Pter071058.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987330.1:67712601-67714568[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-10 2.4e-08 36.6 0.0 1 39 12 51 12 54 0.93
Sequence Information
- Coding Sequence
- ATGCCAAGAGTCAACACAAAATATAAGAAATGGGATCCTGATCAAATGAAATTGGCTATCAATGCGGTCCGAAGTAAAGAAATGGGGTACCTTAAAGCCTCTAAGCTATTTGCTGTTCCTAAAACAACTTTAGAGGATTACGTTAAACAAACCGATAAAACTCCTGATCAGCTAATTGCAGTTCCGATTGGAAGAAAGCCGATACTTTCTCCTGAATTAGAAGAAGATTTAGTTTCGTATTGCTTGGAAATGGATAGGAGGTTCTACGGAGTCGGTATTCGTGATATTAAAAGACTTGCCTACCAATTAGCCATGAGAAACGGTTTACGTCATCCTTTTTCTCATGAAAGTGGAGCTGCTGGTAAAAAATGGTTAAAAGGGTTCTTCAAACGCCATCCAAATTTAAGTATTAGGAAACCGCAAGGTATCTCAAAAGCGAGAATAAAAGGTTTTACTCCGGAGAACGTTAATAAGTTTTTCGACCTGCTTGAACCAGAAATGGAAAAAATTAATCATAATCCTGCGAGAGTTTTCAACGTTGATGAAAGCGGTATAACAACGGTGCAATCAAAAAATACACGCGTTATATCTTTGAAAGGAAAGAAGCAAGTCGGGGCGGTTACTGCTGCTGAAAGGGGGTCACTGATGACTGTCGTTTTTTGTATGAACGCAGCTGGTGGCTTTGTTCCCCCTTTGTTCGTTTTCCCTAGAAAGAATATGAAAGCTGAGTTGTTAGATGGAGCGCCCCCTGGGTCCATCGCGGCATGTCATCCATCCGGTTGGATTCAACAACACATCTTTACCCAATGGCTACAACATTTCATTCAGTTTGTTAAACCATCCCGTGATGATTCAGTGCTTCTGATACTCGACGGTCACTATAGCCACACTCGAAATATTGACGTTATAGAGATGGCACGAACAAACTACGTTACAATATTATGTATACCACCCCATACATCGCACAAAATGCAGCCTCTAGACCTATCATTTATGTCACCTTTTAAAACCTTTTATTCTCAGCAAATCCAAATGTGGTTGAAGCAAAATCCTGCCCGAATTATCAACTCTTACCAAATTTGTAAGCTAATGTGTCCTGCCTATTTAAAAACTTGCACTGCAGAGATTTCGGTCAATGGATTTCGCAAATCTGGTATATGTCCATTTAACCGGAATAGATTTACTGAACATGATTTTGTTATTGAGAGACAACGAGAGAGGACACCACCACCAGCTATTTTACCAAACAATGAAGAACTTACTCCCCCAAGAGACGTTTTGACTGAACAAAAACAAAATGAACAAACCCCTCCAAAACAGGAAAATGCACTAAAAAGGATTGAGGCACATAAAAAAAATTTCGTAGGATCGGAGGACATCAGCCCATTACCTTGTCATAGTGGCACTTCAGGATCTAATAAAAGGAGAAATCCTAGACAAGGCTCTAGCTATATAATCACCAGCACGCCATACAAAAACGAACTTGAAGTAAGCATGCAAGaacaagagagaaaaaaaaatttgaaagggAAGGGCAGAAAACCAAAACTTAGTTCTGAATTAGTAGAATCCAAAAAAAAGAAGgccgtaaaaaatattaaaacgacaaaaacatcaaaaaaaCAAGTAAAAGGAAAGAATAATTATTGTAGCGATGATGACTCATCAGATTCTGGAAGCGAGCCAGTGTTGGATGACGATTCGGATATGGACGTTGACGATGAGGACACAGAATGTATGTTTTGCAATGGTTTATATTCTGAAGACGCACAAGGCGAGAAGTGGATACGTTGCGTGAAATGCTTTAAGTGGACCCACGAGGAGTGTGCCAATTCTGATAAGAAGAAAAACTATTTGTGTGACTTTTGTctggaaaaatataattttaacaaACTACTCCTAATTTCGGATACTGTATCCGAAATTAGGAGCCtcttttttattttggtaaaaatgtacttattttag
- Protein Sequence
- MPRVNTKYKKWDPDQMKLAINAVRSKEMGYLKASKLFAVPKTTLEDYVKQTDKTPDQLIAVPIGRKPILSPELEEDLVSYCLEMDRRFYGVGIRDIKRLAYQLAMRNGLRHPFSHESGAAGKKWLKGFFKRHPNLSIRKPQGISKARIKGFTPENVNKFFDLLEPEMEKINHNPARVFNVDESGITTVQSKNTRVISLKGKKQVGAVTAAERGSLMTVVFCMNAAGGFVPPLFVFPRKNMKAELLDGAPPGSIAACHPSGWIQQHIFTQWLQHFIQFVKPSRDDSVLLILDGHYSHTRNIDVIEMARTNYVTILCIPPHTSHKMQPLDLSFMSPFKTFYSQQIQMWLKQNPARIINSYQICKLMCPAYLKTCTAEISVNGFRKSGICPFNRNRFTEHDFVIERQRERTPPPAILPNNEELTPPRDVLTEQKQNEQTPPKQENALKRIEAHKKNFVGSEDISPLPCHSGTSGSNKRRNPRQGSSYIITSTPYKNELEVSMQEQERKKNLKGKGRKPKLSSELVESKKKKAVKNIKTTKTSKKQVKGKNNYCSDDDSSDSGSEPVLDDDSDMDVDDEDTECMFCNGLYSEDAQGEKWIRCVKCFKWTHEECANSDKKKNYLCDFCLEKYNFNKLLLISDTVSEIRSLFFILVKMYLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01242017; iTF_01242018; iTF_01242019; iTF_01242020; iTF_01242021; iTF_00195916; iTF_00195918; iTF_00195919; iTF_01242066; iTF_01238547; iTF_01242643; iTF_01242012; iTF_01242013; iTF_01242016; iTF_00195917; iTF_01242639;
- 90% Identity
- iTF_01242017; iTF_01242018; iTF_01242019; iTF_01242020; iTF_01242021; iTF_00195918; iTF_00195919; iTF_01242066; iTF_01238547; iTF_01242643; iTF_01242012; iTF_01242016; iTF_00195916; iTF_00195917; iTF_01242639;
- 80% Identity
- iTF_01242018;