Pter092746.1
Basic Information
- Insect
- Polydrusus tereticollis
- Gene Symbol
- -
- Assembly
- GCA_963920685.1
- Location
- OY987331.1:100638274-100646416[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-06 0.00016 24.3 0.0 1 38 18 55 18 62 0.87 2 2 7.9e-08 6.2e-06 28.9 0.0 1 38 509 546 509 550 0.94
Sequence Information
- Coding Sequence
- ATGCCAAGAACATACGCTCGAAAGCCATCGGATAAACCAAGAGGTTTCTATACACAGGAGCAACTAACTATTGCGATAGAAAAAGTACAATCTGGGGAAATTTCTAAACGTGAGGCCGAAAAAAGATATAGCGTTCCTGCACGCACAATTGGTAGGAGAATAAACTCTGTAAAAATGGGAAAAGGAGCGCTAGGGccggaagGGATTCTTGGAAAAGAGAATGAAAGACGATTAGTTGTccatattaaaaatttatgtGCAGCTGGATTTGCTCCTGATCGGAACGCTGTAAGATCTATGGCGTTTCATTTTGCAGAAAAGCTTAAGATTAAGCATACTTTTTCGAAAGAAGATCAAAAGGCTGGCAATCAATGGCTAAGATCTTTTTTGGACAGAAATCCAGATCTTTCCATTCGACAGGCAGAAGGGCTGTCTTTAGCAAGAGCCAAGGGAATGAATCGGGAAGAAGTAGGAaagttttttgaacttttgacCAAAATTTTAACTGAAAATAATTTGATAGATCGACCAGGAAATATTTTTAACATGGACGAAGCCGGTATTCAAATTATAAATAAGCCATCTAAGGTTTTGGCTCCCAAAGGTGCAAAGGATGTCCATGTCTTGACATCTCGCGAACGAGGTGAAAATGTAACCGTAATAGGATGTTGCAACGCTGAGGGGATGTTTCTTCCGCCACTACTAATTTTAAAATGGGTTAATAAAAAACAAGAGTTTGCCGATGGTTTGCCTGCTGGATCTTCTGttgaaatgaacaaaaaatcatcGTTTATTAACTCCCAGATTTTTTTGTACGGGCTTAAAGAACATTTCATTTCTAGAAAGCCACCTGGTAAAACACTACTTATTATGGATGGACATTCATCTCACTGTTCAGATATTGAAATGCTGGAACTGGCCGAGCGAAATGATTTAATCTTATTGTGTTTACCAAGCCACTGCACTCAAGCAATACAGCCATTAGACAAATCCTTTTTCGGTCCCCTTAAGACCTACTGGAATCAAGAAGCGAAAACATGGATGCTGAACCATCCCAGCCGAAATCTGTCGAGATATCAAGTTGGTGAAATTTTGGGAAAAGCGTGGATGCGAGCTGCTACTGCTGCAAATGCCACTTCTGGATTTAAAGGTACTGGCACCTATCCGCTTGATGAAAATGCTAGTCCTGGTAATTTCTTTGCGATATCCGATGGAGCAACAGCAAAAGAAGACCGTAATGCTGAAAATATTTTCCCTCGTGAGGAAACAGAAGAGGAGTCGGATGAAATACCTGTACCTGTACCTCAAAGGGACAAAACTCCAGATCGCCAGTCTAATGTTTCAACACATTTCGATACTAATGAATTCCTAATTCAAGAACTAAATGAAAACCGAGATGAAAACCAAACCCCAATAAAAAGGAGCGATTCTCTGGAGCCCCAGCCAAGTAGCTCAAAGAATTTAGATGACGAAATAACACCCAaaaaaatgggaaaattgtgCCGAAATATCAGAGCTCCGTGGACTCAAGATAATCTAATTTCGGCTTTAAATGCTGTAAGAATGGGTCGGCTTGGCCAACGTGCAGCTGCTACGAGATTTAGAATTCCGAGACGAACGCTTCGAAATCATTTGCAAAGTGGAAAAGACGAAAGAAAATTAGGAAGATCCTCAATTTTAACCCGGGAGCAGGAAAGGGATTTAGTCAAACGAATAATAAGGCTAGCTGAAGTTGGCTACCCTTATACCAAAAGAAGTGTAAGACGACAGGTGTATCGTTTTGTTGAATTAAACAAGATAAAACATAGCTTTAACAAAAATGAAGAAATGGCCGGCCGCGGTTGGACTAAACTTTTTCTGAAGCGAAATCCGGAATTAGCCAATCGGAAAGCACAAAATATGAATCCAGCTCGTGCTCAAAAATTAAATCCGATAATAGTAGGTGACTATTTTACAAAACTCGGAAATACTTTGgataattttggttttaaaaataaaCCTGAACGTATATTCAATATGAATGAAAAGGGGTGTCGTCTCACCATCCATCACCAGCAGACAGTGTTGGCTAGAAAAGGAGAAAAACGTTTGCATCTTGTAGCCCCAGAACATGCAGAGAACGTTACTGTGGTTGGCTGTGTGTCTGCATGTGGATCGGCTATTCCTCCCATGGTTATCTTCAAGGGCAAGAGATTAAAACCAGAGTTCGAAGACAATTTGCCAGCGGGCACATTGGTGGCAATGGCACCGAAAGGCAGTATGACTACCGAACTTTTTGTCGAATTTATCCGTAACTtggcaaaatttaaaattggtggACCGATATTATTGGTCTTTGATGGAGCAAAGTGTCACCTCGACTTTACAATAGTTGAAGAAGCTGATAAGCATGAAATCTCATTGATGTGTCTTCCGAGCAACACAACTCACGAGCTACAGCCGCTTGACAAAGCGGTCTATCGATCGTTTGAAGCGCACTGGGATCAACAAGTGCTCCTTTATTGGGAAAAACATCCAGATAGGGTAATAACCAAGTCAagatttaaccatattttttcgAAAGTATGGTCACGCTGCATGACCAATGAGAATATTATAAGTGGTTTTCGAGCTACTGGGTTGTATCCCTATGATCCATCAGCTATTCCTTCTTCTGCTTTCGCCCCAAGTACTCTCACAGAACGTCCACATAATCTTTCTGATCAAGTTAATTTACTGGAAGACAGTAGTGACAGTGACGATGAATGTTCGCTGGCTGTGCTACAACAACGGCTTAGGGAAAAGAAAAATGACAAGGACATCTTGAATAACTCTTTTCATGAATTGATGGAAACTCCAGACTTAGTGAAAAAGAAAGATGACAAAGCTCCAAGGCGTAAAGCTTTAAATTATAAAGCTCAGATGGTCACAAAAAGTCTGTTTCAGCAAACCGACCAACCCGAACCAAGTACCAGCACAGGCAGCACTTCTACTTTTAAAAGCACAGTGAATAAGCATAATTCATTATGGTACTGTCCACTATGTCAGGAATCCCGTCAAAGCGATATGAGGCGCTGTCTTTGCTGCAATACATGGGCGCACGAAGACTGTTTAGGGTATACACAATCTGATGATGATGACTATATTTGCATCAAATGCGATAACTAA
- Protein Sequence
- MPRTYARKPSDKPRGFYTQEQLTIAIEKVQSGEISKREAEKRYSVPARTIGRRINSVKMGKGALGPEGILGKENERRLVVHIKNLCAAGFAPDRNAVRSMAFHFAEKLKIKHTFSKEDQKAGNQWLRSFLDRNPDLSIRQAEGLSLARAKGMNREEVGKFFELLTKILTENNLIDRPGNIFNMDEAGIQIINKPSKVLAPKGAKDVHVLTSRERGENVTVIGCCNAEGMFLPPLLILKWVNKKQEFADGLPAGSSVEMNKKSSFINSQIFLYGLKEHFISRKPPGKTLLIMDGHSSHCSDIEMLELAERNDLILLCLPSHCTQAIQPLDKSFFGPLKTYWNQEAKTWMLNHPSRNLSRYQVGEILGKAWMRAATAANATSGFKGTGTYPLDENASPGNFFAISDGATAKEDRNAENIFPREETEEESDEIPVPVPQRDKTPDRQSNVSTHFDTNEFLIQELNENRDENQTPIKRSDSLEPQPSSSKNLDDEITPKKMGKLCRNIRAPWTQDNLISALNAVRMGRLGQRAAATRFRIPRRTLRNHLQSGKDERKLGRSSILTREQERDLVKRIIRLAEVGYPYTKRSVRRQVYRFVELNKIKHSFNKNEEMAGRGWTKLFLKRNPELANRKAQNMNPARAQKLNPIIVGDYFTKLGNTLDNFGFKNKPERIFNMNEKGCRLTIHHQQTVLARKGEKRLHLVAPEHAENVTVVGCVSACGSAIPPMVIFKGKRLKPEFEDNLPAGTLVAMAPKGSMTTELFVEFIRNLAKFKIGGPILLVFDGAKCHLDFTIVEEADKHEISLMCLPSNTTHELQPLDKAVYRSFEAHWDQQVLLYWEKHPDRVITKSRFNHIFSKVWSRCMTNENIISGFRATGLYPYDPSAIPSSAFAPSTLTERPHNLSDQVNLLEDSSDSDDECSLAVLQQRLREKKNDKDILNNSFHELMETPDLVKKKDDKAPRRKALNYKAQMVTKSLFQQTDQPEPSTSTGSTSTFKSTVNKHNSLWYCPLCQESRQSDMRRCLCCNTWAHEDCLGYTQSDDDDYICIKCDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -