Pter078164.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987330.1:100635170-100635769[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-10 6.1e-08 35.3 0.1 2 40 19 57 18 61 0.93
Sequence Information
- Coding Sequence
- ATGCCGAGAAAACATTTTCACAAGTTAGGAACGCCGTATCGGCGCAATTATTCGCAAGAAGCTATGGAAAGGGCATTGTTGGCAGTGGTAGACCACCACTACTCATTTCAGCAGGCAGCAGAAATGTACAGTGTCCCAAAAAGTACACTATATGATGTATATAGAGGTCAGCATTCTGACAAACTCGGGAGGCCCCCAATTTTGTCTGTGGTTGAAGAGCGTTGGATAGTAGATGCCATGACTACTGAAGCAAAATTTGGATATCCTTTTGAGAGGCAAGCAATCAAGGACTTCGTGCGCCATTATTTAAATAGTAAGGGCGTAAGTATACAATGTTTCGAAGATAATAGACCGGGCGATGACTGGATTGATCATTTTATGGGGCGGCACAAGGAGTTATCACTCCGAAACTGTGAAAATATTAAACGAGTGAAAGCTGATATCACAGAAGATACGATTAGAGAATATTTTGTGCACTTGACCGAGACAGTTCAGGGGGTTCCACCTGAAAATATTGTTAATATGGATGAAACAAACCTGACAGATGATCCCGGTAAGAAACTAGTTTTTATTCCTCGCGGAGAAAAGCACGAAGAATAA
- Protein Sequence
- MPRKHFHKLGTPYRRNYSQEAMERALLAVVDHHYSFQQAAEMYSVPKSTLYDVYRGQHSDKLGRPPILSVVEERWIVDAMTTEAKFGYPFERQAIKDFVRHYLNSKGVSIQCFEDNRPGDDWIDHFMGRHKELSLRNCENIKRVKADITEDTIREYFVHLTETVQGVPPENIVNMDETNLTDDPGKKLVFIPRGEKHEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01187014; iTF_00196022; iTF_01242072;
- 90% Identity
- iTF_01242072;
- 80% Identity
- -