Pter104328.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- clz9
- Assembly
- GCA_963920685.1
- Location
- OY987332.1:90533695-90539343[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-10 6.9e-08 35.1 0.0 4 35 32 64 29 72 0.88
Sequence Information
- Coding Sequence
- ATGCTGTTAAATGAAGAGAAGCCAACACTTGGAATCGAACAGTTTGAAGTTGATCCACAAGTAGAAATTTGTGATTGTTGGGAAGAAGACCAGGACTTAGCCAAAGCCTTGCAGAAAATAGAATCTAAAGAGTTATCTCAAAGAGCCGCGGCACGAAAATATAATATTCCGCGGTCCACTCTACAGTTAAATAAAAAACTTGGCGAACTTAAGAAGCCCCATGGAGGCCAGACAGTTTTAACTGCCAATGAAGAAAAATTAATTGTTGAAAATCTGTTAACAATATCCGAGTATGGATTTCCAATTGATCAATATGAATTACGAGTGGTAGTAAAAAGCTATTTAGACAGAAAAGGTGCTAGGGTCCGCAAATTTAAAGATAATATGCCGGGCACTGACTGGACGAAGTcgtttttaaagagaaataaagAACTGACAGTGAGATTTGCTTCTAATATTAAAAATGCGAGAGCAGAAGTATCGTTAGATTATCTTAacaaatattttgataatttggAAAAAGAATTGGAAGGAATTCCCCCAGAAAACATCTATAACTATGACGAAAGTAACCTTACGGATGATCCCGGCAGGAAGCAAGTTATAACCAAGAGGGGATGCAAATATCCTGAGAGGATAATTCACTCTTCTAAATCTTCTACGTCAATTACGTTTTGTGGGACTGCAAGTGGCAACCTTATACCGCCATACGTCGTATATCAGGCCAAAAATCTGTGTGATTCATGGACTACTGGAGGACCACAAGGAACACGTTATAATAGAAGCAAGTCGGGCTGGTTCGACGCATCAATTTTTGAGGACTGGTTTTCAAGACTTTTGCTTCCCATTTTAAAAAAGCAAGCTGGAAGAAAAGCGCTGATTGGCGATAATTTATCATCGCATCTTAGCCCATGCGTGATAGATCTTTGCAGGGAAAATGATATTAAATTTATTTGTCTTCCGCCTAACACAACCCACCTAACTCAGCCGCTGGATGTGGCTTACTTCAGACCACTAAAAATGAAGTGGAGAAAAATTATTgaagattataaaaataaatattcgtgTGTTGTCAACAAGTCACATTTTCCAGCTCtattaaaaaatttgatagaaGATTTAAATACCTCTGGTCCCGACGCACTTAAATCTGGATTCACAAAATGTGGTATTTTTCCGTTTGATCGAACTCCAGTCCTGGAGAGGTTGCCAAGTCAAGATAAACAACATCTTCAAAATAAAAACCTGCTAAGCAACTCGCTTTTAGAATTTCTTGAGAAGAAAAGGTACGGCGATGGGCAAGCAAAAGATCCAAAGTTTGTGAAAAAACTAAAATTGGATGTGCTTCCTGGCAAAAGTATTGAAAACAGAGGTGTAGCCGATCCAGGGGAAGGAAGCAGCAAGACGACAAAAAGAAATTTAGATAGAATGTTGCCTAATAAGAAAATAGGCAAACTAGCcagaaaaagtaataaaattaacaaagtttCACAGTCACTAACAGATGACGAAAGTGAATCGTCATTGGATTATACATCTTTGTCAGAAGGGGAGGGCGACGACTGGATGGCACCTCCGTCATCAGAGAGTGAGCCAGAGCTTGATCAACAGTCTGACTATGTTATTgtgaaatatgaaaaaaaatattttcctggaGAGATTCTTAAAAGAAAAGTGAACGAGTTCCTTGTCAAAACGATGGAGCCCTGTGGTGTGCGCTCGTGGAAGTGGCCAGAGAAGGATGACATTCTTTGGTATAAATCAATAGATATTATGGAGAAAATTGCTGCTCCTGTAAAACAAACTTCCAGATCAATTTATGACGTCCcagaaatactcaaatacaaagATTTTTTATATTAG
- Protein Sequence
- MLLNEEKPTLGIEQFEVDPQVEICDCWEEDQDLAKALQKIESKELSQRAAARKYNIPRSTLQLNKKLGELKKPHGGQTVLTANEEKLIVENLLTISEYGFPIDQYELRVVVKSYLDRKGARVRKFKDNMPGTDWTKSFLKRNKELTVRFASNIKNARAEVSLDYLNKYFDNLEKELEGIPPENIYNYDESNLTDDPGRKQVITKRGCKYPERIIHSSKSSTSITFCGTASGNLIPPYVVYQAKNLCDSWTTGGPQGTRYNRSKSGWFDASIFEDWFSRLLLPILKKQAGRKALIGDNLSSHLSPCVIDLCRENDIKFICLPPNTTHLTQPLDVAYFRPLKMKWRKIIEDYKNKYSCVVNKSHFPALLKNLIEDLNTSGPDALKSGFTKCGIFPFDRTPVLERLPSQDKQHLQNKNLLSNSLLEFLEKKRYGDGQAKDPKFVKKLKLDVLPGKSIENRGVADPGEGSSKTTKRNLDRMLPNKKIGKLARKSNKINKVSQSLTDDESESSLDYTSLSEGEGDDWMAPPSSESEPELDQQSDYVIVKYEKKYFPGEILKRKVNEFLVKTMEPCGVRSWKWPEKDDILWYKSIDIMEKIAAPVKQTSRSIYDVPEILKYKDFLY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242079;
- 90% Identity
- iTF_01242057;
- 80% Identity
- -