Ppte051073.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018380.1:12510151-12522950[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0038 0.7 12.6 0.1 2 20 136 154 135 156 0.93 2 19 0.82 1.5e+02 5.2 3.1 1 23 210 233 210 233 0.95 3 19 0.0059 1.1 12.0 0.1 2 23 239 260 238 260 0.96 4 19 0.26 49 6.8 3.6 2 23 269 291 268 291 0.96 5 19 9.9 1.8e+03 1.8 0.1 2 23 353 375 352 375 0.88 6 19 0.062 12 8.7 0.3 2 22 478 498 477 498 0.95 7 19 0.00042 0.079 15.6 1.1 1 23 787 809 787 809 0.96 8 19 0.35 65 6.4 0.9 1 23 838 861 838 861 0.95 9 19 0.57 1.1e+02 5.7 0.3 2 19 867 884 866 888 0.90 10 19 0.033 6.2 9.6 2.4 1 23 927 950 927 950 0.94 11 19 0.28 53 6.7 0.3 2 23 978 1000 977 1000 0.94 12 19 0.0028 0.52 13.0 0.0 2 23 1534 1556 1533 1556 0.96 13 19 0.0051 0.96 12.1 1.2 2 21 1986 2005 1985 2006 0.93 14 19 5.9 1.1e+03 2.5 4.8 1 23 2060 2083 2060 2083 0.93 15 19 7 1.3e+03 2.3 1.4 2 23 2089 2111 2088 2111 0.89 16 19 8.2 1.5e+03 2.1 0.7 2 19 2120 2137 2119 2138 0.94 17 19 0.025 4.6 10.0 0.4 1 23 2150 2172 2150 2172 0.97 18 19 0.099 18 8.1 0.1 1 19 2482 2500 2482 2503 0.94 19 19 0.63 1.2e+02 5.6 4.7 1 23 2556 2579 2556 2579 0.89
Sequence Information
- Coding Sequence
- ATGCAATCAAGattgaCCGATGAATATGATGATATAAAAGCTGAAGCATTATTAGATGATATTGAAGAACATATGTTGGAACTAATATCAGATGACATAGAACAAAAAAGTGAACCAGAAGAAGGCGAATGCTCCAACGAGAGTACGGATGAAACTGTAGAGGAAGTGATtgagcaaaataaaaaaatcgaaattgtTGAGGTCAAGGAAAAAGTAGAGGCAAAGATAGAAAACGTTAAACCTAAGAAAGGAAGAAAGAGAACCTTTAAACGTGATAATCGCTTagattttgataaaatagatTTTAATCGTACTACTGGCAAGTATAACTGGGAGAAGGACAACAATGAATTAGGAGCTGACAAAAAAATCGTGGCATGGAAAGTCATACCCGCCATAAAAATTTATTGCAATCTGTGTGGTGAGGGTTTTTCCAAATACGAAAGTCTGGAGAAGCATATATTcagtttttctaaaaaagaaCACTGTTTTCTATGCAAGCTTTGCGGcaattgtaataataatttgttggtTAATATATACAACCACGCCCGAAACTGTAACAATTTTGCAGCATTTGATTTGGCAGAAAGGGAGTTTGCTAAAGCACACCCAGAGTACATTCAATATCATTGCGACTTTTGCAACAAAGGATTTGCGATATTAcaagaatttttaaaacataaatcaaAGACCCATAGACAAGAATTCATACCTTGTCCCTTTTGTCCGTTTAGATCCAGCAATTGgaatttattatatattcaCATGCGACAACATGCTTTAATTGGTAATGTAGATCTTAAGTGTAACCTGTGCCAGTTACATTTCTATTATCCAATTACATATAAAACTCACATTCATACAATACATGATCAATCGGAGCAGCAAGACATTCTATATCAGTGTTGCTTATGTCCTGCAGTGTTTGTAAATGACATGCAGGAATTTATTGCACATGTACATAGGCATAACAATTATTTCCAATTAGGAGATGGGGAACGGCATAAGataagtataaaaaatggaCGTCCCCTATTATTTTCGAGTAATGTACAATGCCCAACTTGTTCAATGGTTTTTCTTTCTGGAATACAACTTGGACAGCATGAGAGACGAGGACATTCTGATGCTAACGCTTTAATCATTCCAGAtgttaataatacaataaaaggtagaaagagaaaattaaatttaagcaATAAAAGAAAGAATAACAAATCCAAGTGTAATATATGTGGATTGTTTATATCACAATTGCTTTTTTCTAAGCACCAAGCTGCCCACAAAGGAATGGAGGCCCtgcttaaaaataataaccaaaGTGATTTAAGGTCTttggataataaaaaaaatgataatcgGAGACTAGTTGTTTCTACAGACAGAGTTGAAGTTAACCAAAACGTAACCAAAGACTGCGTAATAATCAAGTGCAATAAATGCTCCAtgatatttaatacaattcaaGATTTAGTTAACCACACAAGAAGACGTCTTTGTTCAGGTTTTCCCACATCTAACGTGTTCTCTGAACCACAAAGCTCAACTTTTGTACCTTCCGAAACAATACAGTTGCCTAACTGGGCAAATCCATTAAAGCCTCAAAACCAATctctaacaaataatattacattAAGTGTACATGACCTACATACTGCTAATTTAAGGCCTGGTTCATTAAACAGCTGCGATTTACGGCCTCAAAACCAATCTTCGATGGCTTCTTTATCCATACAGTTACCAAACAACATTTTTCAACATTCTGAAATGTCAACAACTTCTGGAATACGTCCGATAACCATGGAATTACACAATCAGCTTATGCCAAGTATTCATAGACCAGAAAATTTATCTGTTAGGCCCTCAGCTAGACCTCATTCGTTTGGATCTCCCAGTCCCTATTTATATCAGCCGCCGACAAATATACCTCAAATTATTCAGCGTCCTGGTGATATGTTAAATCAGGATGCCATTCATCGTGATCAGCTGGGGTTTCGTTTTGAACCACCCCAGCATCAtttaagtATTGCAAGCGAAGACTATGACGAAGAAATTTTGgcaattttaaatgacattGAACAGTGCTATAATTATGACGATGATGAAGGCTCTTTAGATGACAGCGATTTGGAGGAAGGAGAATGTTCGGACAATATTTCAAAGGTCACGAAAAACGAAGAACTAGATAAAACCTTAGATGGTGGTCAAAATACAGAAGACGGCCATTGTCGTAATTTTATTACTTGGAATGACGAACTAGATGATAATTCCGAAGTTGgcgaaaatatagaaaattgcGATATGCTCACTTCTAAAATTTATGACTCTGTAACAAATAAGTGGATTGCGCAACTATTTTACTGTTGGGTATGCCGTAAAGTCTTTGACGATCTTTTTAACCTCACCAAACATATTTCTTTTCACAAGGCATTTCCTAGTCGGCTGACCGTGAACATATTCTTAGTTCAGAAAATACATAATTCTAAAACAAAACCGTCATCTGTTCAGTATAATTGTGACTATTGCATTAAGGGATTTCCACAGTTGCAAggtttatataaacataaaaattaccaaCATTCTTTCGAGTTCGTTCGTTGTCCTATATGTTCGAAACTATTTCGAGACACTGCGCTTTTTTTTTACCATGCTCCAAAGCATTCGTTAATTGGAAATGTGGATCTCGAATGCAAGGAGTGCgctttacatttttattctcCTTCCGTGTAcaaattccatttttttctgGTACATTCTCAAACCAAGGACGTTACTTATCAATGTTGTTTGTGCCCTAAGGCGTCGTTTAATGATCAAAGCCAACTTAGAACCCACATTTTCTCTCATGGAATTGTTAATAGGGAGCTATTTAAGGTCAACGAGATTGCTATGAAGAACGGTAGACCATTACAAGATGTCGCCCGCACTTCTTGCGCCATTTGTGCCAAAATCTTTTTTACTGAGATTGGGCTCAACCGGCATAAAACTCGCGATCACCCCAAACATCCTAAAATAGATGTATATTCAACCCATCAAATAGAGCTCGGCAAAGTTGCTAAACATAAAGATAATTCACAGCTAAATCTAAGAGGGGTAGCTCAGGATCAGGACATTACGGAAAATACACCAAATCCCAgtaagagaaaaaagaaaaagcgaaaaaaagaaaaaatattagaacAGGATACGGTAAATAGAATGTCAGGTGAAGTAGCGGAATGGTCTAACCAAGCAGAAGAAGAGTCTCAATACACAAATTCTGAATCGTATCCGAAAGTGCCGTGGTGTGCTGTAGGAAAACAAGAATTCAAAATTCAACACAAAGTTAATGAAAAAGGGTATGAATCAGAAAATGCTGAATCATATCAGACAAAAGTAGCTTACGCTCAACAACATCGCTACAAAAtccaagaaaaaaaagaaagaaaaattaagcaaataagaaagaaaattaaatcTACAAACAAATCAGTTGAACTGCCTTCTGATACTGGCCGACAAAATAAATTAGTAATCAAAATTCccgagaaaaaagaaaagcgtGTGGAACAGATAAAAAAGGATTCTCAACCTCTAAAATCGCCGTCATATCAATCAATGCCAAGTTACACTAAACAACAGCATAGCAAGGTATCTAAAACCCAATTGGAAAAAGGTTTGGAGCAGATGAAAAGAAAATCTCAACTACCAAATTTACTATCAGAAAAGGGAGCAAAACTATCTGACCCAGAGTATGAGAGAGTCATTAAAATTTCagagaagaaagaaaaaactgctGATCAGAGAAAAAACGAGTCACAACTTCTGAGATCTCAATCTGAGCTACCATGTTATACGGAACGGCAGCTTAGAAAAGAATCCGGAAGACAATTGGAAAAAGAAGGGCTTGAGCAGGTAACAAGAAAATCTCAGCTCCTAAATTTAGAATCAAAAAATACAACCAAACTACCTTGTTATATTGGCAGACAATACGAAAAAGTTACTACAAGTCTAGAGAAAGATAAAATCCAAATGGAGTCTCAAACTCTAAATTTGTCACCTAATCAATCAAAGGTACTGTGTTACAAACAGGAGCTTAAAACAGAATCTCAAATCCAATTGGTACAAGAAGGGCTTGATAAAGAAGAAAGGAAATCCCAagtccaaataaaattaaatttattatcaaCAAAGACAAAACCAtattatacaaaactaaaacaacTTGAGAATGAATCTAAATTtgagcaaaataataaaaagtgctTCGAACCGCCGGAAAATATGTCTCAAATTATTGATTCGCCCACGatcaaattattatataatgcTAAACTGCAACACGAGACGgactcaaaaaatcaaataaaacaaaacaaagagATCGAACAAACAACCAAAGAAACCTTTTCTACAACAGAAGCTCAACAAGCCTCTATAACAACGCAAAATAAGACCACCCAAAAAAAAGAAGACAAAAAGGTCGAACAAGCAAACAAAGATGTTACAAATTCCACATCACAAGTAGTAAAACTTCCAtgtataaaatgtaaaattgttATTCCTATTCAGGAATTCGAAACCCACCAAGCTTCGCATAAGCAGGCTAAAGAAATTAAATGTACCGAATGTGGAATGCCTTTCGACACCGTCGAAAATCTCGTTGGTCATTTGAAATCTCTTCACTTTTTAGCCGGTTCTGCTATACCCAATCAAATGTATCAATACCCTATGTCTATGCAAATGAATCCATGCTTCATGCCTGCTCAGTATTTTGGCTTTCCTGGTATGGGACAGTCGCCGCTCGAACCACAGGCGTTCAACAAGTCACAGATATCTGATCAATCAAATTATGTTCAAATGAATTGGAATCAACTAAATCAGTATAGCTACCCTCTTATGACAACACAGATAATTCAAAATATGAACAATCCTCCACCGCCGCCCCCGTCCCCGACTGAAAGCGCAAATCGGCAGATTACCAAATTTAACattagtcaaaataaaaataagattacAGATATCGTTCCTAAAGATAAAAATGTATCTTCCCTTGAATGCAGTCCAGGATTTAGGAAAAAATCTAGATCGCCAGACAAATTGGGAGCTTACGACAAATCTTTTCGATATAAAAGGTCCTATGTCAGTCCAGACACGGAAAGATCAAATAAATATAGCTCGTCATATATGTCTGACAGATCTCGTGATTATAACAACTATGGCAGtggtcaaattaaaaataagattaCAGATATCGTTCCTAAAGATAAAAATGTATCTTCCCTTGAATTCAGTCCAGGATTTAGGAAAAAATCTAGATCGCCAGAAAAATTAGGCGCTTACGACAAATCTTTTCGATATAAAAGGTCCTATGTCAGTCCAGACACGGAAAGATCAAATAAATATAGCTCGTCATATATGTCTGACAGATCTCGTGATTATGACAACTATGACAgtggtcaaaataaaaataagattacAGATATCGTTCCTAAAGATAAAAATGTATCTTCCCTTGAATTCAGTCCAGGATTTAGGGAAAAATCTAGATCGCCAGAAACATTACGATCTTACGACAAATCTTTTCGATATAAAAGGTCCTATGTCAGTCCAGACTCGGAAAGATCAAATAAATATAGCCCGTCATATATGTCTGACAGATCTCGTGATTATGACAACTACGACAGATATTGTGATCGGAAATACTCCTATCGCCGTAGCAGATCACCAAGTTATGAAAGGTCTTACAAGTACAATTCTGGTAGGTATAGATCTCGCAGTCGGTCACCAAGgtttaacaataaaaatcaaGCTTTGTGCAAATATGGAAATATACCCAACACAAGTACCAACAGTGGACAAAGCATTTCTAAGGCTTCTCAACCAAGTGACAATAAATCAAAGGGATCAGATACCGAGTTTGTTCAAAAAGTCGATCGCAACAAACGCTACGATTTAGGGGTACCAAAGATGTATTGCAATTCTTGTGGAAAATGCTTCACGCAATATTTTGAGTTCGAAGACCATATTCTTTCTATACCTAAAGAAAACCACTGCTTTGTTTGTCGTGTATGTGGGAGAAATGACATATACTTGCCAGATCCGTTCAGAAATCATGCTCGTCGGTGTCCTAATTACAACGTTTTTGATGCTGCAGAGCGGAAATATTCCGACTCAAATCCGAATTACTCTCAATATTATTGCGAgttttgcaataaaaaatttgcGTGCATGAGTGACTTTTATGATCATAAGAATAAAGTCCATAAAGTAGTCGTTCTTCGTTGCCCTATGTGTCCAAAAACACATAGCGATCTTAATAGTTTATATTTTCATGTAAGATCATTCCATGCCACCATAGCTACTATAAGCATTAAATGTGAACAATGTTCTTTGGATTTTTACAGTCCACATGTTTACGAGAAACACTTTTGGAAAGTGCATAATCAGATGGACGGGATCGTTTATAAGTGTTTCTTGTGCTCTGAATCTTTTGAAGATCCAGATAGTTTAATATTTCATGTTCAGAAACATAAAATGTACAACACAGAAACTTTTTGCGAAGATAAAATAGCAAGGAAAAACGGTCTTCCTTTGATCAACGTCGTATCGCGACAGTGTCCAATTTGTTCAGAATTATTATTAACCGTTAACAAGCTTAGAGAACATAAAAAGCGTCTTCATCCTGATTTCTTGCTAGATCTTAAAAAACCCcgaacgcaagtaaagaaaaagAACGTTAAACGCCAGAAAATGGATAATTGTCCTGTTTGCAACGTACAAATTTCTAAAAGTGCTAGACAAGCGCATTTAAATTCTcacaaacctaaaaaaaaaggttatatgCATCGTTTGCAACAAGGCGACCAACATTGCATGCCAGGAATTTCATCAGTCCAATCAATTACTACGGACCCAAACTTACCAAGTCTATTTCCTGCTCGTGGTTTAAATCAACCATCCAATGTGGCTTCTCAAAGTAATTGGAACCGAAATATTTATGACTCGGATCAAATATCGCAACATAACAATCCACCGGCATCACAACAACCAAGGGAAAGTATTGGCAGTAACGAATTTAATGATGAGCTTATAGCAATACTGGAAGGAATTGAACAAGATTATGATGAAATCTCAGATGAAGTAATACGTAAAGAAGATAATAAAGAACCTATAAAGGTTGATCCTaaatatgataaaattttagATTCTCATGCAGAAAAAAAAGAAATCAATACGACTTCAAACAATGGAAAATCAGAGGAACAAAAGAAAGACCATAATGTGGATGATGATGAAGATTATATTGAATATGATGCAGTTTATAAAGACCTTGGTTTATCTTCTGGAGATGAAGATAATAGAGATATTGACGAAAAACATGATCACCAAGAATATAACAGAACTTATGAATGTACTAAAAGATATCTTCCTGAAAAGGGTTATTGGATAGTGGACAAATTTTATTGCTACATTTGCGGCGAAGCTTTCGATAAAATTTCTGATCTTGACGCACACTTCACTAATCCCAAAGAGAATCATAGTTTTGTTTGTAGAAATTGTAAGCGTCGGAATTTTTCTAGTGTTTATGCTATTAAGAAACATTATCCCAGATGTCCAAACCCCAAAGCCTTTGACAAAAAGGAGTTTAAGTACTCCATGAGACATCCCAAATTTGCACAATATTACTGTGACTATTGTAACAAATCATTTGCATGTTTAGCAGATTTTTTCAAACACAAAACCCTAAGACATTCACTTGATTAA
- Protein Sequence
- MQSRLTDEYDDIKAEALLDDIEEHMLELISDDIEQKSEPEEGECSNESTDETVEEVIEQNKKIEIVEVKEKVEAKIENVKPKKGRKRTFKRDNRLDFDKIDFNRTTGKYNWEKDNNELGADKKIVAWKVIPAIKIYCNLCGEGFSKYESLEKHIFSFSKKEHCFLCKLCGNCNNNLLVNIYNHARNCNNFAAFDLAEREFAKAHPEYIQYHCDFCNKGFAILQEFLKHKSKTHRQEFIPCPFCPFRSSNWNLLYIHMRQHALIGNVDLKCNLCQLHFYYPITYKTHIHTIHDQSEQQDILYQCCLCPAVFVNDMQEFIAHVHRHNNYFQLGDGERHKISIKNGRPLLFSSNVQCPTCSMVFLSGIQLGQHERRGHSDANALIIPDVNNTIKGRKRKLNLSNKRKNNKSKCNICGLFISQLLFSKHQAAHKGMEALLKNNNQSDLRSLDNKKNDNRRLVVSTDRVEVNQNVTKDCVIIKCNKCSMIFNTIQDLVNHTRRRLCSGFPTSNVFSEPQSSTFVPSETIQLPNWANPLKPQNQSLTNNITLSVHDLHTANLRPGSLNSCDLRPQNQSSMASLSIQLPNNIFQHSEMSTTSGIRPITMELHNQLMPSIHRPENLSVRPSARPHSFGSPSPYLYQPPTNIPQIIQRPGDMLNQDAIHRDQLGFRFEPPQHHLSIASEDYDEEILAILNDIEQCYNYDDDEGSLDDSDLEEGECSDNISKVTKNEELDKTLDGGQNTEDGHCRNFITWNDELDDNSEVGENIENCDMLTSKIYDSVTNKWIAQLFYCWVCRKVFDDLFNLTKHISFHKAFPSRLTVNIFLVQKIHNSKTKPSSVQYNCDYCIKGFPQLQGLYKHKNYQHSFEFVRCPICSKLFRDTALFFYHAPKHSLIGNVDLECKECALHFYSPSVYKFHFFLVHSQTKDVTYQCCLCPKASFNDQSQLRTHIFSHGIVNRELFKVNEIAMKNGRPLQDVARTSCAICAKIFFTEIGLNRHKTRDHPKHPKIDVYSTHQIELGKVAKHKDNSQLNLRGVAQDQDITENTPNPSKRKKKKRKKEKILEQDTVNRMSGEVAEWSNQAEEESQYTNSESYPKVPWCAVGKQEFKIQHKVNEKGYESENAESYQTKVAYAQQHRYKIQEKKERKIKQIRKKIKSTNKSVELPSDTGRQNKLVIKIPEKKEKRVEQIKKDSQPLKSPSYQSMPSYTKQQHSKVSKTQLEKGLEQMKRKSQLPNLLSEKGAKLSDPEYERVIKISEKKEKTADQRKNESQLLRSQSELPCYTERQLRKESGRQLEKEGLEQVTRKSQLLNLESKNTTKLPCYIGRQYEKVTTSLEKDKIQMESQTLNLSPNQSKVLCYKQELKTESQIQLVQEGLDKEERKSQVQIKLNLLSTKTKPYYTKLKQLENESKFEQNNKKCFEPPENMSQIIDSPTIKLLYNAKLQHETDSKNQIKQNKEIEQTTKETFSTTEAQQASITTQNKTTQKKEDKKVEQANKDVTNSTSQVVKLPCIKCKIVIPIQEFETHQASHKQAKEIKCTECGMPFDTVENLVGHLKSLHFLAGSAIPNQMYQYPMSMQMNPCFMPAQYFGFPGMGQSPLEPQAFNKSQISDQSNYVQMNWNQLNQYSYPLMTTQIIQNMNNPPPPPPSPTESANRQITKFNISQNKNKITDIVPKDKNVSSLECSPGFRKKSRSPDKLGAYDKSFRYKRSYVSPDTERSNKYSSSYMSDRSRDYNNYGSGQIKNKITDIVPKDKNVSSLEFSPGFRKKSRSPEKLGAYDKSFRYKRSYVSPDTERSNKYSSSYMSDRSRDYDNYDSGQNKNKITDIVPKDKNVSSLEFSPGFREKSRSPETLRSYDKSFRYKRSYVSPDSERSNKYSPSYMSDRSRDYDNYDRYCDRKYSYRRSRSPSYERSYKYNSGRYRSRSRSPRFNNKNQALCKYGNIPNTSTNSGQSISKASQPSDNKSKGSDTEFVQKVDRNKRYDLGVPKMYCNSCGKCFTQYFEFEDHILSIPKENHCFVCRVCGRNDIYLPDPFRNHARRCPNYNVFDAAERKYSDSNPNYSQYYCEFCNKKFACMSDFYDHKNKVHKVVVLRCPMCPKTHSDLNSLYFHVRSFHATIATISIKCEQCSLDFYSPHVYEKHFWKVHNQMDGIVYKCFLCSESFEDPDSLIFHVQKHKMYNTETFCEDKIARKNGLPLINVVSRQCPICSELLLTVNKLREHKKRLHPDFLLDLKKPRTQVKKKNVKRQKMDNCPVCNVQISKSARQAHLNSHKPKKKGYMHRLQQGDQHCMPGISSVQSITTDPNLPSLFPARGLNQPSNVASQSNWNRNIYDSDQISQHNNPPASQQPRESIGSNEFNDELIAILEGIEQDYDEISDEVIRKEDNKEPIKVDPKYDKILDSHAEKKEINTTSNNGKSEEQKKDHNVDDDEDYIEYDAVYKDLGLSSGDEDNRDIDEKHDHQEYNRTYECTKRYLPEKGYWIVDKFYCYICGEAFDKISDLDAHFTNPKENHSFVCRNCKRRNFSSVYAIKKHYPRCPNPKAFDKKEFKYSMRHPKFAQYYCDYCNKSFACLADFFKHKTLRHSLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -