGACCCAAAATGAAATAATACGATGCATAGAGTTAGAAATTTTGAACCAAATTCTAGACAGGgtgaaacaaaataaattttacagcATTATATTTGATGAAACTACGGATATAGTTGGTCTTAGCCAACTCTCTTTAGTTATAAGATATGTTTATAATTCGGAAATACACGAAGATTTTTTGGGGTTTATAGACTGCCACGAAAAACATTTAAAAGAGGAAAAAGAAGTTGAACCCATTTTATCAGGAGAAAAGCTGGCGGAAATAgtccttaataaattaattgaGTTTTCTTTAGACAAAGATTTTTGCGTGGGCATTTCAACAGATGGTTGTGCGGTTATGTTGAGTGAAAGAAAAGGCGCCGTATTTAAATTgaaacaaactttaaaaaatgcAACAAAATCAGAGTGTTTTAACCACGCATTAAATTTGTCAATTTCTAAAACCAGCAAAGTGCCAGCAGTTCGAAACGCTCTTGGAACAATGAAAGAGGCAATTTCTTATTTCGGACAGTCCTCTAAGAGGTTGATTGTATTAAAGAAGTTGTGCCCTTCAAAATTAATCAAAATGTGTGAAACACGTTGGGTAGAGCGGCACAAATCAATATTTAGATTTTGTTCGGCATTGCCTTCCATTATTGGAGCTTTAGAAACCATATCCAACTGGCAGGATAGAGAGGCATCTAcaaaagcaaacattttaaagACATCACTTTTAAACAGTCAGTTTATTGTAACTCTTTTTTGTCTTTCAGATGTTTTATCTCTAACCCTTAATATAAGCCAAATATTTCAAACGAAAAGCCTTAATAGAGCTTCTGCTAAAAATATGCTAAACAATGTTATTAGCCAACTAAAGGAGAAACGACTAAACGCCGCTGAACatttttcaaatgtttttgaAAAGATTACGGAATTGCACAATGCGGTAGCCATCACTCTAACTATGCCACGAAGAGCAAATATGCAAATTCATAGGGTTAACGTACCTGCTGACAATTCTGAAGATTATTACAGAATTTCGACATATATACCGATTATAGATCATATTATAGAAGACACTCAGTTTAGATTTGATGAGGATTTTTTTTCCACTTTTGACCTCAAAGTTCTAGAAAATCTACACACTTCAAGACCCAAGGACGACTCAGTCAATAATTTGTGCTCTCTTCTTGCGCCATTTGTGGATCCAGAGATGTTGTTTCAGCGTTTAAGAGCAGAAACTGACCTGTGGAGATTATCAAATGCAGAGATTAATCAAGATTCTCCCATTGAATTTTTGTTTAGGAAATGTGACGAAAGTAAAGAGTTTTTTCCTCTTCTGCTTAGATTATTCATCCTGTTATTTACTCTTCCAGCAAGTGTTGCATCTTGCGAAAGGTCATTTTCTGCTCTTAAGCGTTTAAAATCTTGGACCAGAAGCAATATGGCTCAAGAAAGACTGTCTGGTTTGGCATTGATGCACATTAACCGCGATATTGTCATCGATGTCGAAAGTGTTATTAATAGACATGTGCTACAGGAAAAAAATCTAGCTTTAGACAGGATTAGCACGCCTACCGTACAGTTTGCTCCCGTACctgcaaattttgattattcTGCTAGTAATAGTAGTGGCAGTAGTAATAACTGCAGTGGTAATAATTCCATTGAAGCCGAAGCAAACTTACAAGCAGCTGAGGCACTGGGCCTTGATGATTCCTTAAATCCGAGCTTAAATCTCAGTAGTTCTGGTGAAAAAAAGATTTATAAGTACCAAGTTCTATATGGCAATCAAAGGCTTTCTACTTCTTTGTTTTCACAAGCAACTGATAAAATTTGTAAAGTGTTCTGTAATGAGAGTAAAGAAATTTATTTCATTCCATACAAACCAAAAACTGGTTACCAGCCCAAAGAATCGGCACGAGGAAAGTTATGGTCTCGTTATGTGAATGTTAAATCAGCTTTAAAACAAGCTAATGCAATTAATATTCCAAACACTAATTATCCTGCAGaatacATAGACGAAGCTGAGGATACTCACGCATATGAGGTTCTAAAATTCCTGCTAGAACCGCAAACGAAGATTCTTTAA
Protein Sequence: MPKKTAAKMYNIPRATLQFRLGSKFSKPELGQNTYLTKNEEAELVQWIIESHRKGFPKRKLDIQLSFCPKLGKILAPVGTKNAYEVDLGGAKQNLTVLFTFAASGETVQPFIVYPNKRLPKSVVTNIPGDWGIGLSEKGWMNPDLFLEYIKTILYPNLKSKDVKFPIILFLDGHKSHLTCQLSQLCTELSIILVCLYPNSTRILQPADVSCFRPLKILWQKAVVNWRKSNPYCKLGKEHFAPILKESLPHLKSQTIINGFRACGLQPWNSNAIDFSKCLGKQSRDNVLEDTTQSRDSLEEEPGYVKKEINLEMFNNLVGKELVQQLQLKEIPSCTLDFCKSYEGLKKIFNFLNVFETGVHNMQDDMNDLMESDQDQHKQNESSDHQNDISFFTNDDFESMPIIFVGDDGNCRNNTNNNSVTNQNRDGNKIIIQQNIVLNDNSQRTKFNPAWNKEETMTTMTNKENEETEYEVKIRTDDTDAKSLNTGEEYHKTKNNKNTEVDFEIQLESENVNNKKEVDKIPGTELIEKFQLGKESPKIKLYLPHTKTPQRAGKRQTERIPFVITSTQYKKIIEEKEKLKEEKEKKKLETKQKRLTKLSQKETKTGLNQSNKRNKTISIPNEPNLIKPLKTDVKSLKESHVRNLFRESQKEKSNNFIYREESHFKHLSQDSHVKESRVKNLFKDSPTKTPAESDSLRMNIFDEETSWRIYGSTMNACEEESPLTTSPFSLRTIPHRLRELSKLLKQHGLDTKINKMPKISSNETKYTKKYTEENVNRALNAIKDGMSQRDAAKEFMVPRSTIYFRSSDKFKKTSHGPNPYLSREEEVLLSDWVFHCQEKGFPVRVEDLQESVKMYLDKNPRETPFPNNKPGRGWINGFLKRHNEISLRTPEGVTAASSNVSERDIKNWFEKIGQYFHKKGWEDILQDPSRIYNGDETCFYLCPKNKKVLAVKGEKNVYEVENNPKVNLTVMFTFAATGDITPPMIIYSYKRLPNDVLASVPKDWGIGLTDNGWMDNKNFYEYIGNIFRKYLLEKQIKLPVVLYVDGHKTHLTMQTSQLCLDAGIILVSLYPNSTRLMQPADVAAFRPLKSYWAKSVLKFKRENPKKVLNKACGLFPWEPAALDYSKCLGKNRKVIEPAIIENAIIHPDTSISYEQFEKIVGRDRIIQLQTSDDSRDNLTDELKILLKIYNEFSLSKFHEIEVQGPENETQQIYSIHDEVPVIVCDSNIIQSNLENYDGPLNEVNLPDKNIVVTAEPNKTLIDEADSCVNTSDSLKSFLVWHDTPERKGKKKTERVPFVLTSSDRLTMERQKKEKKAEEERLKKERINERARKKEIKENEIKMKKKNQGKNIKTSTKPLNNMGSAVSLQSLKKANAPDSVKVSLDNENYEDTDKIELKSTISKKGVKLHIPKENKELKPSAEACLKLEVKAISIISSVDVAKRRLFDNSPGNLGHVSMSKRQGSILDFLRGKKHKTNGQSQREQPSSSDLTIQTNIEKKVLGNSELDLVTSACGDQCEILDIQEVDCDQIQKEQVKIHKENNVDVEKAATSANANIQKCIVSQNLDLGKYLNKIETLSDSQRASVIKNKWELSENFVYPYSIHVKKDKSIKCFLSNKHFGKFNWLVYSETLKGLLCKHCVLFAGQGGSINHQSTLGKLVKISLNKYSKLTGKDGDLEHHEKTKYHQEAVQKSAIFLDTLKRPESSILNQIDKKRKEQVLENRNRLKPIVETVLLLGSQNIPFRGHRDDGFFEESFKESSANLGNFKAILSYRALGDENLNSQLKTTSSKATYISKTTQNEIIRCIELEILNQILDRVKQNKFYSIIFDETTDIVGLSQLSLVIRYVYNSEIHEDFLGFIDCHEKHLKEEKEVEPILSGEKLAEIVLNKLIEFSLDKDFCVGISTDGCAVMLSERKGAVFKLKQTLKNATKSECFNHALNLSISKTSKVPAVRNALGTMKEAISYFGQSSKRLIVLKKLCPSKLIKMCETRWVERHKSIFRFCSALPSIIGALETISNWQDREASTKANILKTSLLNSQFIVTLFCLSDVLSLTLNISQIFQTKSLNRASAKNMLNNVISQLKEKRLNAAEHFSNVFEKITELHNAVAITLTMPRRANMQIHRVNVPADNSEDYYRISTYIPIIDHIIEDTQFRFDEDFFSTFDLKVLENLHTSRPKDDSVNNLCSLLAPFVDPEMLFQRLRAETDLWRLSNAEINQDSPIEFLFRKCDESKEFFPLLLRLFILLFTLPASVASCERSFSALKRLKSWTRSNMAQERLSGLALMHINRDIVIDVESVINRHVLQEKNLALDRISTPTVQFAPVPANFDYSASNSSGSSNNCSGNNSIEAEANLQAAEALGLDDSLNPSLNLSSSGEKKIYKYQVLYGNQRLSTSLFSQATDKICKVFCNESKEIYFIPYKPKTGYQPKESARGKLWSRYVNVKSALKQANAINIPNTNYPAEYIDEAEDTHAYEVLKFLLEPQTKIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -