Pter091668.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987331.1:89602828-89603823[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-11 1.6e-09 40.3 0.0 3 38 20 55 18 61 0.93
Sequence Information
- Coding Sequence
- ATGCCGAGTATATATAAACGCAAGGGAACGGCGAAACGAGGGAATTGGACATCAGCGGAAAGCCTGCTTAGCGCAATGCAAGCCGTGGCAAACGGCACCATGGGCGTTAATAAAGCAGCTAAAGGGTTTGGAATTCCGAAAACTACATTGAAACGCAGATTAAAGTCTTTCAACAACAATAAAACTAATCGTCTTGGGCCACAGTCTCAACTAGGTGATGAAGCTGAAAACAAATTGGCGACTCACATCCTTAAGCTACAAAATTATGGGTTTGCGCCAGATAGAGATAGTGTTATGAAAATGACATTCGAATTAGCAAACAAGCTTAAAATCAAACACACTTTTAATAATGATAAATGCAAGGCTAAATATGACTGGctcaaattatttttgaatcgcCACCCAGACATTTCAGTCCGCAAAGCCGAGGGCGTTTCTTATTCACGAGCAACAGGTTCATGCAAGGTAAACGTAAGAGATTATTTTCATTTACTTGCTCAAATCTTAGACGATAACGATTTAAATGATAAACCGGGTCACATATTTAATGTAGACGAAACTGGCCTACAGTTAAACAATAAGCCGAGTAAGGTACTAGCTAAGAAGGGATCAAAATGTGTTGCAAACATCACCTCAGCAGAAAGAGGAGAAACAATATCCGTAGTCGCTTGCTGCAATGCCGAAGGAACGCTTTTGCCCCCTTGTTGCATTTTTAAAGGGAAAAATAAGAAAGAAGAATTCTCAACTGGAGTGCCCCCTGGTTCAGTTGTTACGATGTCAGAAAAGTCTGCATATATAATTGCTGATATATTTCTTCATGGGTTGAAAACTCATTTTTGTCCCCGCAAGCCAAGTGGGAAAGTCCTGCTGATCTTAGACGGACATGCTTCGCACACTCACTCCATAAGTGTATTAAAATTTTCAGAAGAGAATGATATCATTCTTTTGTGCCTGCCCGCGCATACAACTCACTTCCTGCAACCGTTGGATCGATAA
- Protein Sequence
- MPSIYKRKGTAKRGNWTSAESLLSAMQAVANGTMGVNKAAKGFGIPKTTLKRRLKSFNNNKTNRLGPQSQLGDEAENKLATHILKLQNYGFAPDRDSVMKMTFELANKLKIKHTFNNDKCKAKYDWLKLFLNRHPDISVRKAEGVSYSRATGSCKVNVRDYFHLLAQILDDNDLNDKPGHIFNVDETGLQLNNKPSKVLAKKGSKCVANITSAERGETISVVACCNAEGTLLPPCCIFKGKNKKEEFSTGVPPGSVVTMSEKSAYIIADIFLHGLKTHFCPRKPSGKVLLILDGHASHTHSISVLKFSEENDIILLCLPAHTTHFLQPLDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01241831;
- 90% Identity
- iTF_01242350; iTF_01241904; iTF_01241912; iTF_01241822; iTF_01241764; iTF_01241834; iTF_01241831; iTF_01241749;
- 80% Identity
- -