Pter042994.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987328.1:52706732-52707082[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-10 2.9e-08 36.3 0.0 1 39 5 43 5 47 0.94
Sequence Information
- Coding Sequence
- atgaccAAGTACACTGAAGAACAAATTCAAAAAGCGCtaaaagccattgataatggaatgCACATTAGGAAAGCTGCTATCGAATTCAAAATACCACGTGCCACCTTACAATTTAGAAGAAGTAATAGGTTTAAAAAAACTGGACATGGTCCTGCCCCAGCTCTTACCGAAGATGAAGAAGCTACACTTGaaggagaaaagaaaaaaagaaaggaCGATGTTTTATACGTTTTATACTCTGTAAAGCATTTTCTAGATATGAAGCCAAGGAAAAATCCGTTTATAAATAACTGTCCGGGGAACGGATGGTACAAATCATTCCTAAGCAGACATCCAGAACTGGCTACATGA
- Protein Sequence
- MTKYTEEQIQKALKAIDNGMHIRKAAIEFKIPRATLQFRRSNRFKKTGHGPAPALTEDEEATLEGEKKKRKDDVLYVLYSVKHFLDMKPRKNPFINNCPGNGWYKSFLSRHPELAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242038; iTF_01242047; iTF_01242055; iTF_01242058; iTF_01242113; iTF_01242052; iTF_01242059; iTF_01242060; iTF_01242061; iTF_01242287; iTF_01242048;
- 90% Identity
- iTF_01242055;
- 80% Identity
- iTF_01242038;