Pter053779.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987329.1:15696627-15698645[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-11 2.9e-09 39.5 0.1 4 39 18 53 17 57 0.91
Sequence Information
- Coding Sequence
- ATGGTCCGGACGTATAAGAAGACCACAAACCAACATTCTTGGTGTTCGAAATCTATGGAAAAAGCAGTACAGAGTGTTGTATCGGGAGAAATGGGATATAAAAAGGCGTCAAAGGCTTATGGCGTTCCACAAACAACCCTTGAACGATATGCCAATCAGCATCGAAGTAATCCTGATAataccatatttaaaaagaagctGGGCCATTATACAACTGTATTTTCCCAACAACAAGAGAACGAACTGGTACTACATATAAAGACAATGGAAGCGAGGTTTCATGGTCTGACTTCTCTTGAATTGAGAAGACTCGCGTATGAGATCGCAGAAAAAAATCAAATAGCTCataaatttaatacaaataagagTCTAGCAGGAGTAGACTGGCTGAAGGGTTTTTTAAAGAGGCACACAGATATTAGCTACAGGAAACCAGAATCTACTTCCGCAGCTAGAGCTATGGGTTTCAACAGAGTGGCTGTTGGAAAATTTTTTGAGCTTTTGGAGGAGGTTTATGACAAACATAAACTAACCCCACATCGTATATTTAATACAGATGAAACAGGTATTTCCACCGTTCCGAAAAGCCACTCCAGGATTCTTGCTTCTACCGGGAAACGGCAGCCGGAACTGCTTGATGGAGCACCAGCTGGATCATGGGGAGAATGCCACGAATCAGGCTGGATTCAAAGCCACCTGTTCGTTCTTTGGGTCAAGAGATTTATAGAATGGTCACATGCCAGCAAAGACGATCCAGTGCTTTTATTGCTTGATGGACATGCAACTCATGTAAAATCAATCGAGGTTATTGATATGGCCCGCGAAAATGGAGTGATCTTGTTGTGCTTCCCATCTCACTGCACCCATCGCCTCCAGCCACTAGACGTTGGGTTTATGAAGCCACTTAGTACCTATTACAGCAATGAGGTCAAAAATTGGCTACGAAACCACCCTGGTAGGGTGGTAGGTCAATATCAGACTGCTGGAATATTTGGAAAAGCTTTTGTTGCTGCAGCTACCATGACAACTGCTATCAATTCCTTCAGAGCAACAGGTATATGGCctctaaataaaaacatattCACCGATGCGGATTTTGCTCCAGCTACAACTACGGACAACCCGGACAATCCAGAAGTTGCTCCTGATTTGCAACATACAAATAACTCACAAAGTTCCTCACGAGCATTATCACCTCTCAATCCTCTGGTACACGAAGAGTTTATTAGTACATTACCTGGGTACCAAACACCCCCACCGACAGAAACCTCAGCCAATCAATCCAAACCAGAACAGACGAGAAATTCTCCTGGACTTCTTGGGCCAAGTACTTCGCAACCTGGATGTTCTTGGATGACGAATAGACCCATTACATCAGCATTCGTTACGACGCCAGAACAAATAATGCCATTGCCGAAGGAAAATAGAACAAAGCAAAGAGCTACCAAGAGAAGGGGAAAGACAGCAATTATAACTGAGTCGCCCTACAAAAATGAACTTATTGCTTTAAAAGAGGCTAAGGAAAAAAAAGAAGCGAAACAACGTAGAAGAAAGGTTACCAAAAATATCGCATCAGATCTTGTTTCTGCAGAAGAGgaccaagtaactaaaaaaacaaaagaaCGCAAAAGAAAAATCACCAAAGCTGTTAAAGAGTCTAAAGGAAAACAGAAGAAAAAAGGAAAGTCTAGTAAAGAAAATACCACTTCAAATACGTCCTCGAGTAATGAAGATGAAGATGATGAAGATGCTAAATGCATTTACTGGGAAGATGATGAGGATGACGAAGCGATTCATATATGTGCTATGTGTGTTGAGGATTAg
- Protein Sequence
- MVRTYKKTTNQHSWCSKSMEKAVQSVVSGEMGYKKASKAYGVPQTTLERYANQHRSNPDNTIFKKKLGHYTTVFSQQQENELVLHIKTMEARFHGLTSLELRRLAYEIAEKNQIAHKFNTNKSLAGVDWLKGFLKRHTDISYRKPESTSAARAMGFNRVAVGKFFELLEEVYDKHKLTPHRIFNTDETGISTVPKSHSRILASTGKRQPELLDGAPAGSWGECHESGWIQSHLFVLWVKRFIEWSHASKDDPVLLLLDGHATHVKSIEVIDMARENGVILLCFPSHCTHRLQPLDVGFMKPLSTYYSNEVKNWLRNHPGRVVGQYQTAGIFGKAFVAAATMTTAINSFRATGIWPLNKNIFTDADFAPATTTDNPDNPEVAPDLQHTNNSQSSSRALSPLNPLVHEEFISTLPGYQTPPPTETSANQSKPEQTRNSPGLLGPSTSQPGCSWMTNRPITSAFVTTPEQIMPLPKENRTKQRATKRRGKTAIITESPYKNELIALKEAKEKKEAKQRRRKVTKNIASDLVSAEEDQVTKKTKERKRKITKAVKESKGKQKKKGKSSKENTTSNTSSSNEDEDDEDAKCIYWEDDEDDEAIHICAMCVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01241867; iTF_01241870; iTF_01241871; iTF_01241872; iTF_01241873; iTF_01241874; iTF_01241875; iTF_01241876; iTF_01241878; iTF_01241880; iTF_01241945;
- 90% Identity
- -
- 80% Identity
- -