Ppte051033.1
Basic Information
- Insect
- Polydrusus pterygomalis
- Gene Symbol
- -
- Assembly
- GCA_963969555.1
- Location
- OZ018380.1:12233640-12249227[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.018 3.3 10.5 2.4 1 23 143 165 143 165 0.98 2 20 0.015 2.7 10.7 0.1 3 23 169 189 168 189 0.96 3 20 6.4 1.2e+03 2.4 6.2 3 23 197 218 195 218 0.95 4 20 0.00029 0.053 16.1 0.9 1 23 224 247 224 247 0.96 5 20 0.0035 0.65 12.7 1.4 3 23 255 276 253 276 0.89 6 20 0.0014 0.26 13.9 1.0 1 23 321 343 321 343 0.96 7 20 0.00061 0.11 15.1 1.0 1 23 349 371 349 371 0.98 8 20 7.8e-06 0.0014 21.0 0.2 1 23 377 399 377 399 0.98 9 20 0.00011 0.021 17.4 1.1 1 21 405 425 405 425 0.95 10 20 3.2 5.9e+02 3.4 3.8 3 23 463 483 460 483 0.94 11 20 5.8 1.1e+03 2.5 0.5 1 23 675 698 675 698 0.96 12 20 0.25 47 6.8 0.9 1 21 722 742 722 743 0.93 13 20 0.28 52 6.7 2.4 3 23 1407 1428 1405 1428 0.91 14 20 0.23 43 7.0 0.1 1 20 1433 1452 1433 1454 0.94 15 20 0.13 25 7.7 0.4 1 23 1478 1501 1478 1501 0.88 16 20 3 5.5e+02 3.5 3.9 3 23 1746 1767 1745 1767 0.91 17 20 0.003 0.55 12.9 1.9 1 21 1770 1790 1770 1791 0.96 18 20 0.0029 0.53 13.0 0.4 1 19 1820 1838 1820 1840 0.95 19 20 0.00015 0.028 17.0 1.7 3 23 1932 1952 1931 1952 0.94 20 20 0.29 55 6.6 0.1 1 19 2074 2093 2074 2096 0.94
Sequence Information
- Coding Sequence
- ATGTTGATCGATTGTTTTCTAAAGgtaaatagATCAGAGTTTGATTTGTTGAAATTAGAAGAAGGCGTAGAGGTAGAAATACATGTAAAGTCTCAGGCAGGGGTTGCTTATAAaatagatattattaaaaagaatCGGACGATAGTCGACAACTACAGAAAAGAACAAGCCAGGTTAAAAGAAGAAAAACTCCAGGAGAAAATGCGGTTACGACGAGAAACAAGGGAAAAacttaaacaaacaaaattaaagaaaacgaaGTCAAAAAGTAGAAAGCAAAAAATATTCGTTCAAGAAGAAAGTTCCTTTTTGTGTACCCTGTGCGACAAGCaatatctgtcaaaaaaattgttCGACCTGCACAAGTACTTTCACAAAGTAGAAGCAAAGGAAACTCAACAGAAAATAGATAGTAATAAAAACACATTCGTTTGTAACTTTTGCGAAGCCCATTGTACTTCACCTGAAAAACTAACCAATCACATTGAATCGCATAAAGAAAACTGCAAAGAATGCGAGACAACTTTTGCAAATGCCTTTACTTTGGGCATCCACATGGCCGAGCATGACAAAGACGAAAAGATTTGTTGTCCTTTTTGCGATTACCGGGGAACACTTTCCCACTGCTTAAAAACCCACCTTCTAACGCGacattacaaattaaaaatcttcaGGTGCGAGATTTGCGGAGCCAACTACAGTTCAAAAGTTCATTTGGAAGAGCATACTCGGTTTGTTCACGATAAAATGGAGCCTCATATCTGTATTGTCTGCGGaagaaagtttatttttaaaagcagcCTTAAAAAGCACCAGATTAATGCTCATAGGCCTTTAATCGATGGTGATGTGCCCTCCAACTATTGCATTCTATGTAAAAGAACGTTAAATACTGTAGAAGCATTAAGGAAGCATGTAGAAGATAAACATACCAaggaaaaacctaaaaatactgAAAGGTTTATCTGTGACATTTGTGGCAAAGATTTCTCGCATCGCCAATCGTGGTTACTTCATACTAAAGGTCATAGTGGTCTAAAGCCTTATAAGTGTAAACTTTGCTCTAAGGCCTTTAAAGTTCGAGCCTTTCTTACTGTACACGAAAAAATACACTCTGACGAGAAGCCTTTTTCTTGTGAAGTATGTGGAGCGGGGTTCAAGAGAAAAGAGGGTCTTAGAAGACATTTGTTAACGCATACTGATATCAAACCTTTTATTTGTCCAAATTGTTCGAAGGCTTTTCGAAGGAGAGAACATTTAAGGCTACATTTGAAGTGTTGTAATAAAAAGCATGAGGAAATAGCTGAGACCCTTGAGCAGCGATGCCAAAACGAAGCAACTATTGGCCAAGCGACGCCAATACCCAAAGCAGGTGTGTGTTCATTTTGCTATTTTTGTGGCAAAGAATTTGACGTATCCGAATTCGAAGCGCACAAATGCCGCATACATAACTTCGATTTCCCGGATTCAGTTGAAGAGTCTGAAAAATCTGGAAATGATGATGATTCTGTGGAATTACCAACGGCCCAAACCAACGAAGCCAATTTTGAGTCAACAATCACTCAAAATAATGAAGCAGATTTGAACTCCTCAGCGACACACATAAATAATGTAACCCTGGAGACAGTTGAAAATGGTGATGAAGATAAATTAAGCAAAGTCGAGAGAACAACTCAAAAATCTGATGGGCATAGTTTAGAAAATCAGAATTTCACTTTGGGTCCAAATGTATCATTGAATTTAATAAGCAACAACTTTCCTGTTTATAATCACCCAGGAACGTTTCAGCACGTCGAATCAAGTAATTTGGTTCAAAATGTGGACAGTGGCAACACGTATATGAATCAAAATAGTTGCTCCTCTGAAGCTAGACTCAGTTCGACAAATGCACCAGCCCAAAACATTGATAGcTGTGGAAAGGCACCACCTTCTGAAGAAATATTCTGCGAATTTTGTGGTCTACTAGTATTAAACATAAAGGACCTACAAGCTCATCAACTTATACTCCATGAACTAGAACACTTTTCGTGTTTTCTTTGTGaagataattttaatgaaaCTAACAAGCTGATGATTCATCTCAAAATAGAGCATCGGGAGACGGATGTTGTAAAAGCTGAAGTAAATCATGTTACTATTAGGATGGCTAAAaacaattgtatttattattgtaaCCAGTGTGGGCAGGGCTTTAATCTTATCCATAAGCTTCTGGATCATAAAAGGCAATTAATTAAATTGGGTAAACATTTGTTTGACGAAGAGCTAAATGCCATTGGGAATTATTTGGAAAGCACACAAATAAACAGCGTCCTCACGTTAAGCGCCAAAAGAAAAACAACTGGCgtttttaaaaacgaagaagtagCTGATGGTGCAAAGAAAATGGCCATTATTGATAATAATGCTATCAAGAAACAAGTttcagaagaaaataaaaaggaCAGTCGCACTGAAGCttcaaagaacaaaaataacgaaaatagATTTTTAAACCAAACATCTGTACGAAAAAATAGTGTAGATGCCAAAGCACAAGAACACGAGAATAGATATTctgtcaataataaaaaagtggAAGATCAAAAGGATAATGCAACTATAAGTGATAAAAAGTTCAAACAAAGCTGCAGCAGTTCTAAAAGTAAAACTGCAAAGAATGATGcttctataaatacagaaaaagaCAAAATGCAAAAGACCTCTAGTTTAATTCGCGAAAaagagaataaaaaaattacgaatAAACAACAAATGGTTTTACCAacgattaaaaataaacaaataaaagaaaacaaaacagaCAGCAATACAAAAGCTACTAATAAGAGCTTAAaacaatgcaaaaaaaaatctgaaaatgaaaatgtaaataAGAATATAGAAAAGAAAATTCAATTAAAGGCCAGTTCTAAAAAAGACATAATTAATGATGAAGGACGCGATAACAAAAAGCAAGACGATGACAGACGTTCTAAAAGTTCTAGCTGTACATCTAAAATTATTAGTAATATCGACCATAAGAAAACTGCAgataataagaaaattatagaaAGTAAACAAGATgtttccaaacaaaaaactaGTACTGTTACAAACAAACCGAAACGAGATTTACTAATTGATATTGAATCCATTAAAAGGGGACCAGTTCAAAATATAAAGAATGACCCCAAGACAATGAacaaatataaagaaaaaaatatacttcCTAACGACTTTAAAATTAAGCCATTCAGTGTATTGTTAAAAAGGGAAAAAGTAGAAAACATAACAAGTCAAAGAACAAgtagtaaaattaataaagacaCTAAGCAAGCAAATACAGAGAAGAATGACAAGGAGGCTAGACGTACTAAAATGGTGGATTATAGTGCTAGAAGTAAAGATTCCCTCAAGGCAACCAAGGGTAATGGAAGCGACAGTATTGCCAAGAAAAATGAATCGTTATTCAGAATAGAagaagtaaaagaaaaaaaaatagttaagcGTATTAGTACCGACAGCGTGCAGAATCAAACAATAGATAAAGTCAAGAAATTAAAAGAATCTCTTTTGAAAATGCGAGcaataaaaagtaaacaaacGGAACAGACAGATGAGAgtcataatattaatattgaagCCACATATCAAAAATCAAGTGATAAATTTAAGATCACCTCTGTTGAAAATAAAAGCGTTGTAAAGAAAACGACAgataacataataaaaaatctCCCACAGTGCCGAACAAAAATTATAAGTGAATGCGATATTTTTAGCGTTAACAGAAACGTTGCCGCTGAAccaaagaaaaaattacaatttactaAAGAAAAAAACATGGAGACAATAAAGCAAATCGGTCGAAACAATGGCAATGATAAAGAACATATTAATTATTCCAAGGAAGACGGTTATAGTAAACAAGATTCTAATAGAACTGATTTAAGTATACTAGAGCCTAGTAAAACACAAATAgaccaagaaaacaaaaaaaaattatcactaCAGCAATATAaggacatacggaatattgtgTCACAACAACCTCATACTCTTCCCTATTTAATTGTTACTAAACCTCAGCTTAGTAACCATGCAATGCATATAATTAACGAAGCAGTTCAGGAAATTGAAATTTACAATACGACCCGAGAAAGTGATGCTGCAAAGTTCTCCGATGATGCCGAATCAGAAGTCgaGGTTTCGCAAGAAAACATATCCGCTATATTCTGTGAAGCTTGCGGTTCTCAATGTGAAAATTCAGACCACCTGAAGAAACATATGGCATTTATGCATCAAGGTTTCCATTTTGTTTGTTTCGTTTGTGATCACAATTTTGCAACATTGGATGCTGTTATTAGCCATCAAGTAAAATATAGTAAAGAGAATTTGATGTCAGCCGAGAGTCAATTCTTACGGCGAAGAAAGAGTGCTTTTTATCCCTATTACTGCAATCGTTGTGGAAAGGGCTTTACTTTAATCGATTTGGTAGCCTTACACAAGAAACAAAATCATGATAAGCCGATAAAGAAGGGAAAAAATGGGGTAAAGAAAAAGACCGCTGACGACAAGGAAAAATCTGATCGGATGCAGGATGATAACCAAAAAAAGAAAGACGAGGAAGTTTCTATTATAATAAGTAGTGCAGAAAGTAGTAGACGAAATAGTTTAGACATAACCGAAGATGAGAGAAATTCAGAATATATCTCAAGACATATCATTAACGACATTTCCAATATAAATAAAGAAACAAATTCTTTAACTGAGAAGCATGGTAAAATTGTTACTAGCTCGCCTAAAACACAAAATGATGCCAGTTCAGACTGCCTTATTATcgatttggaaaatataaattctTCAGAAGACTTTGATAAAAGTGGATCATCAAACTTTGTTGATGTTGAGGAGTTTATGAAGGAAAAACAGCAGAAAATCCACAACGaagagcaaaataatgataaaaaagCCGATGTTCCCAAAACCGTTAGGCATATTAAAAGTTTAAGAAATCTCAGAAGCGACGAATGGGATGACGTAGCAAAACAAGTTTCTAATGAACTATCTTTAATGGAGGAAgaatatcttttaaataattctCAGGAAGATATACTAACTATTAAAGACCAAGTATCTATACCAACAGACGAAAATCTTTTGGAAAATTGTCACGAAGATGTGGTTGAaatCTCACCATATGCACAAAAATTCATCAATAAAGGACCAGCCCAAGATACAGCACCTAGTTTTTGTGAAGCGTGTGGCCAGAAATTTTCAAGTAAGGTCCACGCTGAGCATCACTTCTTTCGCAATCACCGACCATTTAGATGCTCAGTATGTGATAAGAGGTTCACATTACTTCATAAACTAATCCAGCATCAAAATTTCAAGTACAAATTACCTACCCTTGAATATGCCGAAAAGGAGTCTTTAAAATTGTTGCTTTCCAAAGAGGTCCCTGAGCATTTTCGATATTATTGCGATGTTTGTGGAAAAGGTTTTAATTATATCTACGACCTAAAATCACATAAGGACTTGGCTTGTTCAGTGAAACCCATAACCACTATTTTATCTGATTCCTTTAACAAGACCATCAAAAATGGATGCGATACCCTTATTAGAAGCGAATATAAGATAAACAAAGACAAAGTAACAGTTACCagtgaaacaaatattttaaagagtATGGATATTAACGTTCGATCTCCCAGTGAAActttatcaataaataaaacatgCATGTCTATTGCACAGAACCATAAGGATATTATAACTACAGATAAAATCAATACACAGATAAAGCCGTCTTGTAAGAGTTGTGGAAAGACTTTTTCACGTTGGCACCTTTTAAATGAGCATAGAGCAGCGCATGGTTGCACCGATAAAAATTCCGAAGACTGTAAAAAATTTAAGGAACAGCCTGATAAATCTTGTAATGTACATTTGGATTGTCAAAAATCCAAGTTGACGGCCACAAGCATGGACGAGAATGTTTCTAAGAAAGCGCCTAATAAAGCCCATTCTTGTCTTACTTGTGGTGTAACTTTCCTTTACACGTGCGAATTAACCTGGCATATATTTAAGGAATGTCCTGCCCTCAAAACAATTAGCCCTCTAGCTTCGGAAGTTTTGAATTTTTCCATTCCATTAGAATTGCCAAGGACTGCAGCTCGAAGTTCTTCTGTGGATATTAAGCAGCCCCCTACTTCTGCATCTGGAGACAATCATAAACCATTTCAATGCCCAATATGTCCAAATAGGGCTTTTATATCAGAAGACGGTCTTAATCAACATTCACAATTTTCCCAAAAACATATTAAACGAGCTAACAGGAAAAAGCAAGTGTCTTCCAAAAATCTTAATTTACCTGTTACCTGTCTAATAACTAAAGAGGATTCAACCACAAATAGACAGGCTGTTGATCTCTCTAATCCTGTATCATATTACAGTAAAGAAAGCCGTCAAGCACAACGTATATTGTCATTTAGAAACAGATCTCGATCGCCTCCTCGAAGTCGAAAAAGGACAGATTTATTAGATCTAAGACGAAGATCGATTGAAAGAGAATTAGAAACAATAATGAAGGGTGATAAAAGtgaaaagaaactaagaaagcCTACGAAGCGTTCACATAAGAGATCAGAAAGTGAAAAACGTAATGTGAAGAAGCCTAGATGCGATGAAAAAGCAGAATCTGTCATGAAGGAGAAAATCAGCAAAGATTCTAAATCTATTCGAAAATTTGAAAACGCGAccaagaacaaaaaaaataaaagtcaaaGAAGATTCCAAAAACATGTTGATAAATCAACAGATGTTAGCGCTTCTAAAAGGAAaaaagaaaatggtgtagaTGATCTTGAAGGGATATACACGTTGAAAGAGGTGCAACAAATATGTCCTTGA
- Protein Sequence
- MLIDCFLKVNRSEFDLLKLEEGVEVEIHVKSQAGVAYKIDIIKKNRTIVDNYRKEQARLKEEKLQEKMRLRRETREKLKQTKLKKTKSKSRKQKIFVQEESSFLCTLCDKQYLSKKLFDLHKYFHKVEAKETQQKIDSNKNTFVCNFCEAHCTSPEKLTNHIESHKENCKECETTFANAFTLGIHMAEHDKDEKICCPFCDYRGTLSHCLKTHLLTRHYKLKIFRCEICGANYSSKVHLEEHTRFVHDKMEPHICIVCGRKFIFKSSLKKHQINAHRPLIDGDVPSNYCILCKRTLNTVEALRKHVEDKHTKEKPKNTERFICDICGKDFSHRQSWLLHTKGHSGLKPYKCKLCSKAFKVRAFLTVHEKIHSDEKPFSCEVCGAGFKRKEGLRRHLLTHTDIKPFICPNCSKAFRRREHLRLHLKCCNKKHEEIAETLEQRCQNEATIGQATPIPKAGVCSFCYFCGKEFDVSEFEAHKCRIHNFDFPDSVEESEKSGNDDDSVELPTAQTNEANFESTITQNNEADLNSSATHINNVTLETVENGDEDKLSKVERTTQKSDGHSLENQNFTLGPNVSLNLISNNFPVYNHPGTFQHVESSNLVQNVDSGNTYMNQNSCSSEARLSSTNAPAQNIDSCGKAPPSEEIFCEFCGLLVLNIKDLQAHQLILHELEHFSCFLCEDNFNETNKLMIHLKIEHRETDVVKAEVNHVTIRMAKNNCIYYCNQCGQGFNLIHKLLDHKRQLIKLGKHLFDEELNAIGNYLESTQINSVLTLSAKRKTTGVFKNEEVADGAKKMAIIDNNAIKKQVSEENKKDSRTEASKNKNNENRFLNQTSVRKNSVDAKAQEHENRYSVNNKKVEDQKDNATISDKKFKQSCSSSKSKTAKNDASINTEKDKMQKTSSLIREKENKKITNKQQMVLPTIKNKQIKENKTDSNTKATNKSLKQCKKKSENENVNKNIEKKIQLKASSKKDIINDEGRDNKKQDDDRRSKSSSCTSKIISNIDHKKTADNKKIIESKQDVSKQKTSTVTNKPKRDLLIDIESIKRGPVQNIKNDPKTMNKYKEKNILPNDFKIKPFSVLLKREKVENITSQRTSSKINKDTKQANTEKNDKEARRTKMVDYSARSKDSLKATKGNGSDSIAKKNESLFRIEEVKEKKIVKRISTDSVQNQTIDKVKKLKESLLKMRAIKSKQTEQTDESHNINIEATYQKSSDKFKITSVENKSVVKKTTDNIIKNLPQCRTKIISECDIFSVNRNVAAEPKKKLQFTKEKNMETIKQIGRNNGNDKEHINYSKEDGYSKQDSNRTDLSILEPSKTQIDQENKKKLSLQQYKDIRNIVSQQPHTLPYLIVTKPQLSNHAMHIINEAVQEIEIYNTTRESDAAKFSDDAESEVEVSQENISAIFCEACGSQCENSDHLKKHMAFMHQGFHFVCFVCDHNFATLDAVISHQVKYSKENLMSAESQFLRRRKSAFYPYYCNRCGKGFTLIDLVALHKKQNHDKPIKKGKNGVKKKTADDKEKSDRMQDDNQKKKDEEVSIIISSAESSRRNSLDITEDERNSEYISRHIINDISNINKETNSLTEKHGKIVTSSPKTQNDASSDCLIIDLENINSSEDFDKSGSSNFVDVEEFMKEKQQKIHNEEQNNDKKADVPKTVRHIKSLRNLRSDEWDDVAKQVSNELSLMEEEYLLNNSQEDILTIKDQVSIPTDENLLENCHEDVVEISPYAQKFINKGPAQDTAPSFCEACGQKFSSKVHAEHHFFRNHRPFRCSVCDKRFTLLHKLIQHQNFKYKLPTLEYAEKESLKLLLSKEVPEHFRYYCDVCGKGFNYIYDLKSHKDLACSVKPITTILSDSFNKTIKNGCDTLIRSEYKINKDKVTVTSETNILKSMDINVRSPSETLSINKTCMSIAQNHKDIITTDKINTQIKPSCKSCGKTFSRWHLLNEHRAAHGCTDKNSEDCKKFKEQPDKSCNVHLDCQKSKLTATSMDENVSKKAPNKAHSCLTCGVTFLYTCELTWHIFKECPALKTISPLASEVLNFSIPLELPRTAARSSSVDIKQPPTSASGDNHKPFQCPICPNRAFISEDGLNQHSQFSQKHIKRANRKKQVSSKNLNLPVTCLITKEDSTTNRQAVDLSNPVSYYSKESRQAQRILSFRNRSRSPPRSRKRTDLLDLRRRSIERELETIMKGDKSEKKLRKPTKRSHKRSESEKRNVKKPRCDEKAESVMKEKISKDSKSIRKFENATKNKKNKSQRRFQKHVDKSTDVSASKRKKENGVDDLEGIYTLKEVQQICP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -